Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP034943718,2990CT25.1% 341.9 / 129.1 180intergenic (+325/‑666)rlmD/EO946_RS0370523S rRNA (uracil(1939)‑C(5))‑methyltransferase RlmD/type I restriction‑modification system subunit M
Reads supporting (aligned to +/- strand):  ref base C (56/78);  new base T (18/27);  total (74/106)
Fisher's exact test for biased strand distribution p-value = 8.63e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.27e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 187 total aligned reads displayed.

GATAATGTCCGTCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAAGAG  >  NZ_CP034943/718161‑718438
                                                                                                                                          |                                                                                                                                           
gATAATGTCCGTCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCt                                                                                                                                            >  1:2595676/1‑140 (MQ=255)
         cGTCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCttt                                                                                                                                   <  1:1576706/140‑1 (MQ=255)
           tCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCttttt                                                                                                                                 >  2:227367/1‑140 (MQ=255)
           tCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCttttt                                                                                                                                 >  2:2205810/1‑140 (MQ=255)
           tCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCttttt                                                                                                                                 >  2:401457/1‑140 (MQ=255)
           tCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCttttt                                                                                                                                 >  2:1251283/1‑140 (MQ=255)
              ggTCATTTATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTg                                                                                                                              <  2:1063083/140‑1 (MQ=255)
              ggTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTg                                                                                                                              <  2:2952425/140‑1 (MQ=255)
              ggTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTg                                                                                                                              <  1:2063920/140‑1 (MQ=255)
              ggTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTg                                                                                                                              <  2:288410/140‑1 (MQ=255)
              ggTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTg                                                                                                                              <  1:1331007/140‑1 (MQ=255)
               gTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGt                                                                                                                             <  2:849448/140‑1 (MQ=255)
                  aTTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGa                                                                                                                          <  2:1772721/140‑1 (MQ=255)
                         tCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGAtt                                                                                                                   <  2:1739311/140‑1 (MQ=255)
                         tCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGa                                                                                                                     >  1:780925/1‑138 (MQ=255)
                         tCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGAtt                                                                                                                   <  2:2396199/140‑1 (MQ=255)
                            cTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGtt                                                                                                                >  2:786788/1‑140 (MQ=255)
                              gAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGtttt                                                                                                              >  2:1657849/1‑140 (MQ=255)
                              gAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGtttt                                                                                                              >  2:612749/1‑140 (MQ=255)
                                   tCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAgg                                                                                                         <  1:2395959/140‑1 (MQ=255)
                                    ccATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGa                                                                                                        <  2:2595676/140‑1 (MQ=255)
                                       tcatAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTTCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGatat                                                                                                     >  2:757186/1‑140 (MQ=255)
                                       tcatAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGatat                                                                                                     >  1:538888/1‑140 (MQ=255)
                                             tCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGAtt                                                                                                                   >  2:433802/1‑120 (MQ=255)
                                               tGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAAtt                                                                                             >  1:1945027/1‑140 (MQ=255)
                                                 cTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTc                                                                                           >  1:1957581/1‑140 (MQ=255)
                                                    tGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCGTTTCTGACTTCTTTTTCTGTTGAGTAGATTGTTTTCAAGGATATGCAAAATTTCCTg                                                                                        >  1:2104591/1‑140 (MQ=255)
                                                     ggATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGa                                                                                       <  2:2001106/140‑1 (MQ=255)
                                                     ggATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGa                                                                                       <  2:537090/140‑1 (MQ=255)
                                                     ggATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGa                                                                                       <  2:571888/140‑1 (MQ=255)
                                                     ggATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGa                                                                                       <  2:1152923/140‑1 (MQ=255)
                                                           tttttCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTcc                                                                                 >  2:1272719/1‑140 (MQ=255)
                                                           tttttCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTcc                                                                                 >  1:1435417/1‑140 (MQ=255)
                                                               tCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAAt                                                                             <  2:2203917/140‑1 (MQ=255)
                                                                  tCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGa                                                                          <  1:837466/140‑1 (MQ=255)
                                                                        aataaaCTGAGTTATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAg                                                                    <  2:2205775/140‑1 (MQ=255)
                                                                        aataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAg                                                                    <  1:612772/140‑1 (MQ=255)
                                                                        aataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAg                                                                    <  1:1376073/140‑1 (MQ=255)
                                                                        aataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAg                                                                    <  1:512487/140‑1 (MQ=255)
                                                                        aataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCATTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAg                                                                    <  2:1861667/140‑1 (MQ=255)
                                                                         ataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGa                                                                   <  2:467241/140‑1 (MQ=255)
                                                                         ataaaCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGa                                                                   <  2:1435417/140‑1 (MQ=255)
                                                                             aCTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCAATGCTAGATGTc                                                               >  2:2512985/1‑140 (MQ=255)
                                                                               tGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCtt                                                             <  2:1945027/140‑1 (MQ=255)
                                                                                 aGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTaa                                                           >  2:2063404/1‑140 (MQ=255)
                                                                                 aGTGATTTCTTTTGAGTGAGCGATCTAATTCCTTATCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTaa                                                           <  2:2528113/140‑1 (MQ=255)
                                                                                  gTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAg                                                          <  2:1870477/140‑1 (MQ=255)
                                                                                   tGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGt                                                         >  2:2645277/1‑140 (MQ=255)
                                                                                      tttCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCAt                                                      <  2:3045124/140‑1 (MQ=255)
                                                                                       ttCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCAtt                                                     <  1:2683821/140‑1 (MQ=255)
                                                                                        tCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTg                                                    >  1:432865/1‑140 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTTCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:757186/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:505886/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:102566/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:2461435/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:2868911/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:1251283/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:2914414/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:2754205/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:1559913/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:2043124/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:497299/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  1:484970/140‑1 (MQ=255)
                                                                                           tttgtttgAGCGATCTAATTCCTTCTCAAATTTTATAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:2858173/140‑1 (MQ=255)
                                                                                           cgtgattgAGCGCTCTAATTCCTTCTCAAAGTTTCTAATATGCTTTTCTGACTACTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTgaga                                                 <  2:1721806/135‑1 (MQ=255)
                                                                                            ttgtttgAGCGCTCTAAGTCCTTCTCAACTTTTCTAATCTGCTTTTCTGACTTCTTTTTCTGTTGATTAGATGGTGTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGaa                                                <  1:1877567/140‑1 (MQ=255)
                                                                                             tgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTGTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  2:2185889/140‑1 (MQ=255)
                                                                                             tgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  1:2391723/140‑1 (MQ=255)
                                                                                             tgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  1:2189420/140‑1 (MQ=255)
                                                                                             tgtttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  1:2969526/140‑1 (MQ=255)
                                                                                             tgtttgAGCGATCTAATTCCGTCTCAAAGTTTCTAATATGCTTTTCTGACTTCTTTGTCTGTTGATTAGATTGTGTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  1:2754694/140‑1 (MQ=255)
                                                                                               tttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               >  1:1293165/1‑138 (MQ=255)
                                                                                               tttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGa                                             >  1:578363/1‑140 (MQ=255)
                                                                                               tttgAGCGATCTAAGTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAAt                                               <  2:1293165/138‑1 (MQ=255)
                                                                                                ttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGAc                                            <  1:2272240/140‑1 (MQ=255)
                                                                                                ttgAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGAc                                            <  2:1613805/140‑1 (MQ=255)
                                                                                                   aGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATc                                                                            <  1:446565/105‑1 (MQ=255)
                                                                                                    gCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGt                                        >  2:1656042/1‑140 (MQ=255)
                                                                                                       aTCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGt                                     >  2:2216784/1‑140 (MQ=255)
                                                                                                       aTCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGt                                     >  2:1424283/1‑140 (MQ=255)
                                                                                                         cTAATTCCTTCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGa                                   >  2:3021512/1‑140 (MQ=255)
                                                                                                                 ttCTCAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCt                           <  1:2401104/140‑1 (MQ=255)
                                                                                                                 ttCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCt                           <  1:2216784/140‑1 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATATGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  2:2550408/1‑140 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  2:283736/1‑140 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  2:2114051/1‑140 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  1:1413571/1‑140 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  1:1024511/1‑140 (MQ=255)
                                                                                                                  tctcAAATTTTCTAATAGGCTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTg                          >  1:987793/1‑140 (MQ=255)
                                                                                                                             cTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAatat               <  1:1611412/140‑1 (MQ=255)
                                                                                                                                  atGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATtaata          <  1:1424283/140‑1 (MQ=255)
                                                                                                                                  atGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATtaata          >  2:1165222/1‑140 (MQ=255)
                                                                                                                                     cTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTaataaat       <  1:3021512/140‑1 (MQ=255)
                                                                                                                                     cTTTTTTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTaataaat       <  1:603233/140‑1 (MQ=255)
                                                                                                                                     cTTTTCTGACTCCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTaataaat       <  2:2593279/140‑1 (MQ=255)
                                                                                                                                      ttttCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTaataaata      <  2:1555472/140‑1 (MQ=255)
                                                                                                                                        ttCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAag    <  1:3049670/140‑1 (MQ=255)
                                                                                                                                          cTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAagag  <  1:1657849/140‑1 (MQ=255)
                                                                                                                                          cTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAagag  <  1:1112703/140‑1 (MQ=255)
                                                                                                                                          cTGACTTCTTTTTCTGTGTATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAacag  <  1:152684/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
GATAATGTCCGTCTGGTCATTGATATCGCTGAAACTCCATCATAATCTGCTTTGGATATTTTTTCGTCAATAAATAAACTGAGTGATTTCTTTTGTTTGAGCGATCTAATTCCTTCTCAAATTTTCTAATATGCTTTTCTGACTTCTTTTTCTGTTGATTAGATTGTTTTCAAGGATATGCAAAATTTCCTGATTGTCCAAATCGATGCTAGATGTCTTAAGTCATTGAGAATGACTTGTAGTGATCACAGCTGATTTCTAATATTAATAAATAAGAG  >  NZ_CP034943/718161‑718438

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑