Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349431,730,0930GC27.3% 160.8 / 12.1 102E172Q (GAA→CAA) rodZcell shape determination protein RodZ
Reads supporting (aligned to +/- strand):  ref base G (30/42);  new base C (1/26);  total (31/71)
Fisher's exact test for biased strand distribution p-value = 1.65e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 114 total aligned reads displayed.

CGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCG  >  NZ_CP034943/1729954‑1730228
                                                                                                                                           |                                                                                                                                       
cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTACAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGACAAAGAAGATAAAAaag                                                                                                                                         >  1:122575/1‑140 (MQ=255)
cGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaag                                                                                                                                         >  2:3645397/1‑140 (MQ=255)
agCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATAAAAGCAACAGCTCTGAAAAAGAGGCAGACAATAAAAAAGAAACGAAAGAAAAAGAAGATAATAaag                                                                                                                                         >  1:2179191/2‑140 (MQ=255)
  catattaaaaaTCAATTACTAAAATTTAAAGCAATTACTAAATCCAAAAATATTCAACGATAAAATATAATAAAAGCAACAGATATTAAAAATAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       <  2:1190692/134‑1 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAATAAAAAGAAGATAAAAaagaa                                                                                                                                       >  2:2136819/1‑140 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       >  1:3964250/1‑140 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       >  1:707226/1‑140 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       >  2:2802900/1‑140 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       >  2:4045282/1‑140 (MQ=255)
  cATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCGAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGATGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAaagaa                                                                                                                                       >  1:906767/1‑140 (MQ=255)
     cTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAgaagaa                                                                                                                                    >  1:2927850/1‑140 (MQ=255)
          aaaTCATTTCCGCGAAGTGAAAGAAAGTACTAAATCCAAAAAGATTCAACGATAAAACAGAATCAAAGAAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAAGAAAAAGAAGATAAAAAAGAACAAAGCGa                                                                                                                               <  2:808450/140‑1 (MQ=255)
          aaaTCAATTACGCAAAGTGAAAGCAAGTACGACATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGAAACTAAAAAAGAAACGAAATAAAAAGACCATAAAAAACAAGAAAGCGa                                                                                                                               <  2:3154367/140‑1 (MQ=255)
             tCAATTACGAAAAGTGAACCAAATTACCAAATCCCAAAATATTAAACGCAAAAAAATAATCAAAGAAACACAACTGAAAAAGAGCCATACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAg                                                                                                                            <  2:2818788/140‑1 (MQ=255)
                      aaaatttaaaGCAATTACTAAATCACAAATGATTCAACTATAAAACAGAATCAAAGAAACAGCTCTTAAAATGAGGCAGACACTAAAAAAGAAACCAAAGAAAAATAAGATAAAAAAGAAGAAAGCGACAGTGATAAACt                                                                                                                   <  2:2082136/133‑1 (MQ=255)
                       aaattcaaaGAAATTACTAAATCCCAAAATATACAACGCTAAAAGAGAAACAAAGCAACTGCTCTGAAAAAGAGCCAGACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                                                  <  2:1953672/134‑1 (MQ=255)
                       aaaGTTAAAGCAAGTAAGAAATCCAAAAAGATTCAACGCTAAATGATAATAAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAACAGACCAAAGCGACAGTGATAAACTg                                                                                                                  <  2:1659547/140‑1 (MQ=255)
                       aaaGTTAAAGAAAGTACGAAATCCCAAAAGATTCAACGCTAAAACAGAATCAAAGCAACAGCTCTGAAAAAGAGGCACACACTAAAAAATAAACGAAAGAAAAACAAGATAAAAAAGAACAAAGCGACAGTGATAAACTg                                                                                                                  <  2:1819367/140‑1 (MQ=255)
                         aGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTCAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGga                                                                                                                >  1:554007/1‑140 (MQ=255)
                         aGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGAAACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGga                                                                                                                >  1:1680731/1‑140 (MQ=255)
                            caaaGAAACTACCACACCCCAAAACATTCAACGAAAAACGAGAACAAAACCAACCGCTCTCAAAAACAGGCAGACACTAAAAAAGAAACGAACGAAAACGAAGATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGAt                                                                                                             <  2:2557628/139‑1 (MQ=255)
                                gCAATTACGAAATCCCAAAAGATTCAACGCTAAAATAGAATCAAAGCAACAGCTCTGAAAAAGAGGAAGACAATAAAAAATAAACGAAACAAAAAGAAGATAAAAAAGACGAAAGCGACAGTGATAAACTGGAGATTaaa                                                                                                         <  2:3593963/140‑1 (MQ=255)
                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                    >  1:814972/1‑140 (MQ=255)
                                     tACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                    >  2:3878128/1‑140 (MQ=255)
                                     tACGAAATCCCAAAAGATTAAACGATAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAACAAACCAAACAAAAAGAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAAc                                                                                                    <  2:1755254/140‑1 (MQ=255)
                                       cGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTg                                                                                                  >  2:1454412/1‑140 (MQ=255)
                                        taaaTCCAAAAATATTAAACGATAAAAGATAATAAAATCAAAAGATCTTAAAAAGAGGAATAAAATAAAAAATAAACCAAACAAAAACAAGATAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTgg                                                                                                 <  2:2158856/139‑1 (MQ=255)
                                          aaTCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACAGGCa                                                                                               >  2:1174777/1‑140 (MQ=255)
                                              ccAAAATATTCAACTCTAAAAGATAATCAAAGAAACACCAAAGAAAAAGAGGCATACACTAAAAAACAAACTAAAGAAAAAGAACATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGa                                                                                           <  2:2114186/140‑1 (MQ=255)
                                                  aataTTAAACGCTAAAAGTCAAAAAAACCAACACATCTCAAAAAGAGGCAGACAATAAAAAATAAACGAAACAAAAATAAGAAAAAAAAGAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                                       <  2:906767/137‑1 (MQ=255)
                                                  aaGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                                       >  1:2915228/1‑140 (MQ=255)
                                                  aaGATTCAACGATAAAAGAGAATCAAAGCAACAGCTCTTAAAAAGAGCCAGACACTAAAAAAGAAACGAAACAAAAACACGCTAAAAAACAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAggg                                                                                       <  2:707226/140‑1 (MQ=255)
                                                       tCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGCACGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGGGCTTAAAGCCCCTGGCACTGAAGGGTCAtt                                                                                  >  2:3710804/1‑140 (MQ=255)
                                                       tCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                                  >  1:3450933/1‑140 (MQ=255)
                                                       tCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACGGGAGATTAAAGCAACTGGCACTGAAGGGTCAtt                                                                                  >  1:4247822/1‑140 (MQ=255)
                                                          ccgatAACAGACAATCAAAGCAACCGCTCTCAAAAAGAGGCACACACTAACAAACAAACGAAACAAAAACAAGATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:4029775/136‑1 (MQ=255)
                                                          ccGCTAAAAGATATTCAAAGCACAAGATCTGAAAAAGAGGCACACACTAAAAAATAAACCAACCAAAAAGAAGATAAAACAGACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:3837796/139‑1 (MQ=255)
                                                          acgaaaaaacaaaaacaAACAAACACATCTGAAAAAGCGCCAGAAACAAAAAACCAAACCAAACAAAAACAACATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:931126/135‑1 (MQ=255)
                                                          acgaaaaaaTACAATAAAACAAACATCTCTCAAAAAGAGCCACACAATAAAAAACAAACCAAACAAAAACAACATAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:517079/135‑1 (MQ=255)
                                                          acccaaaaaGATAAAAAAACAAACAGCTCTGAAAAAGAGCCACACACTAAAAAACAAACCAAAAAAAAACAAAATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:675083/135‑1 (MQ=255)
                                                          aaccTAAAACAGAATCAAACCAACAGCTCTTAAAAAGAGTCAGACCCTAAAAAACAAACGAAACAAAAACACCATAAAAAAGAAGAAAGCGACAGTGATAACCTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:3497161/137‑1 (MQ=255)
                                                          aCGCTAACACACAATCAAAGAAACACCTAAGAAAAAGAGGCACACAATAAAAAACAACCGAAAGAAAAAGACCATAAAAAAGACCCACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:3994515/140‑1 (MQ=255)
                                                          aCGCTAAAATACAATCAAAGCAACAGATATTAAAAATAGGCAGAAAATAAAAAATAAACGACACAAAAACAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGGAGAATAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:3994461/140‑1 (MQ=255)
                                                          aCGCTAAAACAGAATCAAACCAACACCTATGAAAAAGAGTCATAAAATAAAAAAGAAACGAAACAAAAACACGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:3682937/140‑1 (MQ=255)
                                                          aCGATAAAATACAAAAAAAGCAACAGCTCTCAAAAAGAGCCACACACAAAAAAACAAACCAAACAAAAACAACATAAAAAACAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:2871373/140‑1 (MQ=255)
                                                          aCGATAAAAGAGAATAAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACCAAAGAAAAAGAAGATAAAAAAGAATAAAGCGACAGTGATAACCTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:3339061/140‑1 (MQ=255)
                                                          aCGATAAAAGACAATCAAAGCAACAGCTCTGAAAACGAGGCAGCAACTAAAAAACAAACGAAACAAAAAGACCATAAAAAACAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  2:410341/140‑1 (MQ=255)
                                                          aCGATAAAAGACAATAAACCCACCCCCTCACAAAAACAGGCACACACAAAAAAAGACACCAAACAAAAACAACAAAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAAc                                                                               <  1:3536250/140‑1 (MQ=255)
                                                            gCTAAAATACAAACAAACCAACCCCTCTCAAAAAGAGGCAGACAATAAAAAACAAACCAAAAAAAAAGAAGATAAAAAACAACACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGa                                                                             <  1:3878128/140‑1 (MQ=255)
                                                                  agagAATCACACCAACAGCTCTCAAAAAGAGGCACACAATAAAAAACAAACCAAACAAAAACAAGATAAAAAAGAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                                       <  2:3234314/140‑1 (MQ=255)
                                                                  agagAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                                       <  2:814972/140‑1 (MQ=255)
                                                                  agagAATCAAAGAAACAGCTCTTAAAAAGAGGCAGACACTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATg                                                                       <  2:3425425/140‑1 (MQ=255)
                                                                   cacaaTCAAAGCAAAACCTCTGAAAAACTTGCAGACAATAAAAAACAAACTAAAGAAAACGAAGATCAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGa                                                                      <  1:4201077/137‑1 (MQ=255)
                                                                    agaATCAAAGCAACAGCTCTGAAAAAGAGGCAGACAATAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                     <  2:1081549/140‑1 (MQ=255)
                                                                    agaATCAAAGCAACAGCTATTAAAAAGAGCCACACACAAAAAAATAAACGAAAGAAAAACAACATAAAAAACACGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                     <  2:1510687/140‑1 (MQ=255)
                                                                    agaATCAAACCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAACAAAAAGAAGATAAAAAACAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGaa                                                                     <  2:1509256/140‑1 (MQ=255)
                                                                     gaATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAg                                                                    >  1:608337/1‑140 (MQ=255)
                                                                     gaATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAg                                                                    >  1:579411/1‑140 (MQ=255)
                                                                      aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                                                  >  1:4252001/1‑93 (MQ=255)
                                                                      aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTg                                                                                                                  <  2:4252001/93‑1 (MQ=255)
                                                                      aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                                   >  2:2081454/1‑140 (MQ=255)
                                                                      aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                                   >  2:4117959/1‑140 (MQ=255)
                                                                      aaTCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgt                                                                   >  1:3234314/1‑140 (MQ=255)
                                                                        tCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAgtgt                                                                 >  1:228690/1‑140 (MQ=255)
                                                                         aaaaCCAACCGCTCTCAAAAACAGGCCCACAATAAAAAACAAACCAAAAAAAAACAACAAAAAAAACACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                                                <  1:331325/139‑1 (MQ=255)
                                                                         aaaaCCAACAGCTCTCAAAAACACCAACACAATAAAAAACAAACCAAAAAAAAACACCATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTc                                                                <  1:3468461/139‑1 (MQ=255)
                                                                            aGCAACAGCTCTGAAAAAGAGGCAGACACGAAAAAAGAAACGAAAGAAAAAGAAGATCAAAAAGAAGAAAGCGACAGTGATAAACTGGCGATTAAAGCCACTGGCACTGAAGGGTCATTAACGACTTCTGACGTGTCCgg                                                             >  2:3656942/1‑140 (MQ=255)
                                                                              caacccctctCAAAAACACCCACACAAAAAAAAACAACCCAAACAAAAATACCAGAAAAAACCAGACAGCGACAGTGATAAACTGGAGATAAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGgcg                                                           <  1:1637121/134‑1 (MQ=255)
                                                                                 cacatctGAAAAAGAGGCACACAAAAAAAAACAAACGAAACAAAAACAAGATAAAAAAGAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTg                                                        <  1:1924607/136‑1 (MQ=255)
                                                                                 cAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACGTATGAAGTGTCCGGCGCTg                                                        >  2:2532831/1‑140 (MQ=255)
                                                                                            cagagCCAGACTCTAAAAAAGAAACGAAAGAACAAGACGATACAACAGAAGAAAGCGACAGTGATAAACTGGACATTAAAGCAACTGGCTCTGTAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAg                                             <  2:3152641/139‑1 (MQ=255)
                                                                                             agagGCAGACACTAAAAAAGAAACGAAAGAAAAACCACATACAAAAGACCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGc                                            <  2:3124878/140‑1 (MQ=255)
                                                                                              gagGAATACAATAAAAAAGAAACTAAATAAAAATAATATAAAAAATAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCt                                           <  2:470724/140‑1 (MQ=255)
                                                                                                  catacaaTAAAAAACAAACCAAAAAAAAATAATATAAAAAACAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGaa                                       <  1:1544249/137‑1 (MQ=255)
                                                                                                   aGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAAc                                      >  1:3177476/1‑140 (MQ=255)
                                                                                                      cacaAAAAAATAAAGCAAATAAAAATAAGATAAAAAACAAGAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:1680731/140‑1 (MQ=255)
                                                                                                      cacaAAAAAACAAACCAAACAAAAATACCATAAAAAAGACCAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:3645397/140‑1 (MQ=255)
                                                                                                      cacTAAAAAATAAACTAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:554007/140‑1 (MQ=255)
                                                                                                      cacTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGACAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTGATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:3959166/140‑1 (MQ=255)
                                                                                                      cacTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:2574169/140‑1 (MQ=255)
                                                                                                      caatAAAAAATAAACCAAACAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:2037246/137‑1 (MQ=255)
                                                                                                      caatAAAAAAGAAACGAAAGAAAAACATGATAAAAAAGAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:910262/137‑1 (MQ=255)
                                                                                                      caatAAAAAACAACCGAAATAAACTGAAGATAAAAAACAACAACGCGACAGTGATAACCTGGAGATTAAAGCTACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:3741967/137‑1 (MQ=255)
                                                                                                      caatAAAAAACAAACCAAAGAAAACCAAGAAAAAAACCAAGAACGCGACCGTGATAACCTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:1605080/137‑1 (MQ=255)
                                                                                                      caacaaaacaGAAACGAAACAAAAACAACATAAAACACAACACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:2802900/136‑1 (MQ=255)
                                                                                                      acaaaaaaaaTAAAATAAACAAAAAGAAGAAAACAAACACCCACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:2219204/136‑1 (MQ=255)
                                                                                                      aacTAAAAAATAAACGAAAGAAAAAGAAGATAAAAAAGAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGATGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:3577061/139‑1 (MQ=255)
                                                                                                      aaatAAAAACGAAACGAAACAAAAACAACCAAAAAACCAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:3742004/137‑1 (MQ=255)
                                                                                                      aaatAAAAAATAAACTAAATAAAAACAACATAAAAAAGAACAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  1:1299393/137‑1 (MQ=255)
                                                                                                      aaatAAAAAAGAAACGAAATAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:2887352/137‑1 (MQ=255)
                                                                                                      aaatAAAAAAGAAACGAAAGAAAAAGAATATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGa                                   <  2:770854/137‑1 (MQ=255)
                                                                                                           aaaaaCAAACCAAACAAAAAGACGATAAAAAAGAAGACCGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCa                              <  1:2268742/140‑1 (MQ=255)
                                                                                                                gAAACGACAGAAAAAGATGATAAAAAACACTAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACGGAAGGCATCAGa                         <  2:1131908/140‑1 (MQ=255)
                                                                                                                caaaCTAAAAAAAAATAACATAAAAAATAACAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa                         <  1:2270745/139‑1 (MQ=255)
                                                                                                                aaacacaaaaaaaaacaaaaaaaaaaacaaCAACGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGa                         <  1:1454412/134‑1 (MQ=255)
                                                                                                                 aaaCGAAAGAAAAAGAAGATAAAAAACAAGAAAGCGACAGTGATAAACTGCAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGAc                        >  1:2827777/1‑140 (MQ=255)
                                                                                                                  aaCTAAACAAAAAGAATATAAAAAACAATAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACa                       <  2:1756290/140‑1 (MQ=255)
                                                                                                                   aCGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAg                      >  1:2253048/1‑140 (MQ=255)
                                                                                                                           aaaccaagaTAAAAAATAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGa              <  2:2915228/135‑1 (MQ=255)
                                                                                                                                       aaaaGACGCACGCGACAGTGATACACTGGAGATTAAAGCCACGGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTAcgcg  <  1:2108030/140‑1 (MQ=255)
                                                                                                                                           |                                                                                                                                       
CGCATCTGAAAAATCAATTACGCAAAGTGAAAGCAAGTACGAAATCCCAAAAGATTCAACGCTAAAAGAGAATCAAAGCAACAGCTCTGAAAAAGAGGCAGACACTAAAAAAGAAACGAAAGAAAAAGAAGATAAAAAAGAAGAAAGCGACAGTGATAAACTGGAGATTAAAGCAACTGGCACTGAAGGGTCATTAACGACTTATGAAGTGTCCGGCGCTGAGAAATTCGAGCTCGAACTGAAGGCATCAGACAGTTCTTGGATTCGAGTACGCG  >  NZ_CP034943/1729954‑1730228

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑