| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 755,531 | A→C | 8.2% | Q22H (CAA→CAC) ‡ | EO946_RS03880 → | rhamnogalacturonan acetylesterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 755,531 | 0 | A | C | 8.2% | 673.8 / 6.1 | 288 | Q22H (CAA→CAC) ‡ | EO946_RS03880 | rhamnogalacturonan acetylesterase |
| Reads supporting (aligned to +/- strand): ref base A (178/70); new base C (2/34); total (180/108) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.68e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCG > NZ_CP034943/755392‑755666 | cACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCaa < 1:3222707/140‑1 (MQ=255) tatgTTTTTTCAATTGAAGTTCTTTCATTGATTTATGTAATATGAAACTAAAAAAACGAGTGTGAATTAGAAATTGCAAATCACATTTATGTTACTGGCGATTCAACTTTTCAAACGTATGGAGACAGCACAAATCAAgg < 2:2986798/137‑1 (MQ=255) gagCTTTCCATGATTGATGCCATAAGAAACGAAAAAAACGCGGGGGAATGAGAAATCGCAAAACACATTTATCTTGCTGGCGATTCAACTGTACAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTtct < 1:4076567/140‑1 (MQ=255) tCCTTGATTGATGCCATATGAACCGAAAAAATCGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc < 2:2069503/140‑1 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:3313399/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:505777/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 2:2394191/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:776662/1‑140 (MQ=255) tCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTc > 1:2589686/1‑140 (MQ=255) aTGATTGATTCCATATTAAACGAAAAAATCTAGGGTGAATTAGAAATGTCAAATCACATTTATCTTGCTGGCGATTCAACTGTTAAAACGTATGTAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCa < 2:5050204/140‑1 (MQ=255) tgattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTAGGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCAt < 2:760562/140‑1 (MQ=255) gattgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATc > 1:1067971/1‑140 (MQ=255) ttgatGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTg > 1:2433993/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAAGGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4256335/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2854853/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:4848270/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:3368210/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:523477/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1976461/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:444498/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1811409/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:4147885/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 2:669479/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1677593/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:1360057/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:4178923/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATCGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCTCAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:997459/1‑140 (MQ=255) atGCCATATGAAACGAAAAAAACGAGGGCGACAGAGAAATGGCAAATCACATATATCTTGCTGGCGAGTCAACTTTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTCGGGGCAGTTTCTCGGCTCGCATCTGccc > 2:15720/1‑139 (MQ=255) aacacATATAAAAACAAAAAAACGAGGGGGAATTATAAATTTCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCg > 1:2142964/5‑140 (MQ=255) tccATATGAAACTAAAAAAACGAGGGGGAATGATAAATGGCAAATGAGATTTTTCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:339823/139‑1 (MQ=255) gctatatGAAACTCAAAAAACGATTTGGAATGAGAAATGGAATATCTCATTTATCTTGCTGGAGATTCACCTTTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:1169793/137‑1 (MQ=255) gcaatatGACACGAAACAAACGAGGGGGAATGAGAAATGGCAAATCCCATTTATCTTGCTGCCGATTCAACTGTTCAAACGTATGCAGCCAGCACACCTCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 2:2257313/137‑1 (MQ=255) gCCATATGAAACGAAAAAAACGCGGGGGAATGAGAAATGGCACAGCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGACACAGCACACCTCCCGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 1:4306872/140‑1 (MQ=255) gCCATATGAAACGAAAAAAACGAGGGGGAATGAGAACTCCCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGACACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGa < 1:3500992/140‑1 (MQ=255) gCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCACACGTATGTAGACAGCACAAATCAAGGGGGGTGGGGGCAGGTTCTCGGCTCGCATCTGCCGGa > 1:5182185/1‑140 (MQ=255) cATATGAAACTAAAAAATCGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCTATTCAACTGTTCAACCGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGc < 2:4349645/140‑1 (MQ=255) cATATGAAACGAAAAACACGAGTGTGAATGAGAAATGGCAAATCACATTTATCTGGCTGGCTATTCAACTGTTCAAACGTATGGAGACATCACAAATCAAGGGGGGTGGGGGCAGTGTCTCGGCTCGCATCTGCCGGAGc < 2:1343714/140‑1 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGATCat > 1:2718771/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 1:598313/1‑140 (MQ=255) tatGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCat > 2:4068285/1‑140 (MQ=255) atGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAgg > 2:1119776/1‑99 (MQ=255) taaaCGAAAAAAACGAGTGGTAATGAGAAATGTCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAA‑GGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:4536942/139‑1 (MQ=255) caccGACAAAAACGAGGGGGAATGAGAAATGCCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAACCGTATGGAGACAGCACCAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:2365336/137‑1 (MQ=255) aaaCTAAAAATAAGATGGGTAATGAGATATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:2687048/140‑1 (MQ=255) aaaCTAAAAAAACGAGGGTGAATGAGACATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCACGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1780102/140‑1 (MQ=255) aaaCGAAATAAACGTTGTGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTTTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:2765836/140‑1 (MQ=255) aaaCGAAATAAACGAGCGTCAATGAGAAATGCAAAATCACATTTATCTTGCTGGCGATTCACCTTTTCAAACGTATGGACACAGCACTTATGTGGGGGGGTGGGGCCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:1949214/140‑1 (MQ=255) aaaCGAAAAAAACGAGGTGGAATGAGAAATCTCAAATCACATTTATCTTGCTGGCGATTCAACTGATCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 2:311392/140‑1 (MQ=255) aaaCCAACAAAACGAGGTGGAAAGAGCAATGGCACATCACATTGATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGCCAGCACACCACCAGGGGGGGGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc < 1:810692/140‑1 (MQ=255) actaaaaaaaCGTGGGGGAATGATAAATGGCTAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGTGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:1610460/137‑1 (MQ=255) accaaacaaacGAGGCGGAATGCGAACTGCCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACCACTCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:96339/137‑1 (MQ=255) accaaaaaaaCGCGGGGGAACGCGCACTGCCAAATCACCTTTATCTTGCTGGCTCTTCAACTGTTCACACGTATGGAGACAGCACAAATCCCGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCaa < 2:1708201/137‑1 (MQ=255) cGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAg > 2:370571/1‑140 (MQ=255) gAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGt > 1:649595/1‑140 (MQ=255) gggggAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTC‑‑‑TGATTAACAGAGCaa > 1:1017322/1‑140 (MQ=255) aaaTGGCAAATCACATTTATCTTGATGGCGATTCAACTGTTCAAAAGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCTGCTCGCATCTGCAGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGga > 1:4931734/1‑140 (MQ=255) tGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaaga > 1:3696368/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 2:4958025/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 2:4624942/1‑140 (MQ=255) ggCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGgaagaa > 2:4492836/1‑140 (MQ=255) gtcttttATGTTGATGGCGATTCATCTGTTCAATGGTCTGGAGACAGCATTTTTCACGGGGTGTGGGGGCAGTTTCTCTGCTCGCATCTGCCGGAGCATATTCTATTGATTAACAGATCAATCGGGGGTAGAAGCTCgta < 2:2926689/136‑3 (MQ=255) gaaaTTTATATTTCTGTCGATTCAACTGTTCTAACGTTTGGATAGAGCAAAAATCAAGGGGGGTTGGGGCAGTTTCTCTGCTCGCATCTGCCGGAGCATATTCAAGTTATTAACAGACCAATCTGGTGATGAAGATCGaa < 2:4207310/137‑1 (MQ=255) cactgctATCTTGCCGCCGATTCACCTGTTCCCCCGTATGCAGCCAGCACAAAGCAAGGGGCCTGGGGCCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGaa < 2:811599/134‑1 (MQ=255) caTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGaaaa > 1:4691307/1‑140 (MQ=255) aTTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAAc > 1:4896977/1‑140 (MQ=255) ttATCTTGCTTGACATTCACCTGTCCAAACGTCCGCAGACACCACAACTCCCGGGGGGTGGGGGCAGTGTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAt < 1:679595/140‑1 (MQ=255) ttATCTTGCTGGCTATTCACCTGTTCAAACGTATGGGGACAGCACCACTCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACAt < 2:542742/140‑1 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:219859/1‑140 (MQ=255) cTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGaa > 2:1487387/1‑140 (MQ=255) taTTCAAGTGTTCCACAGTAGTGAGCGAGCACAACTCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAggg < 2:3994867/139‑1 (MQ=255) ttCATCTGTTCAACAGTCTCGCGCCCGCACAAATCCAGGGGGGCTCGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCCTATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCa < 2:1741160/140‑1 (MQ=255) gaggacAAGCGTCTGGAGACTGCACACCGCCCGTGGGGGCGGGGCAGTTTCTCGGCGCGCATCTGCCGGAGCATAGTCAACTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACACTTGTGGAAGACGGCAGGCtt < 1:4404290/135‑1 (MQ=255) tGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTc > 2:3090493/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 2:4921969/1‑140 (MQ=255) ttCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAg > 2:250344/1‑140 (MQ=255) ccaaCGTCTGGAGCAAGCACACATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCTTATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc < 2:4539632/138‑1 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 2:597252/1‑140 (MQ=255) cAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGc > 2:3778310/1‑140 (MQ=255) tATCGAGACAGCACATCTCCAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt < 2:253308/140‑1 (MQ=255) aaTGGAGACACCACAAATCATGGGGGCTGGGCGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCt < 2:3210979/139‑1 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:4628817/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:4730770/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:3918675/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 2:120798/1‑140 (MQ=255) tGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTg > 1:2794637/1‑140 (MQ=255) aCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAtgtg > 1:3861844/1‑140 (MQ=255) aCAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGAtgtg > 1:962872/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGTGCAGGCTTCAGGCGATTCTTTATGTGAt > 2:5147290/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 2:198848/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAt > 1:3130261/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTCGCGGCTCTCATCTGCCGGAGCAGATTCAAGTGATTAACAGAGCAATCGGGGGAAGACGCTCGACAACATTTGTGTAAGAGGGCAGCCTTCAGGCGATTCTTGATGTGAt > 2:2843747/1‑140 (MQ=255) aGCACAAATCAAGGGGGGTGGGGGCAGTTTATCGGATCGCATCTGCCGGAGCATATTAAAGTGATTAACATATCAATCGGGGGAAGAAGCTCGAAAACATTTGTGCAAGAGGGAATGCTTCAGGCGATTCTTGATGTGAt > 2:3627149/1‑140 (MQ=255) gCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGAtt > 1:1721824/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTc > 2:1379528/1‑56 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:3453764/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:3959444/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:5123525/1‑140 (MQ=255) cacaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTg > 1:1427365/1‑140 (MQ=255) acaAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGa > 1:4110131/1‑140 (MQ=255) aTCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCg > 2:1975266/1‑140 (MQ=255) | CACCGGTTTTTTCAAGGGAAGAGCTGTCCATGATTGATGCCATATGAAACGAAAAAAACGAGGGGGAATGAGAAATGGCAAATCACATTTATCTTGCTGGCGATTCAACTGTTCAAACGTATGGAGACAGCACAAATCAAGGGGGGTGGGGGCAGTTTCTCGGCTCGCATCTGCCGGAGCATATTCAAGTGATTAACAGAGCAATCGGGGGAAGAAGCTCGAAAACATTTGTGGAAGAGGGCAGGCTTCAGGCGATTCTTGATGTGATTGAGCCG > NZ_CP034943/755392‑755666 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |