BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607179 =	310 (1.550)	12 (0.060) +CGCTCCC	6/256	8.4	4.4%	coding (22/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607837	238 (1.190)	12 (0.060) +CGCTCCC	6/256	8.4	4.4%	coding (680/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 316 total aligned reads displayed.

AGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGG  >  NZ_CP034943/607040‑607318

 gTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCcac                                                                                                                                            >  1:1151306/1‑140 (MQ=255)

      agGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGCCCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAg                                                                                                                                       <  1:2083670/140‑1 (MQ=255)

       gggCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGc                                                                                                                                      >  1:1623202/1‑140 (MQ=255)

        ggCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCCCAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCt                                                                                                                                     >  2:2714131/1‑140 (MQ=255)

          ccGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTAc                                                                                                                                   >  2:258965/1‑140 (MQ=255)

          ccGCAGGGACCACGCGGATTAAGCGGTATCCCAGGAAGTGTTGCAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGTACTGCCGGGAGTCATGGGAGCCACAGGAGATAc                                                                                                                                   >  1:2607617/1‑140 (MQ=255)

                     aCGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCg                                                                                                                        >  2:1634642/1‑140 (MQ=255)

                           aTTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAg                                                                                                                  >  1:1374961/1‑140 (MQ=255)

                            ttACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                                 <  1:1812777/140‑1 (MQ=255)

                               cgcgGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                                                              <  2:76782/140‑1 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                                                        >  1:2910704/1‑140 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                                                        >  2:1383469/1‑140 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                                                        >  1:1741902/1‑140 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                                                        >  2:1207261/1‑140 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGAc                                                                                                        >  1:387380/1‑140 (MQ=255)

                                     aTCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGCGCGAc                                                                                                        >  1:1671913/1‑140 (MQ=255)

                                        ccAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAgg                                                                                                     <  2:800032/140‑1 (MQ=255)

                                        ccAGGCAGTCCTGGAGCCACAGGACCACAAGGACCACAAGGACCACACGGACCCCCAGGACCACACGGACCACCCGGACCGCCGGGAGACAGGGGAGCCACAGGTGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                                     <  2:595553/140‑1 (MQ=21)

                                           ggCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCCTGGGAGCCACCGGAGCTACCGGGGACGCCGGCCCAGCCGGGGCGACCGGAGc                                                                                                  >  2:1780644/1‑140 (MQ=38)

                                           ggCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCGACCGgcgc                                                                                                  >  2:1843927/1‑140 (MQ=255)

                                           ggCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGc                                                                                                  >  1:74225/1‑140 (MQ=255)

                                           ggCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGc                                                                                                  >  1:1020124/1‑140 (MQ=255)

                                              aGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCAc                                                                                               >  1:511617/1‑140 (MQ=255)

                                              aGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCAc                                                                                               >  2:1934897/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGCCCACACGGACCCCAAGGACCACAAGGACCCCAAGGACCACAAGGACTGCCGGGAGTCCTGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCCAccg                                                                                             >  1:1940099/1‑138 (MQ=38)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCCCAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCGAccg                                                                                             >  2:2345081/1‑138 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  1:3074473/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGGGCGACGGGAGCCACgg                                                                                             >  1:880013/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCAccg                                                                                             >  1:1778560/1‑138 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  2:775481/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  2:53117/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  1:2783275/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  1:2772868/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  2:2165389/1‑140 (MQ=255)

                                                tgtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACgg                                                                                             >  1:2110989/1‑140 (MQ=255)

                                                 gtTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACggg                                                                                            <  2:1489821/140‑1 (MQ=255)

                                                     gAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCt                                                                                        >  2:1355497/1‑140 (MQ=255)

                                                      aGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAgg                                                                                                                                         <  1:1192808/90‑1 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACggg                                                                                            <  2:208872/131‑1 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   >  1:771898/1‑140 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   >  2:2008398/1‑140 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   >  2:658043/1‑140 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   <  2:2270943/140‑1 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   >  1:199250/1‑140 (MQ=255)

                                                          acaGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCCACCGGAGCGACAgg                                                                                   >  1:638489/1‑140 (MQ=255)

                                                           caGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTggg                                                                                  <  1:1865112/140‑1 (MQ=255)

                                                            aggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAg                                                                                                                           <  1:1058970/98‑1 (MQ=255)

                                                               accacaaggaccacaaggaccacaaggaccacaaggaccacaaggaccaccaggACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAg                                                                              <  1:2568699/140‑1 (MQ=255)

                                                                   caaggaccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTgg                                                                          >  2:2507830/1‑140 (MQ=255)

                                                                        accacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccag                                                                     <  1:1536404/140‑1 (MQ=255)

                                                                         ccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTgg                                                                                   <  2:1446681/125‑1 (MQ=255)

                                                                         ccacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagc                                                                    >  1:2859587/1‑140 (MQ=255)

                                                                          cacaaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACGGGGGCAGCAggaccagcc                                                                   >  2:2043477/1‑140 (MQ=255)

                                                                            caaggaccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccgg                                                                 >  1:1105296/1‑140 (MQ=255)

                                                                             aaggaccacaaggcccaccacgaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccgga                                                                <  2:21359/140‑1 (MQ=255)

                                                                                  ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccggagcggc                                                           >  1:1593283/1‑135 (MQ=255)

                                                                                  ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccggaccagc                                                           <  1:658043/140‑1 (MQ=255)

                                                                                  ccacaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCACCCGGCGAAGCCggaccgaccggagcccc                                                           >  2:2654821/1‑135 (MQ=21)

                                                                                   cacaaggaccacaaggcccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccagccggaccagcc                                                          <  1:2955801/140‑1 (MQ=255)

                                                                                    acaaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGCCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                     <  2:503610/96‑1 (MQ=255)

                                                                                     caaggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCAACGGGCGAAGCGGGaccagccggaccagccgg                                                        >  2:432708/1‑140 (MQ=255)

                                                                                       aggaccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAg                                                      >  2:1152906/1‑140 (MQ=255)

                                                                                          accacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGa                                                   >  1:443706/1‑140 (MQ=255)

                                                                                          accacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGa                                                   >  1:1109239/1‑140 (MQ=255)

                                                                                           ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGAc                                                  >  2:2559396/1‑140 (MQ=255)

                                                                                           ccacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGAc                                                  >  1:1210562/1‑140 (MQ=255)

                                                                                            cacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAGCCGGAGCGAca                                                 >  1:2189553/1‑139 (MQ=14)

                                                                                            cacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACg                                                 <  1:2392488/140‑1 (MQ=255)

                                                                                            cacaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACg                                                 <  1:1901618/140‑1 (MQ=255)

                                                                                             acaaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCTACCGGAGCGACGGGAGCGACAGGCCCTGCAGGCGAAGCCGTACCACCCGCAGCGAccg                                                >  1:3001899/1‑138 (MQ=9)

                                                                                              caaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACggg                                               <  1:963035/140‑1 (MQ=255)

                                                                                              caaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAACCGGAGCGACggg                                               <  2:387804/140‑1 (MQ=255)

                                                                                               aaggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGa                                              >  2:69628/1‑140 (MQ=255)

                                                                                                aggaccacaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAg                                             <  2:2772868/140‑1 (MQ=255)

                                                                                                      acaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCATCCGGGGCGACAGGAGCCACGGGAGCTCCTGGGGAAGCTGGACCAGCCGGACCAGCAGGAGCTACGGGAGCCACgc                                       >  1:319866/1‑139 (MQ=255)

                                                                                                      acaaggaccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCGACAGGAGCGACCGGAGCACCCGGACCAGCAGGAGCTCCGCGACCAACCTGAGCGACGGGAgaaaacg                                       >  2:2412690/1‑134 (MQ=12)

                                                                                                            accacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACCGGAGCGACCGGAGAGACAGGGGAAGCAGGACAATCCGGGCCACCCGCTCCGACGGCAGCCACGGGCGCTa                                 >  2:1015334/1‑140 (MQ=18)

                                                                                                             ccacaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGcga                                                                                                <  2:1223584/76‑3 (MQ=255)

                                                                                                               acaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTggaccag                                                                     >  1:2702510/1‑101 (MQ=255)

                                                                                                               acaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCg                              >  1:614368/1‑140 (MQ=255)

                                                                                                               acaaggacTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACCGGAGCTAGCg                              >  1:1277012/1‑140 (MQ=255)

                                                                                                                     acTGCCGGGAGTCATGGGAGCAACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAg                        <  1:1986428/140‑1 (MQ=255)

                                                                                                                      cTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGc                       >  2:114854/1‑140 (MQ=255)

                                                                                                                       tGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCt                      >  1:473409/1‑140 (MQ=255)

                                                                                                                        gCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGcc                                           <  1:1297680/118‑1 (MQ=255)

                                                                                                                        gCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGcc                                           >  2:1297680/1‑118 (MQ=255)

                                                                                                                        gCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTg                     >  1:2290539/1‑140 (MQ=255)

                                                                                                                        gCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTg                     >  2:1556957/1‑140 (MQ=255)

                                                                                                                        gCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTAAAGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTg                     >  2:865879/1‑140 (MQ=255)

                                                                                                                          cGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGa                   <  2:2895806/140‑1 (MQ=255)

                                                                                                                           gggAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGAc                  <  1:1424408/140‑1 (MQ=255)

                                                                                                                              aGTCATGGGAGCCACAGGAGCTACCGGCGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCCGACCAGCCGCACCGACGCGAGCCACGGGAGCTACCGGGGAATCTGGACCAg               >  1:2012454/1‑140 (MQ=18)

                                                                                                                                tCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGcc             <  2:299340/140‑1 (MQ=255)

                                                                                                                                   tGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCgg                             >  2:245506/1‑121 (MQ=255)

                                                                                                                                   tGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCgg                             <  1:245506/121‑1 (MQ=255)

                                                                                                                                      gAGCCACAGGAGCTCCCGGTGAAGCCGGACCAGCCGGTGCGACAGGAGACACGGGAGCTACTGGGGAAGCTGGACCAGCCGGCCCAGCCGGAGCCACGGGAGCCACTGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCg       <  1:1355497/140‑1 (MQ=21)

                                                                                                                                        gCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGAc     >  2:895846/1‑140 (MQ=255)

                                                                                                                                          cacaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACgg   >  1:1446/1‑140 (MQ=255)

                                                                                                                                           acaGGAGCTACCGGGGCAGCCGGACCAGCCGGGGCGATAGGAGCCCCGGGAGCTACGGGGGAAGCTGGACCCGCCGGACCAGCCGGAGCGACGGGAGCCACGGCAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg  <  2:168810/140‑1 (MQ=18)

                                                                                                                                           acaGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGCGCGCCGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACggg  <  2:199250/140‑1 (MQ=255)

AGTAAGAGGGCCGCAGGGACCACGCGGATTACGCGGTATCCCAGGCAGTGTTGGAGCCACAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACCACAAGGACTGCCGGGAGTCATGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACAGGAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGG  >  NZ_CP034943/607040‑607318

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.