New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 3592725 =250 (0.800)4 (0.010) 4/232 NT 1.7% coding (424/702 nt) urtE urea ABC transporter ATP‑binding subunit UrtE
?NZ_CP034943 = 3592721 241 (0.840)coding (428/702 nt) urtE urea ABC transporter ATP‑binding subunit UrtE
Rejected: Frequency below/above cutoff threshold.

Only 100 of 302 total aligned reads displayed.

GAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAGG  >  NZ_CP034943/3592589‑3592861
                                                                                                                                        |                                                                                                                                        
acggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctg                                                                                                                                       <  1:2585688‑M1/4‑1 (MQ=255)
acggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctg                                                                                                                                       <  2:2311998‑M1/4‑1 (MQ=255)
acggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctg                                                                                                                                       <  1:5004320‑M1/4‑1 (MQ=255)
 cggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctgc                                                                                                                                      >  1:2221410‑M1/136‑140 (MQ=255)
  ggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctgct                                                                                                                                     <  2:5036393‑M1/6‑1 (MQ=255)
  ggaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctgct                                                                                                                                     <  1:236332‑M1/6‑1 (MQ=255)
   gaaatgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctagctgctg                                                                                                                                    >  1:6691‑M1/134‑140 (MQ=255)
      atgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctaGctgctgctg                                                                                                                                 >  1:4116569‑M1/131‑140 (MQ=255)
      atgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctaGctgctgctg                                                                                                                                 >  1:4565851‑M1/131‑140 (MQ=255)
      atgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctaGctgctgctg                                                                                                                                 >  1:1580444‑M1/131‑140 (MQ=255)
      atgtctctttttctggaaatttctacgataacttgtctgattagttcgataattgacggctgaattccttccattggttcatcaagtaaaataattttcggatttcccatcagcgctctggcaattgctaGctgctgctg                                                                                                                                 >  1:115859‑M1/131‑140 (MQ=255)
         ctTTTTCTGGAAATTTCTACGATAACGTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGcc                                                                                                                              <  2:4250386/140‑1 (MQ=255)
          tttttCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCt                                                                                                                             <  1:4960157/140‑1 (MQ=255)
               cTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGTCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAACTAATATTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGATGCTGCTGCTGGCCTCCGCt                                                                                                                        >  2:2963904/1‑140 (MQ=255)
                tGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCACTTGCTAGCTGCTGCTGCTGGCCTCCGCtt                                                                                                                       >  2:2211006/1‑140 (MQ=255)
                tGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCtt                                                                                                                       >  2:4097946/1‑140 (MQ=255)
                tGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCtt                                                                                                                       >  1:4330466/1‑140 (MQ=255)
                gggAAATTTCTACGAGAACTTGTCTGATTAGGTCGATAATGGACGGCTGAATTCCTTCCATTGGTTCAGCAAGTAAACTACGTTTCGGATTTCCCATCAGCGCACGGGCAAGTGCTAGCTGCTGCTGCTGGCCGCCGCtt                                                                                                                       <  2:3926803/139‑1 (MQ=255)
                       ttCTACGTTAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTGTCGGATTTCCCATCAGCGCTCTGGCAATGGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATcgc                                                                                                                <  2:4052430/140‑1 (MQ=255)
                              aTAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCttt                                                                                                         <  2:4382567/140‑1 (MQ=255)
                               tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  1:3954929/140‑1 (MQ=255)
                               tAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  1:2010200/140‑1 (MQ=255)
                               tAACGTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  1:1725399/140‑1 (MQ=255)
                                     gTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGGTTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCa                                                                                                  <  2:2135194/140‑1 (MQ=255)
                                        tGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGc                                                                                               >  2:688903/1‑140 (MQ=255)
                                          aTTAGTTCGATAATTGACGGCTGATTTCCTTCCAGTGGTTCATGAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCTCCTTTGCGGTCAAGCAt                                                                                             <  2:858507/140‑1 (MQ=255)
                                          aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  2:25431/140‑1 (MQ=255)
                                          aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  2:1034849/140‑1 (MQ=255)
                                          aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             >  1:3681542/1‑140 (MQ=255)
                                          aTTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAt                                                                                             <  1:1305099/140‑1 (MQ=255)
                                           ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  1:4235787/140‑1 (MQ=255)
                                           ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  1:2112969/140‑1 (MQ=255)
                                           ttAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  1:192279/140‑1 (MQ=255)
                                             aGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtctc                                                                                          >  2:4832460/1‑140 (MQ=255)
                                               ttCGATAATTGACGGCTGACTTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                        >  1:2887603/1‑140 (MQ=255)
                                               ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGTATTTCCCATCATCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                        >  1:4927394/1‑140 (MQ=255)
                                               ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCGGCCTTTGCGGTCAAGCATCTAtt                                                                                        >  2:3534646/1‑140 (MQ=255)
                                               ttCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCtt                                                                                        >  1:85000/1‑140 (MQ=255)
                                                tCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCttt                                                                                       <  2:62831/140‑1 (MQ=255)
                                                   aTAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaa                                                                                    <  2:1796099/140‑1 (MQ=255)
                                                     aaTTGACGGCTGAATTCCGTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAg                                                                                  <  2:1520527/140‑1 (MQ=255)
                                                         gACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCAtc                                                                                            <  2:4573100/126‑1 (MQ=255)
                                                         gACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAgg                                                                              >  2:1138231/1‑140 (MQ=255)
                                                          aCGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                             <  2:2699054/140‑1 (MQ=255)
                                                          aCGGCTGAATTCCTTCCAGTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGa                                                                             <  2:3083161/140‑1 (MQ=255)
                                                                   ttccttcgATTGGTTCATCAAGTAATATAATGTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGa                                                                    <  2:2863363/140‑1 (MQ=255)
                                                                        tccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAAt                                                               >  2:1642831/1‑140 (MQ=255)
                                                                        tccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAAt                                                               >  1:698060/1‑140 (MQ=255)
                                                                         ccATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATg                                                              <  2:2051687/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:5069348/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:1302181/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:2514279/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:1250978/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:4656052/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:586454/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  1:1876716/140‑1 (MQ=255)
                                                                          cATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGACTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGt                                                             <  2:2434754/140‑1 (MQ=255)
                                                                           aTTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCGTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTc                                                            >  1:4497729/1‑140 (MQ=255)
                                                                               gTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTcc                                                        <  1:1091021/140‑1 (MQ=255)
                                                                                ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAATCAGGAAACCACTGAAAAATGTCTTCCt                                                       >  2:3629548/1‑140 (MQ=255)
                                                                                ttCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCt                                                       >  2:495411/1‑140 (MQ=255)
                                                                                  catcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTCGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTGTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAACAATGTCTTCCTTg                                                     >  2:1372703/1‑140 (MQ=255)
                                                                                  catcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTg                                                     >  1:2962517/1‑140 (MQ=255)
                                                                                  catcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTg                                                     >  1:3283060/1‑140 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCTGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGATTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAACCCACTGAAAAATGTCTTCCTTGAc                                                   <  1:4684385/140‑1 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGGTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  2:4688576/140‑1 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:3824231/140‑1 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   >  1:1412005/1‑140 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  2:3237189/140‑1 (MQ=255)
                                                                                    tcaAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGATGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCACGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   >  1:1209689/1‑140 (MQ=255)
                                                                                         tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                              <  1:645128/140‑1 (MQ=255)
                                                                                         tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                              <  2:1396934/140‑1 (MQ=255)
                                                                                         tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                              <  1:4589058/140‑1 (MQ=255)
                                                                                         tAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTccc                                              <  1:2311966/140‑1 (MQ=255)
                                                                                            aataatTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTTCTTCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCa                                           <  2:4160148/140‑1 (MQ=255)
                                                                                            aataatTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCAGTGAAAAATGTCTTCCTTGACCTCCCCCa                                           <  2:2636882/140‑1 (MQ=255)
                                                                                                   ttCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCGCCCATtctctc                                    >  1:4181716/1‑140 (MQ=255)
                                                                                                    tCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTcc                                   <  1:3440231/140‑1 (MQ=255)
                                                                                                    tCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTcc                                   <  2:3869353/140‑1 (MQ=255)
                                                                                                             ccATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCAGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACATCCCCCATTCTCTCCTTCTTCGGa                          <  2:1985934/140‑1 (MQ=255)
                                                                                                                    ctctctGGCAATTGCTAGCTGCTGCTTCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCACATTCTCTCCTTCTTCGTAAGCGGct                   >  2:1070029/3‑140 (MQ=255)
                                                                                                                    cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTcc                                   <  1:1498996/124‑1 (MQ=255)
                                                                                                                    cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct                   <  2:2454984/140‑1 (MQ=255)
                                                                                                                    cgcTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGct                   <  2:500110/140‑1 (MQ=255)
                                                                                                                    cgcTCTGGCAATTGCTACCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCAGTCTCTCCTTCTTCGGAAGCGGct                   >  2:3511442/1‑140 (MQ=255)
                                                                                                                    cgcTCTGGCAATTGCGAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTGGACCTCCCCCCTTCTCTCCTTCTTCGGAAGCGGct                   <  2:374852/140‑1 (MQ=255)
                                                                                                                      ctctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTaa                                                                                    >  1:963914/1‑73 (MQ=255)
                                                                                                                       tctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt                <  2:4321519/140‑1 (MQ=255)
                                                                                                                       tctGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtctt                <  2:805129/140‑1 (MQ=255)
                                                                                                                         tGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGAc                                                   <  1:1017146/103‑1 (MQ=255)
                                                                                                                         tGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCtcttct              >  1:4771253/1‑140 (MQ=255)
                                                                                                                          ggCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTtctc             <  1:3236018/140‑1 (MQ=255)
                                                                                                                          ggCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCGCCTTCTTCGGAAGCGGCTCTtctc             <  1:361692/140‑1 (MQ=255)
                                                                                                                              aTTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAag         >  1:5174584/1‑140 (MQ=255)
                                                                                                                                tGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagca       >  1:811634/1‑140 (MQ=255)
                                                                                                                                tGCTAGCTCCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCACTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCACCACCATTCTCTCCTTCTGCGGAAGCGCCTCTTCTCCAagca       >  2:3483394/1‑140 (MQ=255)
                                                                                                                                 gCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAagcag      >  2:3424675/1‑140 (MQ=255)
                                                                                                                                     gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTg                                                                                                        <  2:2303872/38‑1 (MQ=255)
                                                                                                                                     gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAgg  <  2:3146516/140‑1 (MQ=255)
                                                                                                                                     gctgctgctgctGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAgg  >  2:401379/1‑140 (MQ=255)
                                                                                                                                        |                                                                                                                                        
GAAATGTCTCTTTTTCTGGAAATTTCTACGATAACTTGTCTGATTAGTTCGATAATTGACGGCTGAATTCCTTCCATTGGTTCATCAAGTAAAATAATTTTCGGATTTCCCATCAGCGCTCTGGCAATTGCTAGCTGCTGCTGCTGGCCTCCGCTTAAATCGCCGCCTTTGCGGTCAAGCATCTCTTTTAAAGCAGGAAACCACTGAAAAATGTCTTCCTTGACCTCCCCCATTCTCTCCTTCTTCGGAAGCGGCTCTTCTCCAAGCAGCAGG  >  NZ_CP034943/3592589‑3592861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.