BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607677 =	149 (0.740)	40 (0.200) +C	15/268	5.5	17.8%	coding (520/1125 nt)	EO946_RS03185	collagen‑like protein
*	?	NZ_CP034943	= 607837	222 (1.110)	40 (0.200) +C	15/268	5.5	17.8%	coding (680/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 149 total aligned reads displayed.

ACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGG  >  NZ_CP034943/607539‑607814

cccGGGGACGCCGGACCCGGCGGGGCCCCGGGAGCCACAGGGGCTACTGGGGAAGCGGGAGCACCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                          <  1:141492/139‑1 (MQ=17)

aCCGGGGACGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCAACGGGGGAACCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                          <  2:68180/140‑1 (MQ=17)

aCCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACTGGGCAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCACCGGGAGCGACAGGAGCGACCAGCGCAGCCGGACCAAACgg                                                                                                                                          >  1:267191/1‑140 (MQ=14)

  cGGGGAAGCGGGTCCCGCCGGGGCCACGGGAGCCACCGGCGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGTGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAg                                                                                                                                        <  2:41898/140‑1 (MQ=17)

      gAAGCCGGACCAGCCGGGGCCACGGGAGCCACGGGGGCGACAGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGATGCCGGACCAGGCGGAGCGACAGGAGCGACCGGCGCACCCGGAGCAACCGGAGCGAc                                                                                                                                    >  2:497887/1‑140 (MQ=18)

      gAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGATGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGAc                                                                                                                                    <  1:3049688/140‑1 (MQ=18)

      gAAGCCGGACCAGCCGGGGCCACGGGAGACACAGGGGCTTCTGGGGAAGCCGGACCAGCGGGTGCGACTGGAGCTACCGGGGAAGCCGGACCTGCGGGAGCGACTGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                                    <  1:652566/140‑1 (MQ=18)

         gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                                 <  2:952111/140‑1 (MQ=255)

         gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                                 <  2:2627037/140‑1 (MQ=255)

         gCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCCGGGAAGCCGGACCAGCCCGAGCCACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAgg                                                                                                                                 >  2:3067656/1‑140 (MQ=255)

          ccGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                                                                                                                <  1:1367381/140‑1 (MQ=255)

           cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                               <  2:1869529/140‑1 (MQ=255)

              aCCATCCGGGGCCACGGGAGCCCCAGGGGCTCCTGGCGCCGCGGGAGCCCCGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                                                                                            <  1:614041/140‑1 (MQ=17)

              aCCAGCCGGGGCCACGGGAGCCACAGGGGCAACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                                                                                            >  1:2947593/1‑140 (MQ=255)

                   ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCACCCGGAGCGACCGGAGCTACCggg                                                                                                                       >  2:2307056/1‑140 (MQ=255)

                   ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACTGGAGCCACCggg                                                                                                                       >  1:2446482/1‑140 (MQ=255)

                   ccGGCGCCACGGGAGCCACCGGGGCTACGGGGGAAGCCGGACCAGCCGGCGCGACCGGCGCTACCGGGGACGCCCGACCACCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                       <  1:100219/140‑1 (MQ=14)

                       ggCCACCGGAGCCACGGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                   <  1:855621/140‑1 (MQ=255)

                       cgCCACGGGCGCAACAGGCCCTACTGGCGAACCCGGAGCACCCGGAGCCACAGGAGCTCCCGGTGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAg                                                                                                                   <  1:567289/139‑1 (MQ=14)

                        gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGc                                                                                                                  >  2:533987/1‑140 (MQ=255)

                        gCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGc                                                                                                                  <  1:2027696/140‑1 (MQ=255)

                            ctggAGCCACAGGGGCTACTGCTGACGCCGCACCATCCGGAGCGACAGGCGCTACCGGGGAAGCCTGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCCGGa                                                                                                              <  2:1975653/138‑1 (MQ=14)

                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                               <  2:2664171/123‑1 (MQ=255)

                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                              <  2:683989/140‑1 (MQ=255)

                            cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                              >  2:528306/1‑140 (MQ=255)

                             gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACAGGAGCTCCCGGGGAAGCCGGAc                                                                                                             >  1:768086/1‑140 (MQ=255)

                             gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                             >  2:956965/1‑140 (MQ=255)

                             gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                             <  1:98617/140‑1 (MQ=255)

                               gAGCCCCAGGTGCTCCCGGGGCAGCCGGACCACCCGGAGCTACAGGAGCTACCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCa                                                                                                           <  1:1749961/140‑1 (MQ=11)

                                           cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCACCAGCAGCGACAGGATCGACCGGGGAACCCGGACCAGCAGCAACGAcc                                                                                               >  2:1528002/1‑139 (MQ=11)

                                            tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAg                                                                                              <  1:3038634/140‑1 (MQ=255)

                                            tACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACCGGCGCAGCCGGACCAACCGGAGCGGCCGGAGCTACCGGGGAAGCCGGAGCACCCGGAACGACAg                                                                                              >  1:260357/1‑140 (MQ=14)

                                             aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGCAGCAGGACCAGCCGGAGCGCCAGGAGCTACCGCGGAAGAAGGACAAGCCGGACCggccgg                                                                                             >  1:1369978/1‑135 (MQ=11)

                                                  ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                                                                                        <  2:358322/140‑1 (MQ=255)

                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGa                                                                                                                                     >  2:1137481/1‑93 (MQ=33)

                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                      >  1:2182714/1‑140 (MQ=255)

                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                      >  1:375084/1‑140 (MQ=255)

                                                    aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCAcg                                                                                      >  1:928548/1‑139 (MQ=37)

                                                      gCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTCCCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCgg                                                                                    >  1:2530804/1‑140 (MQ=14)

                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGGCGGAGTGACAGGAGCTACCGGGGAAGCGGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                                    <  2:2820329/140‑1 (MQ=255)

                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                                    >  2:941178/1‑140 (MQ=255)

                                                      gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGAGCGACAGGAGCTACAGGGGCAGCCGGACAAACCGGAGCGAGAGGACCAACAGGGGCACCCGGAAAACCCGGAGCGACAGGAGCGACCgg                                                                                    >  2:876512/1‑140 (MQ=14)

                                                       ccGGACCAGCCGGAGCGACAGGCGCTACCGGGGTAGCCGGCCGTGCCGTCGCGACTGTCTCTTCCGGCGAAGCCTGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                                   <  1:2227680/140‑1 (MQ=14)

                                                        cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGATACCGGGGAAGCCGGACCAGCCGGAGCTACAGGAGCTACCgggg                                                                                  >  2:2620509/1‑140 (MQ=255)

                                                        cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGATCAACCGGGGCAGCCGGACCAAACGTACCGACAGTAGCGACCGGAGAAGCCGGACCATGCGGAGCGACAGGAGCTACAgggg                                                                                  >  2:362638/1‑140 (MQ=11)

                                                        cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                                  >  1:2099815/1‑140 (MQ=255)

                                                           ccccgCCGGAGCGACCGGCGCCACCGGCGCAGCCGGACCACCCGGCGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                               <  1:2094045/136‑1 (MQ=14)

                                                           cccACCCGCAGCGACCGGCGCTCCCGGCGAAGCCGGACCACCCGGAGCCACAGGCGCTCCCGGGGCCGCCGGACCAACCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                               <  1:744698/139‑1 (MQ=14)

                                                           aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAACCGGAGCGCCAGGAGCCACgggagcca                                                                               >  2:844960/1‑135 (MQ=1)

                                                            ccAGCCGGAGCGACAGGCGCTCCCGGGGCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                              <  1:1090082/140‑1 (MQ=255)

                                                              aGCCGGAGCGACAGGAGCTCCCGGGGCAGCCGGACCATCCGGAGCGACAGGAGCGCCCGGGGACGCCGGACCAACCGGTGCGACAGGAGCTACCGGCGCAGCCGGCGCCGCCGGAGCGACAGGAGCTCCCGGGGACGCCg                                                                            >  1:1951884/1‑140 (MQ=14)

                                                                ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                                                                                                                >  1:736949/1‑86 (MQ=33)

                                                                ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGa                                                                                                                                <  2:736949/86‑1 (MQ=33)

                                                                    aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGCGAAGACGGACCaa                                                                      >  2:1200997/1‑140 (MQ=14)

                                                                     gccccAGGAGCGACCGGTTCACCCGGACCCTCCGGAGCCACAGTAGCGACCGGCGCAGCCGGACCAACCGTAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAAc                                                                     <  2:1736684/136‑1 (MQ=14)

                                                                     gactcAGGAGCACCCGGCGAACCCGGACCAGCCGGAGCCACAGGCGCCACCGGCGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                     <  1:432708/136‑1 (MQ=14)

                                                                     gCGACAGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCCACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCTACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAc                                                                     <  1:1568309/140‑1 (MQ=255)

                                                                              gcgcccGGGGCAGCCGGACCTCCCGGAGCGACAGGCGCTCCCGGGGAAGCCGGAGCTACCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                            <  2:29782/136‑1 (MQ=14)

                                                                              gCTCCCGGGGAAGCAGGACCAGCCGGAGCGACTGGAGCTACCGGTGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                            <  1:1678468/140‑1 (MQ=11)

                                                                               cgccccgggAAGCGGGACGCCCCGGAGCGACAGGTTCTACCGGGGAAGCCGGACCAACGGGAGCGACAGGCGCTAACTGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACg                                                           <  2:224968/134‑1 (MQ=11)

                                                                                 aCCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                         <  1:2372936/140‑1 (MQ=255)

                                                                                 aCCGGGGACGCCGCACCCGCGGGCGCGACCGGAGCAACCGGCCAAGCCGGACCAACGGGAGCGACAGCAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                         <  1:1987047/140‑1 (MQ=14)

                                                                                 aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAATCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                         <  1:1866165/140‑1 (MQ=255)

                                                                                 aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                         <  1:528306/140‑1 (MQ=255)

                                                                                       gAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                   <  1:2619876/140‑1 (MQ=255)

                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGCAGCCGGa                                                                          >  2:1606002/1‑117 (MQ=25)

                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                   <  1:2851876/140‑1 (MQ=255)

                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                                   <  1:864813/140‑1 (MQ=255)

                                                                                       gAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGAAGCCGGACCAGACGGAGCGACAGGAGCTACCGGCGGAGCCGGACCAGCCGGAGCACCAGGAGCTCCAGGGGCAGCCGGAGCATCCGGTGCGGCGGgcgcggc                                                   >  2:1240027/1‑137 (MQ=11)

                                                                                        caGCCGGAGCACCCGGCGCGACAGGCGAGACCCGGGAAGCCGCCCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                  <  1:2922851/139‑1 (MQ=14)

                                                                                        acgCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                  <  1:2765065/138‑1 (MQ=255)

                                                                                          gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                            <  1:445764/128‑1 (MQ=38)

                                                                                            cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAgggg                                              <  1:2800712/140‑1 (MQ=255)

                                                                                               cgccaccGGATCGACAGTCGCCTCCGTGGACTCCGGAGCACCCGGAGCGACAGGAGCTTCCTGGGAAGCCGGACCTTACGGAGCGACAGTAGCTACCGGGGAAGCAGGACCAACCGGAGCGACGGGAGCCTCATGGGCTa                                           <  2:1570840/135‑1 (MQ=255)

                                                                                                 cccccGGAGCGACAGGAGATACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACTGGAGCCACAGGAGCCAca                                         <  1:352460/137‑2 (MQ=14)

                                                                                                   gCCGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTgg                                       <  1:2044466/140‑1 (MQ=255)

                                                                                                    ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACt                                         <  1:1062001/137‑1 (MQ=255)

                                                                                                              cggcgCTACCGGGGAAGCCGGAAGACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                            <  1:1808989/136‑1 (MQ=255)

                                                                                                              aGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                            <  1:2401336/140‑1 (MQ=255)

                                                                                                              aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                            <  1:366531/140‑1 (MQ=255)

                                                                                                              aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGAc                            <  1:3067656/140‑1 (MQ=255)

                                                                                                                  gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                              <  1:1661747/54‑1 (MQ=35)

                                                                                                                          ggATGCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGCGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGa                <  1:886639/140‑1 (MQ=255)

                                                                                                                          ggAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa                <  1:956965/140‑1 (MQ=255)

                                                                                                                          ggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAACCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACGGGGGACGTCGGACCAGCCGGAGCgc                >  2:2700849/1‑139 (MQ=255)

                                                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                  <  2:489666/102‑1 (MQ=18)

                                                                                                                              gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                                  >  1:489666/1‑102 (MQ=18)

                                                                                                                                cGGAGCGACCGCAGCCACCGGCCCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAg          <  1:217425/140‑1 (MQ=18)

                                                                                                                                cGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAg          <  2:2365591/140‑1 (MQ=255)

                                                                                                                                cGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCGACAGGGCACGGCGGACCAGCGGGAGCGGCAGGAg          >  2:1536549/1‑140 (MQ=17)

                                                                                                                                cGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCTACCGGAGCGACAGCGGCGGCCGGACCAACCGGAGCGACGGGAGCCCCAGGGGCTCAGGGGGACGACGCACCACCCGGAGCGCCacgcg          >  2:2957681/1‑136 (MQ=17)

                                                                                                                                cGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCAAAGCCGGTACTGGGGACGACGGACCAGCCGGAGCGACAGGAg          >  2:43233/1‑140 (MQ=18)

                                                                                                                                   aCCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGCCGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGGCGGAGCGTCAGGAGcga       >  2:1397025/1‑138 (MQ=18)

                                                                                                                                   aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCGACAGGGGCTACTGGGGACGTCGGCGCCGCCGGCGCGACGGGTGcgc       >  1:69912/1‑138 (MQ=17)

                                                                                                                                   aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa       >  2:1708018/1‑140 (MQ=255)

                                                                                                                                   aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa       >  2:3065331/1‑140 (MQ=255)

                                                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGCAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCGACTGGCGCCGTAGGACCAGCCGGAGCGACAGCCGCGACCggc  >  2:2547604/1‑139 (MQ=17)

                                                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg  >  1:1929550/1‑140 (MQ=255)

                                                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCggg  <  1:2308801/140‑1 (MQ=255)

                                                                                                                                        ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCAACCGGGGCCACAGGACCAAGCGGAGCGACGGTATCCCCAGGCGCTACTGGGTACGTCGCAGCACCCGGACGGACCGTACCTACCgtc  >  2:28830/1‑138 (MQ=9)

ACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGG  >  NZ_CP034943/607539‑607814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.