| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,052 | T→G | 17.0% | E573D (GAA→GAC) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,052 | 0 | T | G | 17.0% | 407.1 / 25.5 | 206 | E573D (GAA→GAC) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (59/103); new base G (41/3); total (100/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.27e-12 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 212 total aligned reads displayed.
GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCG > NZ_CP034943/633914‑634182 | gTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGtt < 2:4673596/140‑1 (MQ=255)gTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGtt < 2:3597441/140‑1 (MQ=255) tCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttc > 2:3891867/1‑140 (MQ=255) cATGGATGGCTTGTACCTTTACATGGTCTTGATAGATTTCCCGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttctttc < 2:3842907/140‑1 (MQ=255) cATGGATGGCTTGTACC‑TTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttgtttct > 2:4602806/1‑140 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc > 2:4642348/1‑140 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc < 1:3321701/140‑1 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTc < 1:3891867/140‑1 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCtttttg > 2:3499799/1‑139 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTGGTTTGtttttgcg > 1:4556240/1‑137 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCa > 1:2469012/1‑140 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 2:4808881/140‑1 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTGTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 1:1011270/140‑1 (MQ=255) cTTGTACCATTTCATGGTCTTGATAGATTTCCGGAGCACAGAGCAATTCACCGTTATGACTACTGTATTCTTCAATGGTTTGAACAGTGGCTTCAATGTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 1:3591807/140‑1 (MQ=255) tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCattatt > 2:4043707/1‑140 (MQ=255) tACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTACAATCtt > 2:4755615/1‑140 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTACATTCtttttat > 1:1226806/1‑138 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTGTTACATAGTTTttctt > 2:1305967/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTGCATTCTTTttgtt > 1:2524651/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTGCATTCTTTttctt > 1:2550077/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTATTTATTTTTCCATTCTTTttctt > 2:1562344/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTACATTATTTttatt > 1:3946283/1‑140 (MQ=255) tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTCATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGAGTTATTTGTTTTTACATTCTTTttgttc > 2:4905315/1‑140 (MQ=255) tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATGCGACGGAGTCGTTGGGGGTCTTTGTTTTTCGATTCTTTttgttg > 2:4246757/1‑139 (MQ=255) tCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTACATTCTTTttattc > 2:5128404/1‑140 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTACATTCTTTTTATTATTCata > 2:1327967/1‑140 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCTTTTTCCATTCTTTTTATTCTTCata > 2:3862942/1‑140 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 2:1122609/140‑1 (MQ=255) tGATAGATTTCCGTATCACATAGCACTTCATCGTTATGACTAATGTTTTCTTCAATGGTTTTAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGa < 2:4398053/140‑1 (MQ=255) tGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGa < 1:4043707/140‑1 (MQ=255) gATAGATTTCCGGATCACATAGCTATTCATGGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa < 2:196307/140‑1 (MQ=255) gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt < 1:845984/140‑1 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTGCGTTATTTTTCCGGTATTTTTGGTATTCATATTAACGgttt > 2:862412/1‑140 (MQ=255) tttCCGGATCACAAAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACACTGGCTTCAATTTCTTCAATCCCACTGAGTCGTTGGCGTTATATATTTTTAAATTCTTTTTGTTGTTCAAATTGACCtttt > 2:632800/1‑140 (MQ=255) ccGGATCACATAGCAATTCCTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAg < 1:1729915/140‑1 (MQ=255) cGGCTCACATAGCAATTCAGCGTTATGACTAATGTTTTCTTCACTGGATTGAACCGTGGCTTCAATTTCGTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:3198331/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:246541/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:1441964/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:5022799/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:2389870/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:1237277/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCACTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:2070202/140‑1 (MQ=255) agtaTCACAGATCAAGTGATAGTGATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGTCTGAGTCGTTGGCGGTCTGTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:4395355/137‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTGAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATGCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc < 2:1007976/140‑1 (MQ=255) cacaTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGc < 2:4794640/140‑1 (MQ=255) aGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAc < 1:3124091/140‑1 (MQ=255) aaTTCATCGTTATGACGAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCACTCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGa < 2:2748968/140‑1 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCATTCTTTTTCTTCTTCATATGAAAGTTTTTTTTAAGGGTTTACCGaaa > 2:3151677/1‑139 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCATTCTTTTTATTCTTCATATTTACGTTTTGAGTGAGGCTTAAACGaac > 2:1497695/1‑139 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTGTTTTTCCATTATTTTTGTTCTTCATATTAACGTTTTTAGTCAGGCTTAAaagaag > 2:3815959/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGGGGTTGTTTTTGCGGTGTTTTTGTTTGTGATATGAACGTTTTTTGTGCGGCTTTACCGAAg > 1:2317073/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCAGACGGAGTCGTTTGCGTTGTTTGTTTTTGCATTATGTTTCTTCTTGATAAGAAAATTTTTAGTGTGGCATAAACGAAg > 1:3707064/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCATTGTTTTTGTTTTTGGTATTAACGTTTTGATTGAGGGTTTAAAGAAGCa > 1:1396362/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTATTTTTGGATTCTTTTTGTTGGTCATTTTAAGGGTTTGTGTGATGGGTAACAGAAGCa > 1:2876306/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCATTCTTTTTATTCTTCATATGAAAGTTTTGAGTAAGGCTTAAACGAAGCa > 2:91343/1‑140 (MQ=255) cATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGGTTTTGCAGTGTTTTTGTTGTTGATATTTACGTTTTGTGTGAGGCTTAACCGAAGcc > 1:4460076/1‑139 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTGTTTTTCCCTTGTTTTTGTTGTTCATTTGAACGTGTTGTGTCAGGCTTAACCGAAGCAg > 2:3407771/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAATCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAg > 2:1092560/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCGTTGTTTTTTTTCTTAAAATGTAGGTTTTTTGTCAGGCTTAAACGAAGCAg > 1:4635048/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCGTTGTTTTTGCCGTCTTTTTGTTATTGATATGAACGTGTTTGGTCCGGCTTTAACGAACCCGGc > 2:1752399/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCGTTATTTTTTCATTCTTTTTCTTCTTCATATTAACGTTTTGTGTCAGGCTTAAACGCAGCCGGc > 2:3233344/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTAAGGCTTAACCGaacccagg > 2:5185977/1‑134 (MQ=255) tATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTGCCATCTTTTTATTCTTCATATTAACGTTTTTAGTAATGCGTAAACGAAACAGGCGtt > 2:2963195/1‑140 (MQ=255) aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTCCAATATTTTTATTCTTAATATGAACCTTTTTAGTAAAGCTTAAAACAAGAAGGCGtttttt > 2:2379682/1‑140 (MQ=255) aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCgg < 2:2840747/140‑1 (MQ=255) aaTGCTTTCTTCAAGGGTATGAACAGTGGCTTCAATGTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTGCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCgg < 1:4190080/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCTACGGAGTCGTTGTCTTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCTAAGCAGGCGTTTTTTCGGa < 2:2699822/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:4537789/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:1381758/140‑1 (MQ=255) aTGTTTTCTTCAATGGTTAGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATCTGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 1:4877110/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTACATTCTTTTTGTTATTCATATTAAAGTTTTTAGTAAGGCTTAAACGAAGAAGGCGTTTTTTGGGAt > 2:398846/1‑140 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt < 2:1649876/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGAt < 2:2274591/140‑1 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTGGTTTTCGATTCTTTTTGTTGTTCATATTAAAGTTTTGTTTGAGGCGTTACAGAACGAGTCGGTTTTTgggtgtcatc > 1:5128623/1‑133 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTCCCTTATTTTTATTATTCATATGAACCTTTTTTGTCAGGCTTAACCGAACCACGCGTTTTTTGGGATTGctc > 1:4741499/1‑140 (MQ=255) tcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGGTTGTTTTTGCATTATTTTTGTTATTGATATTAAAAGTTTTTTTGATGGTTAAACGAACAAGGGGTTTTTTTGGATTcatg > 1:2036785/1‑137 (MQ=255) ttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCCTTCTTTTTGTTCTTCATATTAAAGTTTTGTGTAAGGCTTAAACGAAACAGGCGTTTTTTGGGATTACTGtt > 2:3737514/1‑140 (MQ=255) tcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTg < 2:2089534/140‑1 (MQ=255) tGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGa < 1:1343002/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTCTTTTTCCCTTGTTTTTCTTCTTGATATGTACGTTTTGAGTGAGGCTTAAACGAATCAGGCGTTTTGTAGGATTCCTCTTGCTGATTCATTTtctgc > 2:4997283/1‑138 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTATTTTTGCATTGTTTTTGGTGTTCATTTTGACGTTTTTAGGAAGGCGTAAAAGAAGCAGGGGTTTTTTCTGGTTACGATTGGGGATTCATTTTCTcc > 2:1525723/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGGTTGTTTTTGCATTGTTTTTTTTAGTCATATGCACGTTTTTATTCAGGGTTAACCGGAGGAGGCGTTTTTTGGGTTTCCTCGTGGTGATTGATTTtgtca > 2:4452471/1‑139 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCCTTGTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTCGGATTCCTCGTGCTGGTTCAttttgtgc > 2:3785313/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGGTTGTTTTTGCATTAGTTTTGGTGTTGCTATGTACGTTTTGTGTGAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTGCTCTTGCTGGTTGATTTTGTcc > 1:3838912/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTCTTTGTTTTTTCAGTTTTTTTATTCTTGATATTAACGTTTTGGGTAACGCTTTAACGAACCATCCGTTTTTTAGGATTACTCTTGCTGTTTGATTTTGTcc > 1:3721433/1‑140 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGGTGGGGTTGTTTGTTTTTGCCTTCGTTTTGTTCTTCATATGAACGTTTTTGGTGAGGCTTATACGAAGCGGGGGTTTTTTTGGGTTGCTCTGGGTGTTTGGTTTTGTcc > 2:152031/1‑140 (MQ=255) ggCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTATTTTTGCATTCTTTTTCTTGTTAAAATTAACGTTTTGAGTCAGGCTTAAACCAAGCAGGCGGTTTTTCGGATTCCGCTTTCTGTTTAAGTTTCTCCa > 2:2603327/1‑140 (MQ=255) gCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTGTTTTTGCATTCTTTTTATTCTTCATAGTCACGGTTTGTGTGACGCTTAAACGAAGCAGGCGTTTTTTGGGATTGCTCTTTGTGATTCATTTTATCCaa > 2:1844078/1‑140 (MQ=255) aTTTCTTCAATCCGACGGAGTCGTGGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGACCGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg < 1:3958347/140‑1 (MQ=255) aTTTATTCAATCCGACGGAGTCTTTGGCTTTCTTTCTTTTTCCATTCTTTTTCTTATTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAg < 1:2959172/140‑1 (MQ=255) cttcAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCCGGCGTTTTTTAGGCTTCCTCTTGGTGGTTCAGGTTCTCCCATTCAAgcggc > 2:871240/1‑140 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:552057/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTCTTTTTCTTCTTCCTATGAACGTTTTGAGTCACGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGAGTCATTTTCTCCAATTCAAgctgct < 1:1530346/140‑1 (MQ=255) ttcAATCAGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:3331447/140‑1 (MQ=255) aCGGATTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTCTGAGTCAGGCTTAACCGAAGCAGGCGTATTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtttttt < 1:786757/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTGTCCATTCTTTTTCTTCTTCATATGAACGTTGTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 1:524607/140‑1 (MQ=255) ggAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtc < 1:558310/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:4745693/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 1:3405865/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 1:4905315/140‑1 (MQ=255) | GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCG > NZ_CP034943/633914‑634182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |