| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 135,162 | C→A | 6.7% | intergenic (+209/‑29) | EO946_RS00715 → / → rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 135,162 | 0 | C | A | 6.7% | 1056.8 / 18.4 | 426 | intergenic (+209/‑29) | EO946_RS00715/rpsJ | alpha/beta hydrolase/30S ribosomal protein S10 |
| Reads supporting (aligned to +/- strand): ref base C (185/195); new base A (42/2); total (227/199) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.31e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 442 total aligned reads displayed.
AAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCT > NZ_CP034943/135023‑135301 | tCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCAGGGCAAATGTGTTGAGGTTTTTATCACGGGGTACTGTGTAAAttt > 1:1311912/1‑139 (MQ=255) tCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTg > 2:4052748/1‑140 (MQ=255) gcagcaTACGTCTATTTTCTGTATAATGGTGTATGTTGGGCTTTTCCTTCGATGAAGTGAGAGGTTGCTGACACTCCCGGCCGCTTTGCCTTGGCAAACGTGGTCATGTATTTCACACTCAGAAATGTCTAACATgctct > 1:4056592/1‑136 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCATGGCAAAGGTGTTCAGGTTTTTGTGACGGAGAACTGTCTAACTtgttgt > 1:4527244/1‑140 (MQ=255) gCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGAGGt > 2:234226/1‑140 (MQ=255) aTACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTAAGGTTTTTGTGACGGAGAACTGTGTAACTTGATGTATGCg > 1:4872122/1‑140 (MQ=255) tACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCACAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGa > 2:2943984/1‑140 (MQ=255) cGTGTATTTTCTGTATAATGGTGTATGTTGGTCTTGGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGaaa < 2:849407/140‑1 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCCTGGCCAAGGTGTTGAGGTTTTTATAACGGAGAACTGTCTAACTTTATGTAGGGGAAAAGGAGGGaaaa > 1:3368497/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATTGCAAACGTGTTAAGTTTTTTATAAAGGAGAAAAGTATAAATTGATGTAGGGGAAAAGGAGGGaaaa > 1:1932006/1‑140 (MQ=255) tGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCGTTTCCCTGGCCAACGGGTTAATGTTTTTATAAAGGAGAACAGAGTAACTTGTTTTATGCGAACAGGAGGGaaaa > 1:2040954/1‑140 (MQ=255) gTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGTTTTTTGCGCAAAGGTGGGTAaat > 2:386720/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCAAGGCACAGGTGTTAAGGTTTTTATCACGGAGAACTGTCTAAATTGTTGTAGGCGAAAAGGAGGGGAaata > 1:1413363/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCCTGGGAAAGGTTTTCAGGTTTTTATCACGGAGAACTGTCTAACTTGATGTGTGCGAAAAGGAGGGAAaata > 1:2869269/1‑140 (MQ=255) tataATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAAGGCAAAAGTGTTCACGTTTTTATCAAGGAGAAAAGAGTAACTTTATTTAAGCGAAAAAGAGGGaaaaaa > 1:2339140/1‑138 (MQ=255) taATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACAGTCTAACATTATGTAGGCGAAAAGGAGGGAaaaaaaa > 1:1491265/1‑139 (MQ=255) tGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGc < 1:220124/140‑1 (MQ=255) tgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAAATTGATTTAGGCGAAAAGGAGGGAAAATAATGGcaaa > 2:5130956/1‑140 (MQ=255) tgtATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTATCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGcaaa > 2:167500/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATTGCAAAGGTGTTCAGGTTTTTATAACGGAGAACTGTCTAACTTGATTTAGTCGAAAAGGAGGGAAAATAAATGcaaaac > 1:2647031/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGGACAGGGGGTCAGGTTTTTCTCACGGAGAACTGTGGACCTTGATGTTGGCGAAAAGGAGGGAAAATAATGGcaaaac > 1:2765452/1‑140 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCAAGGCAAAGGTGTTCAGGTTTTTCTAACGGAGAACTGTGGAACTTGATTTAGGCGAAAACGAGGGAAAATAAAGGcaaaaa > 1:3773755/1‑139 (MQ=255) tATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCGTTGCCAGGGCACAGGTGTTGAGGTTTTTGTCACGGAGAACTGTATAACATGATGTTGGGGCAAAGGACGGGAAAAAATGGcaaaac > 1:1613507/1‑140 (MQ=255) gTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGTTGTTCAGGTTTTTCTCACGGAGAACTGTCTAAATTGATGTAGGCGAAAAGGAGGGAAAAAAATGGcaaaacaaa > 2:191922/1‑140 (MQ=255) tGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGt > 2:2147362/1‑104 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTGCATTGCAAAGGTGTTAAGGGTTTTATCACGGAGAACTGTCTAACATTATTTAGGCGGAAAGGATGGAAAATAAAGGCAAAACaaaaaaa > 1:3456172/1‑139 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTTCCATTGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAat > 2:1065820/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGGCAAGGCAAAGGTGTTCAGGTTTTTTTAAAGGAAAAAAGTGGAAAATTATGTAGGGGAAAATGAGGGAAAATAAATGCAAAAAAAAAAat > 1:3990814/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAat > 2:4774019/1‑140 (MQ=255) gTCTTTGACTGCGATGAAGGGAGAGGTTGCTGCCACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCCGGTTTTTCTCACGGAGCACGGGCGAACATGATGTAGGCGCACAGGAGGGAAAATCATGGCAACCCaaaaaag > 2:1377857/1‑139 (MQ=255) tCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAatt < 1:2819171/140‑1 (MQ=255) tttGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTTATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAattag > 2:924543/1‑138 (MQ=255) tGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACCGAGAACTGTCTAACATGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAAAAAAAAattcgaa > 2:3218470/1‑138 (MQ=255) gATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCCGGTTTTTCTCACGGAGAACTTTATAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGttt > 2:448547/1‑140 (MQ=255) tGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGa < 2:2875814/140‑1 (MQ=255) tGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCCAAGGTGTTCAGGTTTTTGTAAAGGAGAACAGTCGAAATTGATGTAGGCGAAAAGGAGGGAAAATAAATGCAAAACAAAAAAATAGTATTAGTTTTAAAGCa > 1:3713526/1‑140 (MQ=255) agagGTTGCTGACACACCCTGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 2:2184506/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 2:175141/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCata < 2:1834034/140‑1 (MQ=255) agagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGATTGAAAGCata < 2:4149251/140‑1 (MQ=255) gcggTTGCTGACACCCCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTATCTCACTGAGAACTGTCAAACTTTATGTAGGCGAAAATGACTGCAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCatat < 1:2153190/138‑1 (MQ=255) gagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCatat < 2:2040954/140‑1 (MQ=255) gagGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCatat < 2:275557/140‑1 (MQ=255) cagcgtgctgcCACACCCGCCCGCTTTGCCAGGGCAAAGGTGTTCACGGTTTTCTCACGGCGAACTGTCTAACTGGAGGTAGGCGACAAGGCGGGAAACTAATGCCAAAACAAAACATTCGGATTCGTTTGAAAGCatat < 1:4449125/135‑1 (MQ=255) agGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTAAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATg > 2:664213/1‑140 (MQ=255) ttGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATc > 2:246254/1‑140 (MQ=255) cTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCCGGTTTTTCTCACGGAGAACTGTCTAAGTTGATGTAGGCGAAAAGGAGGTAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATa < 2:2244872/140‑1 (MQ=255) cTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATa < 1:5151041/140‑1 (MQ=255) tGACACACCCGGCCGCTTTGCTATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAg < 2:4938556/140‑1 (MQ=255) tGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAg < 1:1031118/140‑1 (MQ=255) tGACACACCCGGCCGCTGTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAg < 1:1533653/140‑1 (MQ=255) gCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATc < 2:605549/140‑1 (MQ=255) gCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCa < 1:2518289/140‑1 (MQ=255) aTGGCAAAGGTGTTCAGGATTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCagag < 1:3575879/140‑1 (MQ=255) ggTGTTAAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGAttgt > 2:42853/1‑140 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGTGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGACGATTGTTGaa > 1:3059332/1‑140 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaa > 2:1133826/1‑140 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaa > 1:660097/1‑140 (MQ=255) ttCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGGAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATATGAAGAGAATATTGTTGaa > 1:461292/1‑140 (MQ=255) ttCAGGTTTATCTCACGGAGAACTGTCTAACTTGATGTAGGCGAACAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaa > 1:2382841/1‑140 (MQ=255) tCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGaaa > 1:933303/1‑140 (MQ=255) cAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAAc > 1:2725081/1‑140 (MQ=255) tttCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGTAACGGCaaa > 2:4603172/1‑140 (MQ=255) tttCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCaaa < 2:3456172/140‑1 (MQ=255) actgagaACTGTATAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATGAGTAGTCGTTTGAAAGCATATGATCATAGAATCCTTGATCTATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:3503257/137‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:2786929/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:338237/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:3713526/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:1085327/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:1458642/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 2:1194634/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:3230409/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:1761061/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:4121454/140‑1 (MQ=255) aCGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:4774019/140‑1 (MQ=255) aCGGAGAACTGTCTAACTAGATGTAGGCGAAAAGGATGGAACAAAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTc < 1:1725966/140‑1 (MQ=255) cGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCt > 1:120662/1‑140 (MQ=255) gaACTTTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:767864/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:3927682/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:5027500/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 1:4634238/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 1:5002767/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 1:709193/140‑1 (MQ=255) gaACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGCCAAAACTAAAAATTCGTATTCGATTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 2:3607279/140‑1 (MQ=255) aaCTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGc < 1:4910059/140‑1 (MQ=255) aaCTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGc > 1:4312957/1‑140 (MQ=255) tGTCTAACTTGATGTAGGCGAACAGGAGGGAAAATAATGGCAAAACAAAAATTTCTTCTTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 2:3773755/140‑1 (MQ=255) tGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 2:3980902/140‑1 (MQ=255) tGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 1:388314/140‑1 (MQ=255) tGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 1:837712/140‑1 (MQ=255) tGTCTAACTGGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAg < 2:3010693/140‑1 (MQ=255) ggTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAACACTTCTTATGCGTTTGAAAGCATATGATCATAGCATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGGGCTAg < 1:3009653/139‑1 (MQ=255) tCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAgtg > 2:3321006/1‑140 (MQ=255) aCTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATc < 2:1545008/140‑1 (MQ=255) aCTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATc < 2:725539/140‑1 (MQ=255) aCTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATc < 2:2647031/140‑1 (MQ=255) aCTTGATGTAGGAGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATc < 2:4030967/140‑1 (MQ=255) cTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTg < 1:3622638/129‑1 (MQ=255) cTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTATTGTATcg > 1:4541931/1‑139 (MQ=255) cTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCt > 1:4252340/1‑140 (MQ=255) | AAGTCTTGCAACATACGTCTATTTTCTGTATAATGGTGTATGTTGGTCTTTGACTGCGATGAAGTGAGAGGTTGCTGACACACCCGGCCGCTTTGCCATGGCAAAGGTGTTCAGGTTTTTCTCACGGAGAACTGTCTAACTTGATGTAGGCGAAAAGGAGGGAAAATAATGGCAAAACAAAAAATTCGTATTCGTTTGAAAGCATATGATCATAGAATCCTTGATCAATCTGCAGAGAAGATTGTTGAAACGGCAAAACGTTCTGGTGCTAGTGTATCT > NZ_CP034943/135023‑135301 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |