| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,097,430 | C→G | 8.7% | S58C (TCT→TGT) | EO946_RS05675 → | MarR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,097,430 | 0 | C | G | 8.7% | 600.6 / 2.3 | 233 | S58C (TCT→TGT) | EO946_RS05675 | MarR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base C (118/87); new base G (4/11); total (122/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.93e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
GAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAA > NZ_CP034943/1097291‑1097568 | taaTTATATGCGGAGCTCATTCATCAGCAGCAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGTCGAATTGAAGAAGCTCTATGTCGAGCTCGGGAGTAAATCTCAAGTATCGATGACAGAAATTCATGttctttc < 2:1723901/139‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 1:2886346/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 1:1214675/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:4089464/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 1:1931022/140‑1 (MQ=255) aTTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTtctttctt < 2:2381802/140‑1 (MQ=255) tGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGACTTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTg > 1:5022284/1‑140 (MQ=255) tGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCTATGACAGAAATTCATGTTCTTTCTTGTGTTg > 2:1061769/1‑140 (MQ=255) tGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTg > 2:1867424/1‑140 (MQ=255) tGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTg > 1:1709097/1‑140 (MQ=255) gCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTATAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTgg < 2:1888414/140‑1 (MQ=255) cGGAGCTCATTCATCAGCAGGAGAACTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 1:1021639/140‑1 (MQ=255) cGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 2:1127566/140‑1 (MQ=255) cGGAGATCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTggg < 2:4652139/140‑1 (MQ=255) ggAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTgggg > 1:4865253/1‑140 (MQ=255) ggAGCTCATTCATCAGCAGGAGAAAGGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTgggg > 1:3364226/1‑140 (MQ=255) aGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAc > 2:4442629/1‑140 (MQ=255) gCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑a < 2:822179/140‑1 (MQ=255) gCTCATTCAGCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAATCTCGATGTCGAGCACGGGAGTAAATCTCAAGTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑a < 1:505082/140‑1 (MQ=255) tcattcatCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑act > 2:4007280/1‑138 (MQ=255) cattcatCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATg < 1:3452059/140‑1 (MQ=255) ttcatCAGCAGGAGAACTGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGaa < 2:536846/140‑1 (MQ=255) cagcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACcaat < 2:3385778/140‑1 (MQ=255) agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTTTGTTGGGGAC‑AATTAACcaatc > 2:1249814/1‑140 (MQ=255) agcagGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACcaatc > 1:4834876/1‑140 (MQ=255) gagaCATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGt < 2:4848813/140‑1 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGt > 2:894915/1‑140 (MQ=255) gagaAATGGGAGGGGCTCATTAAAGCCTTGGTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGt < 2:2518255/140‑1 (MQ=255) agaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTc < 2:4352577/140‑1 (MQ=255) gaAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCa > 1:5185068/1‑140 (MQ=255) aGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTAtt > 1:3837176/1‑140 (MQ=255) ggggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGATCACGTGAGTAAATCTCAATTATCTATGAAAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTAACGTCTATTg > 2:3173295/1‑140 (MQ=255) gggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGc > 2:3404548/1‑140 (MQ=255) gggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGc > 2:1467574/1‑140 (MQ=255) gggCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTACTTTCTTGTGTTGGGGAC‑AATGAAACAATCAATGTCACGTCTATTga > 1:2972402/1‑139 (MQ=255) gCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTGTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAg > 2:1738801/1‑140 (MQ=255) tCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGaa < 1:4442629/140‑1 (MQ=255) cATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGaaa > 1:1409211/1‑140 (MQ=255) cATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGaaa < 1:2009059/140‑1 (MQ=255) ttAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGaaaaa > 1:2323942/1‑140 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa > 2:31085/1‑140 (MQ=255) gCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGaa > 2:1826048/1‑140 (MQ=255) cTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATa < 1:3124632/140‑1 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTGTATTGCAGAAAAAATGAATACg > 2:2825679/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg < 2:4534106/140‑1 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:4686072/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:416308/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 2:3588288/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:738052/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:213272/1‑140 (MQ=255) ttttGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCAAGTCTATTGCAGAAAAAATGAATACg > 2:3954961/1‑140 (MQ=255) ttttGGCTCACGAAGTGAAGAAGCTAGATGTCGAGCACGGGCTTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGACCCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACg > 1:2422928/1‑140 (MQ=255) tGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCATAAAAAATGAATACGACa < 2:3730800/140‑1 (MQ=255) tgaattgaattAGCTCGATTTCTAGAACGGTATTAAATCTAAATTATCGTTGACATAATTTAATTTTCTTTTTTGTTTTGGGTAC‑AATGAACCAATAATTTTCACGTCTTTTGCAGAAAAAATGAATACGAAAAAAGCGa < 2:3802269/139‑1 (MQ=255) cGAATTTAAGAAGGTCGATGTCGAGCACGGGAGTAAATCTCAAGTAGCGTTGACAGAATTTCTTTTTCTTTCTTGTGTGGGGTAC‑AATGAACCAATAAATGTAAGGTCTATTGCACAAAAAATTAATCCGACCAAAGCGa < 2:4801610/140‑1 (MQ=255) tGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTa > 1:4620979/1‑140 (MQ=255) cttgttGTCGAGCCGGGGAGTAAATCTCAATTTTCGATCACATAAATTAATTTTTTTTGTTGTTTTGGGCAC‑AATTAACAAATCAATGTCACGTCTTTTCAAGAAAAAATCAATACCACAAAAGCGACTGTATCGCGCAt < 2:3313784/135‑1 (MQ=255) ctggttGTCGAGCACGGTAGTAAATCTAAATTATCGATGAAATAAATTAATTTTTTTTCTTGTTTTGGGCAA‑AATCAACAAATAAATTTCACGTCTATTGAAGAAAAAATGAATACCAAAAAAGCGACTGTATCGCGCAt < 2:203428/135‑1 (MQ=255) ctctATGTCGAGCAGGGGATAAAATATAAATTAGCGATCACACAATTTCTTGTTCTTTCTTGTGTTGGGTAC‑AATCAACCAATCAATGTCACGTATATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt < 2:3509086/140‑1 (MQ=255) cTCGTTGTGGAGCACGGGATTAAATCTAATTTATCTATGACAGAATTTATTTTTCTTTGTTGTTTTGGGTAA‑AATTAACAAACCAATGGCACTTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCAt < 2:4782593/140‑1 (MQ=255) tgtctcgCACGGTATTACATCTCATTGAGCGATCACAGACATTCTTGGTGTTTCTT‑TGGGGGGGTCAAATGAACCATTCATTGTCCGGTCTATTGAAGAAAATATGAATCCGAAAAAAGCGACTGTATCGCGCATCAGca < 2:2632640/134‑1 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGt < 2:2766807/79‑1 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:683080/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:2850403/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:4802118/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:3097333/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:3503433/1‑140 (MQ=255) aGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACaaaa > 1:1876175/1‑140 (MQ=255) gAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCg > 1:80914/1‑140 (MQ=255) aaTCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGcgcg > 2:806792/1‑140 (MQ=255) aaTCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGcgcg > 1:1488603/1‑140 (MQ=255) aaTCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGcgcg > 1:1546892/1‑140 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTGTTGTGGTGGGGCC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGttg > 1:2578150/1‑139 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGttt > 1:1986866/1‑140 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGttt > 1:344074/1‑140 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGttt > 1:2212202/1‑140 (MQ=255) cAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGGCTATTGCAGAAAAAATGAATACGACAACAGCGACTGTATCGCGCATCAGCACAATATTGCTCGGCGCGGGttt > 1:3283368/1‑140 (MQ=255) aaTTATCTATGACATAATTTCTTGTGATTTTTTGTGTTGGGGAC‑AATCAACCAATCAATGTCACGTATTTTGCATAAAAAATTAATACGCCAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 1:1093280/140‑1 (MQ=255) aaTTATCGTTTACATAAATTCATTTTCTTTCTTGTGTTGGGTAA‑AATCAAACAATAAATTTCACTTCTATTCCACAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:5033805/140‑1 (MQ=255) aaTTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCCTCAGCACAAAATTGCTCGGCGCGGGTTTc > 2:5012655/1‑140 (MQ=255) aaTTATCGATGAAAGAAATTCAGTTTCTTTCTGGTGTGGGGGAC‑AATGAAACAATCAAGGTCACGTATATTGCATAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTc < 2:55240/140‑1 (MQ=255) ttATCGATGACATAATTTATTGTTTTTTCTTGTGTTGGGGAA‑AATGAACAAATCAATGTCACGTCTTTTGCACAAAAAATTAAAACCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCt < 1:894915/140‑1 (MQ=255) tCGATGACAGAAATTCTTGTTCTTTGTTGTGTTGGGGAC‑AATGAAACAATCATTGTCACGTCTTTTGAAGAAAAAATTAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:3588288/140‑1 (MQ=255) tCGATCACATAATTTATTTTTTTTTGTTGTTTTGGGGAA‑AATTAACAAATAAATGTCAGGTATATTGCACAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:4214921/140‑1 (MQ=255) gctaTGACACAATTTATTGTTGTTTTTTGTGTTGGGCAC‑AATCAACCAATCATTGTCACGTCTTTTGCACAAAAAATGAATCCCACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTca < 1:4566214/137‑1 (MQ=255) gaaataaaTTATTGTTCTTTCTTTTGTTGGGCAC‑AATGACACAATCATTGTCAGGTATATTGCAGAAAAAATTAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa < 1:1374013/135‑1 (MQ=255) gaaataaaTTAATTTTCTTTCTTGTGTTGGGCAC‑AATCAACAAATAAATGTCACTTATTTTCCATAAAAAATGAATCCCAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa < 1:271162/135‑1 (MQ=255) gACATAAATTCATGTGATTTCTTGTGTTGGGCAA‑AATCAACCAATCAAGGGCAGTTATATTGCATAAAAAATGAATACCCCACCCGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa < 1:1609032/140‑1 (MQ=255) gACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa > 1:4632288/1‑140 (MQ=255) cacacAAATCCCTGTTCGTTCTTGGGTGGGCCCC‑AAACAACCAACCAATGCCACGCCTATCCCACAAAAAACCACTCCCCCACACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGaa < 1:2750390/139‑1 (MQ=255) cataatttCTTGTTCTTTCTGGTTTTGGGCAC‑AATTAACCAATCATGTTCACTTCTTTTCCAGAAAAAATAAAAACCAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 1:1146105/134‑1 (MQ=255) cataaaTTCATTTTGTTTCTTGTGTGGGGGAC‑AATCAACCAATCAATGTCACGTCTATTGCACAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:242043/137‑1 (MQ=255) aataaaTTAATGTTATTTCTTTTTTTGGGCAC‑AATGAACAAATCAATGTCACGTATATTGAAGAAAAAATGAATACGACAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:3893505/137‑1 (MQ=255) aataaaTACAGGTTTTTTCTTGTGTTGGGCAC‑AATGAACCAATCAATGTCAGTTTTATTCCATAAAAAATTAATACTAAAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAaca < 2:1622989/137‑1 (MQ=255) aaaTTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAg > 1:4370528/1‑140 (MQ=255) tttgtttctgGTTTTGGGGAA‑AATTAACCAATAAATGTCACTTTTATTGCAGAAAAATTTAATACTCCAAACGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 2:460249/136‑1 (MQ=255) gtgctttcttGTGTGGGGGAC‑AATGAACCAATCAATGTCAGGTCTATTGCAGAAAAAATTAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 2:4361222/137‑1 (MQ=255) gTTTTTTCTTGTGTTGGGGAA‑AATTAACAAATCAATGTCACTTATTTTGAACAAAAAATGAATACCACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:3954961/140‑1 (MQ=255) gTTCTTTGTTGTGTTGGGCAC‑AAGCAACCAATCAATGTCACGTATTGTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:1425850/140‑1 (MQ=255) gTTCTTTGTGGTGTTGTGCCA‑AATTAACAAATCATTTTCACGTTTATTCAATAAAAAATTAATCCGAAAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGa < 1:3924822/140‑1 (MQ=255) | GAATTATATGCGGAGCTCATTCATCAGCAGGAGAAATGGGAGGGGCTCATTAAAGCCTTTTTGGCTGACGAATTGAAGAAGCTCGATGTCGAGCACGGGAGTAAATCTCAATTATCGATGACAGAAATTCATGTTCTTTCTTGTGTTGGGGAC‑AATGAACCAATCAATGTCACGTCTATTGCAGAAAAAATGAATACGACAAAAGCGACTGTATCGCGCATCAGCACAAAATTGCTCGGCGCGGGTTTCCTTCACAGAACACAGCTCAGCGATAACAA > NZ_CP034943/1097291‑1097568 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |