| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 986,786 | C→A | 10.0% | Q367K (CAA→AAA) | spoVR → | stage V sporulation protein SpoVR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 986,786 | 0 | C | A | 10.0% | 705.3 / 23.8 | 273 | Q367K (CAA→AAA) | spoVR | stage V sporulation protein SpoVR |
| Reads supporting (aligned to +/- strand): ref base C (113/124); new base A (2/33); total (115/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.75e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 280 total aligned reads displayed.
AGAAATGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCT > NZ_CP034943/986647‑986924 | aaTGAAGAAAATTGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCaaa > 2:4147772/1‑140 (MQ=255) aagaaAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACa < 2:4047134/140‑1 (MQ=255) gaaAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAgg > 2:213519/1‑140 (MQ=255) gaaAATGGGAGTGAAGCCTGGCTAAGGCATTGAGAAAATGTATGAGGACAGGGAAATTGAATCCGATATCTCTTTCATACCCAATTAATTAAAAAAACACTAAGTTATACCCGAGCATCTTTAATTGATTCAAAAACAgg > 2:3170827/1‑140 (MQ=255) aaaTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGCGGACAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGGTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGc < 2:1299266/140‑1 (MQ=255) aaTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa < 2:957701/140‑1 (MQ=255) aaTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa < 2:2235316/140‑1 (MQ=255) aaTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa < 2:4101111/140‑1 (MQ=255) atcggactGAAGCCTGTCGCAGGCAGTGAGAAACTGTTTGAGGTCAGGGAACTTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCTAGGATCTTTATTTGTTTCAAAAACAGGGCag < 2:3023506/133‑1 (MQ=255) aggggCGTGAAGCCTGGCTCAGGCAGGGAGTAACTGTTTGAGGGCAGGGAAATTGACTCCGATATCTCTTTCAGCCGCAATGACTTAACAAAACACTGAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCag < 2:1676689/138‑1 (MQ=255) aTGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCag < 2:4091968/140‑1 (MQ=255) tGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 1:4670875/140‑1 (MQ=255) tGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 1:5140049/140‑1 (MQ=255) tGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 1:4207713/140‑1 (MQ=255) tGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCaga < 2:3339014/140‑1 (MQ=255) gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 1:488125/1‑140 (MQ=255) gCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGGCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGAGTTCGGTATGCGCGGGGCTCTTTATTTGTTTCAAAAACAGGGCAGAGAt > 1:1781683/1‑140 (MQ=255) tGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATtat > 1:1662254/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTCGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAtcg > 1:559109/1‑140 (MQ=255) tGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCaaaaa > 2:484461/1‑118 (MQ=255) tGGCTCAGGCAGGGAGAAAATGGTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGAGCGAGGATCTTTATTTGTTTCAAAAACAGTGCAGAGATTATAAAAtcg > 1:1892978/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa > 1:577419/1‑140 (MQ=255) aggcaggGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATATTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACa < 1:4492641/140‑1 (MQ=255) ggAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAAt > 2:1432697/1‑140 (MQ=255) gagaAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATg > 2:2740911/1‑140 (MQ=255) gagaAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATg > 2:1941031/1‑140 (MQ=255) aaTGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTAAAAAACAGGGCAGAGATTATAAAATAGTCTACAAAGAATGGAAAt > 2:635393/1‑140 (MQ=255) aTGTTTGAGGTCAGGTAAATTGAATCCGATATCTCTATCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATATTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATc < 2:1218607/140‑1 (MQ=255) tttGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGt > 1:2158016/1‑140 (MQ=255) tGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAc > 1:1006332/1‑140 (MQ=255) tGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAc > 2:1842047/1‑140 (MQ=255) ggTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAACAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAcgcg < 2:885745/140‑1 (MQ=255) ggTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTAcgcg < 2:2158759/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:3828782/140‑1 (MQ=255) tCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 2:1410134/140‑1 (MQ=255) aGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa < 1:4747549/94‑1 (MQ=255) aGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCa > 2:4747549/1‑94 (MQ=255) gAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAg < 2:1643554/140‑1 (MQ=255) aTCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAAACGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCa < 1:5071753/140‑1 (MQ=255) ccGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATg < 1:3830309/140‑1 (MQ=255) tatCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCggg < 2:2012155/140‑1 (MQ=255) tatCTCTTTCATCCGCAAGTACTTAACAAAAGACTTAGTTAAGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCggg < 2:838788/140‑1 (MQ=255) ctctTTCATCCGCAATTACTTAACAAAAGACGGAGTGATGCGCGAGGATCTTTATGTGTTTCAAAAACAGGGCAGAGAGGATAAAAGCGTCGACAAAGAATGGACATCGGTACGCGACCAGCTCGTGAGCGTGCGGGTac > 1:2385529/1‑139 (MQ=255) tCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAcggc > 2:3560858/1‑140 (MQ=255) tCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAAcggc > 2:4781380/1‑140 (MQ=255) tCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCggg > 1:1112387/1‑140 (MQ=255) ccGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGt > 2:4413391/1‑140 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGAc < 1:991893/107‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt > 1:3157890/1‑140 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:2274216/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 1:1825326/140‑1 (MQ=255) gCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGttt < 2:4870358/140‑1 (MQ=255) aaTTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTcc > 1:2488895/1‑140 (MQ=255) aaTTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCGCGTGAGCATGCCGGTAAACGGCGGGTTTcc > 2:3793217/1‑140 (MQ=255) ttAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATAttt > 1:3276895/1‑140 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATAGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa > 2:5182323/1‑140 (MQ=255) aaCAAAAGACTTAGTTATGCGCGAGGATCTTTATTTCTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTgt < 2:1096096/140‑2 (MQ=255) cAAAAGACTTAGTTATGCGCGGGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa < 2:1781683/140‑1 (MQ=255) aaGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACa > 1:3059285/1‑137 (MQ=255) ttttATGCGCGAGTATTTTTTTTTTTTTCAAAAACAGGGCAGATATTATAAACACGGCGACAAATAATGCAAATCGGGCCGCTACCAGCTCGGGAGCATGGGGGTAAACGGCGGTTTGCCATATTTGACAGTAAacgacg < 1:4007316/138‑1 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGa > 2:1088327/1‑128 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAacgacg > 1:2933932/1‑140 (MQ=255) aGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAATAAacgacg > 2:3621034/1‑140 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAt > 1:4370144/1‑140 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAt > 1:2080208/1‑140 (MQ=255) tGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGAt > 1:3010400/1‑140 (MQ=255) cgcgTGGTTATTTATTTTTTTAAAAAACAGTGAAGAGATTATAAAATCGTCTAAAAAGAAGGTAATTCGTTACGCGACCAGCTCGTGAGCTTGGGGTTAAACGGGGGTTTTCAATATTTGACAGTACACGACGGTGATTa < 1:1314694/140‑1 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGCGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTACACGACGGTGATTa > 2:2330374/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 1:4303320/1‑140 (MQ=255) cgcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTa > 1:2718536/1‑140 (MQ=255) gcgAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTAc > 2:470791/1‑140 (MQ=255) gagAGGATCTTTATTTGTTTAAAAAACTGTGCTCATTTTATAAACTCGTCCACAAAGAATGTAAATGGGTACGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTGTCCATATTTGAAAGTAAACGACGGTGATTAc < 2:3914080/138‑1 (MQ=255) aGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATg > 2:2840691/1‑140 (MQ=255) ttATTTGTTACAAAACCAGGCCAGATATAATAAAATCGGCGACAAAGACTGGAAATGGGTACGCGACCAGCTGGTGAGCTGGCGGTTAAACGGCGGTTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATa < 1:3352886/140‑1 (MQ=255) tttttttTCAAAAAATGGGCAGTCATTTTAAAAGCGTCTACAATGAATGGAAAGCGGTCCGGGACCAGGTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACATTACACGACGGTGATTACATGAAAAATAAc < 1:3667185/139‑1 (MQ=255) tttttttACAAAAACCGGGAAGCCATTATAACACGTTCGAAAAACAATGGAAATCGGCCCGCGACCAGCACGTGCGCAGGGGGGTAACCGGCGGGTTTCAATATTTGACAGAAAACGACGGTGATTACATGAAAAATAAc < 1:707240/139‑1 (MQ=255) ttttGTGTCAAAAACAGGGCCGAGATTTTAAAAGCGTCGACAAATAAGGGAAATCGGTACGCGACCTGCGGGTGCGAATGGGTGTAAACGGGGGGTTTCCATATTTGACAGTACACGACGGTGATTACATGAAAAATAAc < 2:709247/139‑1 (MQ=255) aTTTTTTACAAAAACTGGGCAGAGTTTAAAAAATCGTCGAAAAAGAATGTAAATCGGTCCGCGACCAGCTCGTGAGCATGCGGTTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:1041000/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGCGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTTAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:1127622/140‑1 (MQ=255) aTTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCTTGCGGGTAAACGGCGGTTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:2264208/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGGCAGATATTATAAAAGCGTCGACAAAGAATGTAAATCGGACCGCGACCAGCTCGTCAGAATGCGGGAAAACGGCGGGTTTCCATATTTCACAGTAAACGACGGTGATTACATGAAAAATAAc < 1:880932/140‑1 (MQ=255) aTTTGTTTAAAAAACAGGCCAGAGTTTATAAAACCGTCGACAAAGAATGGAAATCGGTACGCCACCAGATCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAAc < 2:4606324/140‑1 (MQ=255) ttttAAAAACCCGGCCAGAGTTTATAAAATGGTCCACAACTATTGGAAATGGGTACGCGACCAGCTCGTTCGCAGGCGGGTAAAGGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 1:4899062/139‑1 (MQ=255) gTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAga > 2:3252888/1‑139 (MQ=255) gTTTAAAAAACAGGGCATATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGc < 2:3145552/140‑1 (MQ=255) tttCAAAAACAGGGCATCTATTTTAAAATCTTCGACAAAGATTGGAAATCGGTACGCGACCAGATCGTGAGCATGCGGGTAAAGGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:5100721/140‑1 (MQ=255) tttCAAAAACAGGGCAGATATTATAAAATCTTCTAAAAAGAATGGAAATCGTTACGCGACCAGATCGTGAGAATGCGGGTAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:2307851/140‑1 (MQ=255) tttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGATTGCAAATCGGTACGCGACCAGCTGGTGAGAATGCGTGTAAACGGCGGGTTTCAATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3466764/140‑1 (MQ=255) tttAAAAAACTGGGCAGATATTATAAACTCGTCCAAAAACTATGGAAATCGGTACGCCACCAGCTCGTGAGAATGCGGGTAAACGGGGGGTTTCAATTTTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3733427/140‑1 (MQ=255) tttAAAAAACTGGGCAGAGTTTATAAAATCGTCGACAAAGATTGGAATTCGGTACGCTACCAGCTCGTGAGCATGCGGGTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:2457964/140‑1 (MQ=255) tttAAAAAACAGGTCACAGATTATAAAATCTTCGACAAAGATTGTAAATCGGTACGCGACCAGCTCGTGAGCTTGCGGTTAAACGGCGGTTTTCCATTTTTGACAGTAAACGACTGTGATTACATGAAAAATAACGAGct < 2:3672/140‑1 (MQ=255) tttAAAAAACAGGGCAGATATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:4999140/140‑1 (MQ=255) tttAAAAAACAGGGCAGAGATTATAAAATCGTCGAAAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGGGGGTAAACGGCGGTTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:2943770/140‑1 (MQ=255) tttAAAAAACAGGGATGAGATTATAAAATCTTCGACAAACAATGTAAATCGGTACGCCACCAGATCGTGAGCTTGCGGTTAAACGGCGGGTTTCCATATTTGACTTTAAACGACGGTGATTACATGAAAAATAACGAGct < 1:3589713/140‑1 (MQ=255) tttAAAAAACAGGGAAGAGATTATAAAAGCGTCGACAAATATTGCAATTCGGTACGCGCCCAGCTGGTGAGCAGGGGGGTAAACGGGGGTTTTCAATATTTGACAGTACACGACGGTGATTACATGAAAAATAACGAGct < 1:391185/140‑1 (MQ=255) tttAAAAAACAGGCCATACATTATAAAATCTTCTACAAAGAATGGAAATCGGTACGCGACAAGCTCGTGAGAATGGGGTTAAACGGGGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:4771099/140‑1 (MQ=255) tgacAAAAACAGGGCAGAGATTATAAACGCGCCGACAAAGAGGGCAAACGGGGACGCGACCAGCTCGTTAGCAGGCGGGTAAACGGCGGTTTTCCATATTGGACAGGAACCGACGGTGATTACATGAAAAATAACGAGct < 2:4916054/137‑1 (MQ=255) ttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct > 1:2554776/1‑139 (MQ=255) ttCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGct < 2:2554776/139‑1 (MQ=255) tCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGctct > 1:2952502/1‑140 (MQ=255) | AGAAATGAAGAAAATGGGCGTGAAGCCTGGCTCAGGCAGGGAGAAAATGTTTGAGGTCAGGGAAATTGAATCCGATATCTCTTTCATCCGCAATTACTTAACAAAAGACTTAGTTATGCGCGAGGATCTTTATTTGTTTCAAAAACAGGGCAGAGATTATAAAATCGTCGACAAAGAATGGAAATCGGTACGCGACCAGCTCGTGAGCATGCGGGTAAACGGCGGGTTTCCATATTTGACAGTAAACGACGGTGATTACATGAAAAATAACGAGCTCT > NZ_CP034943/986647‑986924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |