| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 619275 | 139 (0.690) | 48 (0.240) | 22/266 | 3.9 | 25.6% | coding (1271/1398 nt) | gmuD | 6‑phospho‑beta‑glucosidase GmuD |
| ? | NZ_CP034943 | 619290 = | 142 (0.720) | coding (1286/1398 nt) | gmuD | 6‑phospho‑beta‑glucosidase GmuD | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
CTTCAGGGATGAACAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/619138‑619275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > NZ_CP034943/619290‑619426 CTTCAGGGATGAACAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCC > 2:508816/1‑140 AACAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTCTCACTTATGGACGTTCATGGACAACTGCCTATAAAACCCG > 2:3018631/1‑140 AACAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCG > 2:2102195/1‑140 CAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTACAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAAGCGAT > 2:2074972/1‑140 CAAGGCATTATTCAAGATGATTACCGGAGTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAAACGAT > 2:777712/1‑140 AAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATA < 1:103058/140‑1 AAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATA < 1:2999686/140‑1 ATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGT < 1:2102195/140‑1 ATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTG > 2:1505724/1‑140 TTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAAT > 2:1921310/1‑140 TTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGT < 2:2185241/126‑1 TTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGT > 1:2185241/1‑126 ATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGAC < 2:1139560/140‑1 ATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGAC < 2:2742575/140‑1 ATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGAC < 2:2988254/140‑1 ATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCCATCTCGAGAAAGACGGAG > 1:2260265/1‑140 TTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGG > 1:528279/1‑140 CGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAAT > 2:157503/1‑140 ATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCT > 2:2035783/1‑140 ATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCT > 2:2434986/1‑140 ATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCT > 2:1578513/1‑140 ATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCT > 2:1577370/1‑140 ATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCT > 2:1309454/1‑140 TCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTG > 1:597581/1‑140 TCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTG > 1:597257/1‑140 TAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAG > 1:2379727/1‑140 ACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCA > 2:853779/1‑140 ACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCA > 2:1323171/1‑140 GTAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAAC < 1:1921310/140‑1 TAAAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACA < 1:2633545/140‑1 AAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACG > 1:287936/1‑140 AAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACG > 1:1948058/1‑140 AAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACG > 1:1948159/1‑140 AAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACG > 1:521749/1‑140 AAAGGGTATCACTTATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACG > 1:811387/1‑140 ATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCC > 2:1610966/1‑140 ATGGACGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCC > 2:2144153/1‑140 CGTTCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAA > 1:493615/1‑140 TCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGAT > 2:1638243/1‑140 TCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGAT > 1:2016979/1‑140 TCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGAT > 2:1433647/1‑140 TCATGGACAACTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGAT > 1:1546482/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAACGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > 1:1846776/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGTTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > 1:1527434/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAACGATCCAGATCTTC > 2:1355907/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > 1:864109/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > 2:2421822/1‑140 CTGCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > 1:1015200/1‑140 CTTCAGGGATGAACAAGGCATTATTCAAGATGATTACCGGATTGAATTTATTAAAGAGCACCTCAAATGGGTTCACCGTGCCATACAGGAAGGATCTAACGTAAAAGGGTATCACTTATGGACGTTCATGGACAACTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/619138‑619275‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgCCTATAAAAACCGATACGGGTTTGTATCAGTCAATCTCGAGAAAGACGGAGAAAGGACCGTCAAAAAGAGCGGAAAATGGTTCAAAAAGGTTGCTGAGCAACACGGTTTCTAGATTTCCCCAAAGATCCAGATCTTC > NZ_CP034943/619290‑619426 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |