| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,293,328 | G→T | 10.7% | R134L (CGA→CTA) | EO946_RS06740 → | sigma‑70 family RNA polymerase sigma factor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,293,328 | 0 | G | T | 10.7% | 358.3 / 7.2 | 183 | R134L (CGA→CTA) | EO946_RS06740 | sigma‑70 family RNA polymerase sigma factor |
| Reads supporting (aligned to +/- strand): ref base G (92/55); new base T (2/25); total (94/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.67e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 189 total aligned reads displayed.
TCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCTATAAG > NZ_CP034943/1293189‑1293466 | tCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACg < 1:2401339/140‑1 (MQ=255)tCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACg < 2:2880815/140‑1 (MQ=255)tCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACg < 2:136308/140‑1 (MQ=255)tCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACg < 2:4696379/140‑1 (MQ=255) gCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATc > 1:4791450/1‑140 (MQ=255) tttGAGGCGGACGGACAGGTCACAGAAGAAGACAGAGAGAGAATCCAAGAAGCTTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATTAACGAATCGCTGAtcttct < 2:2898486/139‑1 (MQ=255) gAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCgg > 1:811332/1‑140 (MQ=255) gAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCgg > 1:2558793/1‑140 (MQ=255) gAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCgg > 1:690675/1‑140 (MQ=255) gAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCgg > 1:1018159/1‑140 (MQ=255) gAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCACTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAATGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCgg > 1:2914494/1‑140 (MQ=255) gCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTGAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGgtg > 1:3525819/1‑140 (MQ=255) gacggacAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTaaa > 1:154616/1‑140 (MQ=255) acggacAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGAtcttct > 2:5039184/1‑130 (MQ=255) cggacAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTaaaaa > 2:4165435/1‑140 (MQ=255) cAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATc > 2:172007/1‑140 (MQ=255) tttATCACTAGCAGACAGAGCGTCATTCCAATAAGCGTTTTCCGTGTTAACGGGCCGATAACATTAATGGTTTTGGCTGATTTTGGTAGTTTGATTTTTTTATGAACGAATCGCTGATCTTCTGGGTGTAAAAAAATCGa < 2:5187743/138‑1 (MQ=255) gttATCATAAGAATACAGATAGAGAACCCAAGACGCGTTATCCCTGTTAACGGGCAGATAAAAACAAATGTTTTTGCTGCATAAGTTAGAATGCTTTTCTTATCAACTAATCGCTGATCTTCTCGTTTTAAAAAAATCGa < 2:2510551/138‑1 (MQ=255) tATCATAAGAAGACAGAGAGAGACTCCAACAAGCGTTATCCCTGTTAACGGGAATACAAAAATAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACTAATCGCTGATCTTGTCGGTGTAAAAAAATCGACt < 2:4937227/140‑1 (MQ=255) aTCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACtg > 2:4874218/1‑140 (MQ=255) taataagaCAGAGAGACAATCCACTTAGCTTTATCCCTGTTAACGGCCATATAAAAACAAATTTTTTTGGTGCATAAGTTATAATGCTTTTCTTATTAACTAATCGCTGATCTTCTCGGTTTAAAAAAATCGACTGTGCa < 2:2748433/136‑1 (MQ=255) aagaCAGAGAGAGAATCCAATAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGGGTAAAAAAATCGAGTGTGCAAACg > 2:1926783/1‑140 (MQ=255) aagaCAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCTCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCATACg > 2:2827819/1‑140 (MQ=255) aagaCAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACg > 1:4587063/1‑140 (MQ=255) aagaCAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACg > 1:3908154/1‑140 (MQ=255) aagaCAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACg > 1:1789195/1‑140 (MQ=255) agagagaATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAATATCGACTGTGCAAACGACCATCa > 2:1524067/1‑140 (MQ=255) accccAACACGCGTTACCCCGGTTACCGGGCAGACAAAAATAATTGTTTTGGCTGAATACGGTAGATTGCTTTTCTTATGAACTAATCGGGGATCTTCCCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACggg < 1:1247623/137‑1 (MQ=255) aaTCAAACAAGCGTTATCCGTGTTAAGGGGCAGAGAAAACGAAAGTTTTTTGGTGCATACGGTCCAATGCTTTTTTTATGAACGACTCGGTGATCTTCTGGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACggg < 2:876619/140‑1 (MQ=255) aTCCAAGATGCGTTATCCCTGTTAACGGTCAGATAAAATTAAATGTTTTTGCGGCATAAGGTAGAATGCTTTTTTTATTACCTAATGGATGATGTTCTCGGTTTAAAAAAATCGAATGTGCAAACGACCATCAAACGGGc < 2:3882667/140‑1 (MQ=255) tCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACTACCATCAAACGGGCg > 2:3920377/1‑140 (MQ=255) tCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCg > 1:3988291/1‑140 (MQ=255) ccAAGAAGCTTAATCCCTGTTACCGGGAAGAGAAAAACAAATGTTTTTGCTGCATAAGGTAGACTCCTTTTCTTATGAACTAATCGCTGATCTTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGa < 2:2215001/140‑1 (MQ=255) cggCGTTATCCCTTTTAACGGGCAGACAAAAACAAATGTTTTTGCTGAATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGAGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTa < 2:3360857/138‑1 (MQ=255) aagCTTTAGCCGTTTTAACGGGCATATAAAATAAATTTTTTTTGCTGCTTAAGTTTTAATGCTTTTCTTATCAACCAATCGCTTATCTTCTCGTTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTa < 2:1661282/140‑1 (MQ=255) gctttATCCCTGTTAACGGGCATACAAAAATAAATGTTTTTGCTGCATAAGGTATATTTCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTaaa < 2:4549131/137‑1 (MQ=255) gCGTTATCCCTTTTAACGGGCATACAAAAAGAAATTTTTTTGCGCAATAAGGTTGAATGATTTACTTTTCAACCATTCGCTTATTTTCTCGTTTAAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTaaa < 1:2143631/140‑1 (MQ=255) gCGTTATCCCTTTTAACGGCCACAAAAAAAGAATTTTTTTTGCTCAATAAGTTAGAATGCTTTTCTTATCAACTAATCGCTGATATTCTGGTTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTaaa < 1:2752718/140‑1 (MQ=255) cGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAg > 1:657904/1‑140 (MQ=255) aTCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGc > 1:4979614/1‑140 (MQ=255) tacattttAACGGGAATATAAAAATAAATGTTTTTGCTGCATAATGTATAATTTTTTTATTATGAACTAATCGCTGATTTTATCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCa < 2:3943694/134‑1 (MQ=255) tCCGTGTTAAGGGGCATATAAAAATAATTGTTTTTGCTGAATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATGTTCTGGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCa < 1:259871/140‑1 (MQ=255) gTTAACTGGCAGAGAACAAGAAATGTTTTTTCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCTCTGATCTACTAGGTGTAAAAAAATCGACTGTGCAAACGACACTCAAAAGGGCGATCGTAAAGATGCAAAGAc > 1:2209391/1‑140 (MQ=255) gTTAACGGGCAGATAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGATGATCTTCTCCGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGTGCGATCGTAAAGATGCACAGAc > 1:1506252/1‑140 (MQ=255) gTTAACGGGCAGAGAAAATGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTGATGAACGAATCGCTGATCTTCTCGGTGTAAAAACATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGGAAAGAc > 2:557999/1‑140 (MQ=255) gTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGAc > 1:1521065/1‑140 (MQ=255) gTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGAGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAgct > 1:3360857/1‑138 (MQ=255) ttAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGAca > 2:4262838/1‑140 (MQ=255) ttAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGATGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGAca > 2:4327683/1‑140 (MQ=255) gggCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCagg > 1:1456012/1‑140 (MQ=255) ggCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCagga > 1:110745/1‑140 (MQ=255) ggCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCagga > 1:2816039/1‑140 (MQ=255) gagaAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCaggctgtc > 1:3943694/1‑135 (MQ=255) gagaAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGaa > 1:1249694/1‑140 (MQ=255) gTTTTTGCTGCCTCAGGTAGAATGGTTTTCTTATCAACGAATCGCTTATGTTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGc < 2:815248/140‑1 (MQ=255) tttttGCTGCATATGGTCTAATGCTTTTCTTAGCACCGAATCGCTGATCTTCTGGTTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCt < 1:2395298/140‑1 (MQ=255) ttttgGCTCCACAAGTTAGAAGGATTTTCTAAGGAACTAATCGGTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCt < 1:2949962/140‑1 (MQ=255) tAAGGTATTATTCTTTTCTTATGTCCGAATCCCTGATCTTCTCTGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATGGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGc < 2:3743884/140‑1 (MQ=255) tAAGGTAGACGCCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGc < 2:4994869/140‑1 (MQ=255) aagggTACAATGCTTTTATTATCACCCAATCGATCTTATTCTCGGTGAAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGc < 1:1896733/137‑1 (MQ=255) tattgattttCTTATGACCGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCAt < 2:3486996/134‑1 (MQ=255) aaTGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGACAGCTTGTCATa > 2:3829662/1‑140 (MQ=255) aaTGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATa > 1:897602/1‑140 (MQ=255) aaTGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATa > 1:508242/1‑140 (MQ=255) tGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACg > 2:2764816/1‑140 (MQ=255) ttttCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGGTCGCTTGCCGGGAAGCTTGTCATACGttt > 2:3558075/1‑140 (MQ=255) ttttCTTATGAACGAATCGCTGATCTTCTCGGGGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCTATCGTAAAGATGCAAAGACAGCAGGTGGAAAAGAAGCGATCGATTGCCTGAAAGCTTGTCATACGttt > 1:2038865/1‑140 (MQ=255) tttGTTTTGAACGAATCGCTGATCTTCTGGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 1:4470166/140‑1 (MQ=255) tttCTTATGAACGATTCGAGGATCTTCTGGTTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 1:307778/140‑1 (MQ=255) tttCTTATGAACGAATCGCTTATGTTATCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 2:2629176/140‑1 (MQ=255) tttCTTATGAACCACTCGCTTATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 2:2855931/140‑1 (MQ=255) tttCTTATCACCGAATCCCTGATCTACTGGGGTTAAAACAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 1:4446043/140‑1 (MQ=255) tttCTTATCAACGAAGCGCTGAACTTCTGGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 1:963081/140‑1 (MQ=255) tttCTAATGAACGAATCGATGATATTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTg < 1:4269536/140‑1 (MQ=255) ttccTTATTAACGACTCGGTTATCTTCTCGGTGTAAAAAAATCGACTCTGCAAACGAACATCAAACGGGCGATCGTAAATATGCATAGACAGCAGGAGGATATGAATCGATCGCTTGCCTGAAAGCTTGTGATACGTTTg < 1:461175/137‑1 (MQ=255) ttCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGc > 1:1618997/1‑140 (MQ=255) ttCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGc > 1:3166010/1‑140 (MQ=255) ttCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCGGAAAGCTTGTCATACGTTTGc > 2:2470037/1‑140 (MQ=255) ttCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATAAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGc > 1:50228/1‑140 (MQ=255) tCTTATTAACGAATCGCTTATCTTCTGGTTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc < 1:4128496/140‑1 (MQ=255) tCTTATGAACTAATCGCTTATCTTCTCGTTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc < 1:2760233/140‑1 (MQ=255) tCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc < 2:1249610/140‑1 (MQ=255) tCTAATGAACGAATCGCTTAGCTTCCCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc < 1:964440/140‑1 (MQ=255) tATTAACTAATCGGTTATGTTCTGGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCAcc < 1:1403651/140‑1 (MQ=255) tATGAACTAATCGCTGATCTTCTGGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCAcc < 2:5077375/140‑1 (MQ=255) tATGAACGAATCGCTTATCTTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCAcc < 1:4147893/140‑1 (MQ=255) tATGAACCAATCGCTTATCGTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCACACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCAcc < 2:3079898/140‑1 (MQ=255) aTGAACGAATCGCTTATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc < 2:1409777/136‑1 (MQ=255) aTGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGcc > 1:1409777/1‑136 (MQ=255) ttaaCTAATCGCTTATTTTCTCGTTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCta < 2:3271415/138‑1 (MQ=255) ttaaCGAATCGCTGATCTTCTGGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCta < 1:2248743/138‑1 (MQ=255) tGACCGAATCGCTGATCTTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCta < 2:2104446/140‑1 (MQ=255) tGAACGAATCGCTTATCTTCTCGTTGAAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCta < 1:420945/140‑1 (MQ=255) gAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCtat > 1:3657824/1‑140 (MQ=255) gAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCtat > 1:1365306/1‑140 (MQ=255) gAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCtat > 1:3719741/1‑140 (MQ=255) aaCTAAGCGCTGAGCTTCTCGGTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCtata < 1:570013/140‑1 (MQ=255) aaCGAATCGCTGATCTTCTCGGTGTAAAAAAAACGACTGTGCAAACCACCATCAAAAGGGCGTACGTAAAGTTGCAAAAAAAGCAGGAGGAAATGAATAGATCCCTTTGCAGAAAGCTTTTCAAACGTTTTACAccaaaa > 1:569167/1‑136 (MQ=255) aCGAATGGCTGATCTTCTGGTTTTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCTATaa < 2:2032267/140‑1 (MQ=255) cGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCTATAAg > 2:225678/1‑140 (MQ=255) | TCCAGCACGATGATGGTTGAGCCGGACGGACAGGTATCAGAAGAAGACAGAGAGAGAATCCAAGAAGCGTTATCCCTGTTAACGGGCAGAGAAAAAGAAATGTTTTTGCTGCATAAGGTAGAATGCTTTTCTTATGAACGAATCGCTGATCTTCTCGGTGTAAAAAAATCGACTGTGCAAACGACCATCAAACGGGCGATCGTAAAGATGCAAAGACAGCAGGAGGAAATGAATCGATCGCTTGCCTGAAAGCTTGTCATACGTTTGCCACCTATAAG > NZ_CP034943/1293189‑1293466 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |