Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP034943 | 549,144 | 0 | A | C | 24.9% | 257.4 / 34.6 | 170 | Q52H (CAA→CAC) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
Reads supporting (aligned to +/- strand): ref base A (50/77); new base C (0/42); total (50/120) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 3.29e-08 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 183 total aligned reads displayed.
TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAAGAAA > NZ_CP034943/549005‑549283 | ttttAATATAACTCTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTAAAACAAAACATGCATCAGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCAAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCaaa < 2:3357503/140‑1 (MQ=255) ttttAATAGAAATGTGGATATTCCGCTTTATCAGCAGCTTTATGGCTATTTAAAAGAAAACATGCATCCGGGGAGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACACCTGGCGAGTCAGCTTTCCATCACTCaaa < 2:4148043/140‑1 (MQ=255) tttGAATATAAATCTGTATATTCCGCTTTATCAGCAGGTTTATCGCTATTTCAAACAAAACATGAATCAGGGGCTTATTCAAAAAGGAATTAAGCTCCCTTCAAAAATACACCTGGCGAGTAAGCTTTCAATCAGTCaaa < 2:530247/140‑1 (MQ=255) tttaaTAGAATTGTGGATTTCCCGGTTTATCAGCAGTTTTATCGTTATTTAAAATAAAACATCAATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCAAAAACACCCCTGGCGTGTCAGCTTTCCATCAGTCacac < 2:2226837/137‑1 (MQ=255) ttaaTATAAATCTGTATTTTCCGTTTTATCAGCAGCTTTATCGCTTTTTCAAACAAAACATGCATCAGGGGCTTATAAAAAAAGTAATGACGCTCCCTTCAAAAAGACTCCGGGCGAGTCAGCTTTCCACCAGACAAACg < 2:1676187/138‑1 (MQ=255) gAATAGAAATCTGGATATTCCTATTTATCAGAAGCTTTATCGCTATTTAAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGTAATGAAGCTCCCTTCCAAAACACTCGTGGCGTGTCAGCTTTCCATCAGACAAACGa < 2:627485/140‑1 (MQ=255) aaaTCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAg > 2:2928572/1‑140 (MQ=255) cttgATATTCCGATTTATCAGAAGCTTTATCTCTATTTAAAATAAAACATGAATCAGGGGCGTATTAAAAAAGTAATGAAGCTCCATTCAAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACg < 2:11357/137‑1 (MQ=255) cTGTATATTCCGCTTTATCAGCAGCTTTATCGATTTTTCAAAGAAAACATGCATCTGGGGCTTATTCAAAATGTAATGAAGCGCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACAAACGACTGTAGAACg < 1:4077324/140‑1 (MQ=255) cTGTATATGCCGCTTTATCAGCAGCTTTATCGCTATTACAAACAAAACATGAATCCGGGGCTTATTAAAAAAGGAATGAAGCGCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCCGTCACACGACTGTAGAACg < 1:2373893/140‑1 (MQ=255) gtatatTCGGCTTTATATGCAGTTTTAGCGCTATTTAAAAGAAAAATTGCATCAGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCGTGGCGATTCCGCTTTCCATCAGTCAAACGACTGTAGAACGTg < 2:1105055/138‑1 (MQ=255) tatatTCCGATTTATAAGCAGCTTTATCGCTATTTAAAATAAAACATGCATCTGGGGCTTATTAAAAATGGAATGAAGCTCCCTTCCAAAAGACCCCTGGCTAGTAAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc < 2:1919815/139‑1 (MQ=255) gATATTCCGCTTTATCAGCTGCTTTATCGCTTTTTCAAAGAAAACATGCATCAGGGGCTTTTTCAAAAAGTAATTAAGCTCCCTTCCAAAAGACTCGTGGGGTGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc < 2:851370/140‑1 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:1847185/1‑140 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGATCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGCCTCTAGAACGTGc > 1:2542277/1‑140 (MQ=255) tatTCCTCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCt < 2:2372592/140‑1 (MQ=255) tatTCCGCTTTATCAGCAGTTTTCTCGCTATTTCAAAGAAAACATCCATCTGGGGCTTATTAAAAAAGTAATGAAGCCCCCTTCAAACACACTCCTGGCGATTCAGCTTTCCATCACACACACGACTGTAGAACGTGCCt < 2:1760222/140‑1 (MQ=255) tatTCCGCTTTATAAGCAGCTTTAGCGATATTTCAAAGAAAACATGCATCAGGGGCTTATTAAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCTGGCTAGTCAGCTTTCCACCAGTAACACGACTGTAGAACGTGCCt < 2:684131/140‑1 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 2:2160042/1‑140 (MQ=255) cgttttATCAGCAGCTTTATCGCTATTTAAAATAAAACTTGCATCTGGGGCGTATTCAAAAAGGAATTAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:3557138/137‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGaa > 1:2751508/1‑140 (MQ=255) gCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGTGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAAc > 2:891140/1‑140 (MQ=255) ttttATCAGAAGCTTTATCGATATTTCAAACAAAACATGCATCCGGGGCGTATTAAAAAAGTAATGAAGCTCCCTTCCAAAACACCCCTGGCGATTAAGCTTTCCATCTGTCAAACGACTGTAGAACGTGCCTATGAACa < 2:1731105/139‑1 (MQ=255) tATCAGCAGCTTTATCGATATTTCAAATAAAACAGGCATCCGGGGGTTATTAAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCt < 2:808772/140‑1 (MQ=255) tATCAGCAGCTTAATCGATATTTCAAAGAAAAAATGCATCCGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCAAAAAGACTCCGGGCGAGACAGCTTTCCAACCGTCAAACGACTGTAGAACGTGCCTATGGACAGCt < 2:3627444/140‑1 (MQ=255) tCAGCAGGTTTAGCGATTTTTCAAACAAAACATGCAACCGGGGGTTATTCAAAACGCAATCAAGCTCCCTTCCAAAAGCCGCGTGGCGAGTCAGCTTTCAATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:1363410/140‑1 (MQ=255) acaccagcTTTATCGATATTTCAAAGAAAACATCCATCAGGGGCGTATACAAAAAGGAATGAAGCTCCCTTCCAAAAGACACCTGGCGAGTCAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:1024228/136‑1 (MQ=255) acaccagcTTTAGCGCTATTTCAAACAAAACATGCATCCGGGGCTTATACAAAAAGCAATGAAGGCCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:3591084/136‑1 (MQ=255) cgcTTTATCGCTATTTCACACAAAACATGCAGCCGGGGCTTATTAAAAAAGCAAGGAAGCGCCCTTCCAAAAGACTCCGGGCGCGACAGCTTCCCATCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:157302/139‑1 (MQ=255) cgatttATCGATATTTCAAATAAAACCTGCAGCCGGGGCGTATTAAAAAAGTATTGAAGCCCCATTCCAAACGACTCCGGGCGAGTCAGCTTGCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1964325/137‑1 (MQ=255) atcTTTATCGATATTTAAAACAAAACATGCATCTGGGGTTTATTCAAAAAGTAATTACGCTCCCTCCCAAAACACTCCTGGCGAGTAAGCTTTCCAACTGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:108907/138‑1 (MQ=255) aggtttATCGCTATTAAAAACAAAACAGGCATCCGGGGCTTATTCAAAAAGTAATGAAGCTCCCTCCCAAACCCCGCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:11754/137‑1 (MQ=255) agcTTTTTCGATATTTCAAAGAAAACATGCTACAGGGGCGTATTCAAAAATGAATGAAGATCCGTTCCAAAAGACACCGGCAGAGACAGATTTCCATCATAAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:4125937/140‑1 (MQ=255) agcTTTTACGATTTTTAATAGAAAACATGAATCAGGGGCGTATTAAAAAAGGATTTAAGCTCCCTTCAACAAGACTCCTGGCGTGTCTGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2309122/140‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAGACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1735944/140‑1 (MQ=255) agcTTTATCGCTATTTAAAATAAAACATGCATCAGGGGCGTATTAAAAAAGTAATGAAGCTCCCTTCAAAAACAATCCTGGCTAGCAAGCTTTCAATCAGAAAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:2851252/140‑1 (MQ=255) agcTTTATCGCTATTAAAAAGAAAACATCCACCCGGGGCTTATTAAAAAAGCAAGTAAGCTCCCTACCAAAACCCGCCGGGCGAGTCAGCTTACCAACCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:1429503/140‑1 (MQ=255) agcTTTATCGATATTTCAAACAAAACAGGCACCCGGGGCGTATAAAAAAAGTAATGACGCTCCCTACCAAACGCCCCCGGGCGAGTCCGCTTACACTCACACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:985043/140‑1 (MQ=255) agcTTTATCGATATTACAAACAAAACATGAATCCGGGGCGTATAAAAAAAGTAATCAAGCTCCCTTCAAAAAGACCCCGGGCGAGTCAGCTTCCCACCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2928572/140‑1 (MQ=255) agatttATCTCTATTTAAAAGAAAACATGCATCAGGGGCGTATTAAAAACGGAATGAAGCTCCCTACCAAAAGACTCCTGGCTATTAAGCTTTCCAACATTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:3170808/137‑1 (MQ=255) accTTTATCGATATTACAAACAAAACATGCATCCGGGGCTTATTAAAAAAGCAATGAAGCCCCCTTCCAAAAGCCTCCGGGCGAGTCAGCTTACCAACAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3161037/138‑1 (MQ=255) acatttATCCATATTTCAAACAAAACTTGCATCCGGGGGTTATCAAAAAAGTAATGACGCTCCCTTCAAAACGACCCCGGGCGAGTAAGCTTTCCATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1305455/137‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 1:90311/1‑140 (MQ=255) gcTTTATCGCTATTACAAACAAAACATCCCTCCGGGGCGTATAAAAAAAGGAAGCAAGCTCCCTTCAAAAACACGCCGGGCGAGTCAGCTTCCCACCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg < 1:112669/140‑1 (MQ=255) ctttcgcGCTATTTCAAAGAAAACCTGCATCCGGGGCGTATTCAAAAAGCAATGAAGCTCCCTTCCAAAAGCCTCCGGGCGAGACAGCTTTCCACCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:4095022/134‑1 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:3061235/140‑1 (MQ=255) cTTTATCGCTATTACAAAGAAAACCTCCAACCGGGGCGTATTAAAAAAGCAATGAAGCCCCCTTCCAAACCACTCCTGGCGAGTCAGCTTGCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2592122/140‑1 (MQ=255) cTTTATCGATTTTACAAACAAAACATGCATCAGGGGCGTATAAAAAAAGGAATGAAGCTCCCTCCCAAAACACTCCTGGCGAGTCAGCTTTCAATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:787371/140‑1 (MQ=255) cTTTATCGATATTTAAAATAAAACATGAATCAGGGGCTTATTCAAAAAGGAATGACGCTCCCTTCCAAAACACTCGTGGCGAGTCAGGTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2949083/140‑1 (MQ=255) cTTTACCGCTATTTAAAATAAAACTTGCAACAGGGGCGTATTAAAAAAGTAATTAAGCTCCCTACCAAAACACTCCTGGCGAGTAAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2356350/140‑1 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACCGCTTGCTGCTGAggg > 1:157302/1‑140 (MQ=255) tCGCTTTTTCAAATAAAACTTGCATCTGGGGCTTATAAAAAAAGTAATGAAGCCCCCTTCCAAAACACTCCTGGCGAGTCAGGTTTCCATCCGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:777051/140‑1 (MQ=255) tCGCTATTTCAAACAAAACATGCATCCGGGGCGTTTTCAAAAAGTAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCCTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:3835965/140‑1 (MQ=255) tCGCTATTCCAAACAAAACATGCATCTGGGGCGTATTCAAAAAGTAATGAAGCGCCCTTCAAAAACACTCCTGGCGAGACAGCTTTCCATAAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:1231980/140‑1 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCg > 1:368610/1‑140 (MQ=255) aataaaaCATGCATCTGGGGCTTATTAAAAAAGGAATCAAGCTCCCTTCAAAAACACTCCGGGCGAGTCAGCTTTCCATCCGCAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:3430445/137‑1 (MQ=255) aacaaaaCTTGAATCAGGGGCGTATAAAAAATGGAATGACCCTCCCTACCAAAAGACTCCTGGGGAGTCAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:214947/137‑1 (MQ=255) aaGAAAACATGCATCTGGTGCGTATTCAAAAAGGAATTAAGCTCCCTTCAAAAATACTCCTGGCCAGTCATCTTCCAATCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:294611/140‑1 (MQ=255) gAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCaa > 1:563650/1‑140 (MQ=255) cATGCATCTGGGGCTTATAAAAAAAGTAATGAAGCCCCCTTCCAAACGACGCCGGGCGAGTAAGCTTTCCAACAGGCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 1:3817998/140‑1 (MQ=255) cATGCATCAGGGGCTTATTCAAAAAGTAATGACGCTCCCTTCCAAACCACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaa < 2:4167298/140‑1 (MQ=255) aaTGCATCTGGGGCTTATTAAAAAAGTATTGAAGCTCCATTCCAAAAGACTCGTGGCGTGTCAGATTTACATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGATATATCGTGAGCAAGCCaa < 1:3963254/139‑1 (MQ=255) ctgaaTCAGGGGCTTATTAAAAAAGTAATTAAGCTCCCTTCAAAAAGACTCCTGGCGAGACAGTTTTCCAGCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 2:710769/136‑1 (MQ=255) aTGCATCCGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCAAAAACACTCCTGGCTAGTCAGCTTTCCATCCGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 2:710795/140‑1 (MQ=255) ccggggCTTATTAAAAAAGGAATGACGCTCCATTCCAAAACACCCCTGGCGAGTAAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:735677/138‑1 (MQ=255) cAGGGGCGTATTCAAAAAGTAATGAAGCGCCCTTCCAAAACACTCGTGGCGAGTCAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:3374114/140‑1 (MQ=255) aGGGGCTTATTAAAAAAGGAATGACGCTCCCTTCCAAAAGACGCCTGGCGAGTCTGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa < 2:26962/140‑1 (MQ=255) gggCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 2:1903816/123‑1 (MQ=255) gggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc > 1:1903816/1‑123 (MQ=255) gggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGaac > 2:1475062/1‑138 (MQ=255) cGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTCTATCGTGAGCAAGCCAAGAAGCGGATGGtt > 1:3524185/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 1:3883863/1‑81 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATggctgt > 1:1439040/1‑136 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2191343/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:340869/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1031756/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCGGAGGGCTATATCGTGAGCACGCCAAGACGCGGATGGtgtg > 1:1199166/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCGGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc < 2:3883863/81‑1 (MQ=255) aaaaaGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt > 2:3941801/1‑140 (MQ=255) aaaaaGGAATCACGCTCCATACCAAACGCATCCGGGCCTGTAAGGTTGCCATCTGCCAAACGACTGTAGAACGTGCCGATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 1:2312125/140‑1 (MQ=255) aaTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATg > 1:1826159/1‑140 (MQ=255) aaTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATg > 1:4028233/1‑140 (MQ=255) aaTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATg > 1:4229812/1‑140 (MQ=255) aaTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATg > 1:59456/1‑140 (MQ=255) aaGCTCCATACAAAAACACTCCTGGCGAGTCAGCTTTCCATCATACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTc < 2:4229812/140‑1 (MQ=255) ccAACAGACTCCTGGCGTGTCAGCGTTCCAGCAGTCACACGACTGTAGAACGTGCCTATGAACAGCGTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCAAGATTCTGATTTTGCg < 2:353281/140‑1 (MQ=255) aaaaGACTCCTGCCCAGTCAGCTTTCCACCCGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGAGTCTGATTTTGCGTa < 1:3101616/140‑1 (MQ=255) aaaaCACTCCGGGCGATTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTa < 2:970918/140‑1 (MQ=255) gACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGt > 2:3884092/1‑140 (MQ=255) gACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGt > 2:2016278/1‑140 (MQ=255) ccTCCTGGCGAGTCAGCTTCCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTa < 2:3094682/139‑1 (MQ=255) accccTCGCCAGTCAGCTTTCCAACCGACAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCGGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCCTGATTCTGATTTTGCGTATCGTa < 1:1171184/137‑1 (MQ=255) tCCTGGCGTGTCTGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTaaa < 2:3058679/140‑1 (MQ=255) tCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAgcg > 1:2353801/1‑140 (MQ=255) ccATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCa < 2:1402879/140‑1 (MQ=255) aTCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAg > 2:2541293/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 2:4058326/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 1:1932173/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 1:1150279/1‑140 (MQ=255) gTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTCGCGTATCGTAAAATACCAAGCGCATCACCAAGTCaa > 1:3239621/1‑140 (MQ=255) | TTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTATCGTAAAATACCAAGCGCATCACCAAGTCAAGAAA > NZ_CP034943/549005‑549283 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |