| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 1,800,874 | A→C | 16.4% | S3519R (AGC→CGC) | EO946_RS09135 → | SDR family NAD(P)‑dependent oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 1,800,874 | 0 | A | C | 16.4% | 517.0 / 28.6 | 250 | S3519R (AGC→CGC) | EO946_RS09135 | SDR family NAD(P)‑dependent oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (132/67); new base C (2/49); total (134/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.63e-17 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 250 total aligned reads displayed.
ATTGATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAACGC > NZ_CP034943/1800738‑1801011 | aTTGATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGCAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCg > 2:3162580/1‑140 (MQ=255) gATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGAcc > 1:4741899/1‑140 (MQ=255) gATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGATCTCGTACCAGAAAAAAATAATAAAAgagaac > 1:3510359/1‑138 (MQ=255) aTCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCg > 2:2228867/1‑140 (MQ=255) tgtgCTTATTTTTAACGGATCACAAAGAGCTGTTCTAAGCATTTTACGGGGATTATGCGTGTTAGGAACAAAAGCCCCCTGAAGCTGATATGTAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCgg < 2:460870/137‑1 (MQ=255) tCGGCTTATTCTTAACGGATAACAAAGAGCTTATCTAAGCATTTTACCGGGTTTATGCGTCTGAGGCACAAACGCCCCCTGAAGCTTATATGTAATTTCCTGCAGATCTCGTACCAGAAACAAATAATATAAGCGACCgg < 2:1567196/140‑1 (MQ=255) cGGTTTATTCTTAACGCAACACAAAGAGCTGATCTAAGATTTTGACCGGGATTATGGGTCTGAGGCACAAAAGCCCCCTGAAGCTGATTTGTAAATTCCTGCAGCTCTCGTACCACAAAAAAATAATAAACGCGACCGGc < 1:1014261/140‑1 (MQ=255) ggCTTCTTCTTAACGGATCACAAAGACCTCATCTAAGCATTTTACCGGTATGATGCGTCTGAGGCAAAAAAGCCCCCTTAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCa < 2:4376303/140‑1 (MQ=255) cttcttcttAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATCAGCGACCGGCAAt > 1:201442/1‑140 (MQ=255) aaCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCg > 2:3731571/1‑140 (MQ=255) aaCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCg > 2:4889239/1‑140 (MQ=255) aCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGa > 2:3694624/1‑140 (MQ=255) aCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGa > 2:5034432/1‑140 (MQ=255) aCGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAAAATAATCGACCGGCAATCTCACGCCGa > 1:2277798/1‑140 (MQ=255) gATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGcc > 1:1989158/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:4833258/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:1028228/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:4264608/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:591142/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:809342/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:1386928/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:3151383/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:377580/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 2:3826982/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCt > 1:3085325/1‑140 (MQ=255) aTCACAAAGAGCTGATCGAAGCATTTTACAGGGATGATGCGTCTGAGTCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGAAGCTCTCGTACCAGAAAACAATAAAATAAGCGACCGCCAATCTCACGACGAGCCt > 2:1256546/1‑140 (MQ=255) cacaAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTAt > 1:3730204/1‑140 (MQ=255) cacaAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCGAt > 1:658473/1‑140 (MQ=255) aacgcgCTGACCGACGATTTTTCCGGGGTTGATGCGTCTGCGGCAAAAAAGCCCCCTGAAGCTGATATGTAATTTCGTGCAGCTGTCGTACCCGAAAACAATAATACACGCGACCGGCAATCTCACGCCGAGCCTATCGc < 1:4556618/135‑1 (MQ=255) aaaGTGCTTATCTAAGCTTTTTACCGGGATTATGGGTCTGAGCCAAAAACGCCCCCTGAAGCTGATATGCAAATGCCTGCAGCTCTCGTACCACAAAACAATAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGc < 1:29878/140‑1 (MQ=255) aaaGCGCTGATCTAACCATTTGACCGGGAGGATGCGTCTGAGGCACAAACCCCCCCTGAACCTGATATGCACAGTCCTGCAGCTCTCGTCCCCGAAAACAAGAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGc < 2:4085649/140‑1 (MQ=255) aaaCAGCTGATCGAAGCATTTTACCGGGAGGATGCGTCTGCGGCACAAAACCCCCCTCAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGc < 2:4492213/140‑1 (MQ=255) agagCTGATCGAAGCATTTTACCGGGATGATGCGTGTGAGGCACAAACGCCCCCTGAACCTGATATGGAAATTCCTGCAGCTATCTTCCCACAAAAAAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCa < 2:3303634/140‑1 (MQ=255) gCTGTTCGAAGCTTTTTACCGGGATGATGCTTCGGCTCAAAAAAAGCCCCCAGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCATAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta < 2:807323/140‑1 (MQ=255) gCTGATCGAAGCATTTTACCGGGATCATGCGTGTGAGGCAAAAAAGCCCCCTGACGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCatta < 2:1828816/140‑1 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAATCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 2:4149444/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 1:3532084/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 1:1287470/1‑140 (MQ=255) aTCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTgg > 1:2818555/1‑140 (MQ=255) tCGAAGCATTTTACCGGGATGTTGCGTCTGAGGCACAAAACCCCCCTGAAGATGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGc < 2:2294511/140‑1 (MQ=255) gAAGCATTTTACCGTGATGCTGCGTCCCAGGCCCAAACGCCCCCTCACGCTGATATGGAAATTCCCCCAGCTCACGAACCAGAAAACAATAATACACCCGACCGGCAATCACACGCAGAGCCTATCGCCATTATTGGCAt < 2:1051605/140‑1 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 1:1627168/1‑140 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 2:4556003/1‑140 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 2:4397737/1‑140 (MQ=255) aGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa > 1:4442933/1‑140 (MQ=255) aGCATTTTACCGGGATGAGGCGTCTGAGGCAAAAACCCCCCCTCACGCTGATATGGAATTTCCTGCAGCTCTCGGACCCTAAAACAAAAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa < 1:4048945/140‑1 (MQ=255) aGCATTTCACCGGTTTGTGGGGTCGGAGCCAAAAACGCCCCCTTAAGCTTATATGTAATTTCCGCCAGCTCTCGTACCATAAAAAAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGa < 1:1927554/140‑1 (MQ=255) ttttCCCGGTATGATGCGTGAGAGCAACAAACCCCCCCCCACGATCATCTTGAAATTCAGCCAGACCCCGAACAACAAAAAAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTgg < 1:4296805/140‑1 (MQ=255) tACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCGGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATAATTGGCATGAGTGGCAg > 2:2831840/1‑140 (MQ=255) aCCGGGAGGATGCGTGTCTGGCACAAACGCCCCCTGACGCTGATATGGAATGTCCTGCAGCTCTCGTACCAGAAAAAATTAATATCCGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAgg < 2:658473/140‑1 (MQ=255) cggggATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGt < 2:4238816/138‑1 (MQ=255) ggATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATCTGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGGATGAGTGGCAGGTTTc > 1:319975/1‑140 (MQ=255) ttgtggCGTCTGCGCCACAAACGCCCCCTTAAGCTGATATGGAACTTCCTGCAGCTCTCGTACCACAAAACAATAATAAACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:2925233/135‑1 (MQ=255) atgatgCGTCTGCGCCACAACAGCCCCCTGACGGTGATATGGAAATTCCGGCCGCTCGCGTACCACAAAAAAATAATATCAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:421193/140‑1 (MQ=255) atgatgCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCAGGAGTGGCAGGTTTCCt > 2:1525520/1‑140 (MQ=255) atgatgCCTCTGAGGCACAAAAGCCACGTTAAGCTCATATGCAAATTCCTGCAGCTCACGTACCAGAAACAATTACTAAAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCt < 1:2572726/140‑1 (MQ=255) tCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGa > 2:3210562/1‑140 (MQ=255) tCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGa > 1:5192632/1‑140 (MQ=255) cTGAGGCACAAAAGCCCCCTGAAGCTGATATGGACATTCCTGCAGCTCTCGTACCCGAAAACAATATTATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCAGTATTGGCATGAGTGGCAGGTTTCCTCAAGCGGAt > 2:2476322/1‑140 (MQ=255) tgcggCAAAAAAGCCCCCTGACGCTGATATGGAAATTCGTGCAGCTCTCGTACCACAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 1:1414953/137‑1 (MQ=255) tgcgccacaAACGCCCCGTGAAGCTGATATGCAAATTCGTGCAGCTCTCGTACCACAAAACAATATTATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 1:4503271/135‑1 (MQ=255) tGAGGAACAAAAGCCCCCTGAATCTGATAGGGAAATTCCTGCAGCTCTCGTACCACAAAAAAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 2:3483036/140‑1 (MQ=255) tGAGGAACAAAAGCCCCCTGAAGCTTATATGGAAATTCCTGCAGCTCTCTTACCACAAAACACTAATATCCGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 1:41705/140‑1 (MQ=255) ggAGGCACAAAAGCCCCTTGAAGCTTATATGTAAATTCCTGCAGCTCTCGGACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAtt < 2:1989227/139‑1 (MQ=255) gcggaacaAAAGCCCCCTGAATGTTATATGTAATTGCGGGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTc < 1:1481768/135‑1 (MQ=255) caACAGCCCCCTGAAGCGGATAGGGAAATTCCTGCAGCTGTCGTACCAGAAAACCATAATATCCGCTACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCa < 2:4202387/140‑1 (MQ=255) aaaaGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCAt > 2:2591931/1‑140 (MQ=255) acaGCCCCGGGAAGCTTATATGCAATTGCCTGCAGCTCGCGTACAACAAAACATTAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATg < 1:1872526/138‑1 (MQ=255) aaaGCCCCCTCAAGCTGATATGGAAATTCCTGCAGCTATCGTCCCTGAAAACAGTAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATg < 2:2033389/140‑1 (MQ=255) aaaGCCCCATTAAGCTTATATGCAAATTCCTGCAGATATCGTACCAGAAAAAAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGAAGGTTTCCTCAAGCTGATTCGGTCCATg < 2:3686345/140‑1 (MQ=255) aaaCCCCCCGGATGCTGATATGGAAATACCGGCAGCTGTCGTCCCACAAACCAATAAAATACGCGACCGGCAATCTCCCGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCCAGCTGATTCGGTCCATg < 1:2471167/140‑1 (MQ=255) aaGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGa > 2:1545589/1‑140 (MQ=255) accccccTGAAGCTGATATGCAAATTCCTGCAGCTATCGTACCACAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAg < 1:5045986/138‑1 (MQ=255) aGCCCCCTGAACCTGATATGTAATTTCCTGCAGCTCTCGTACCACAAAAAAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAg < 1:1375382/140‑1 (MQ=255) cccTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTAt > 1:3630205/1‑140 (MQ=255) cccTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTAt > 2:4047428/1‑140 (MQ=255) tcaGCTGATATGGAAATTCCTGCAGCTGTCGTACCACAAAACACTAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCCAGCTGATTCGGTCCATGAGCTATGGGa < 2:557058/138‑1 (MQ=255) taaGCTGATATGTAAATTCCTGCAGCTATCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGa < 2:5187584/139‑1 (MQ=255) gAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGa < 2:5064718/140‑1 (MQ=255) gAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGa < 2:1870743/140‑1 (MQ=255) gAAGCTGATATCGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGa < 2:3863098/140‑1 (MQ=255) aGCTGATATGGAAATTCCTGCAGCCCTCGAACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACa < 2:2637336/140‑1 (MQ=255) gATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCCTTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTCTGGGACActct > 2:2954116/1‑140 (MQ=255) gATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCt > 2:405060/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATACGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGAGTCGGTCCATGAGCTATGGGACAATCTg > 1:2233384/1‑140 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCa > 1:2406663/1‑78 (MQ=255) atatGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTg > 1:613612/1‑140 (MQ=255) atatGGAAATTCCTACAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATg > 1:335478/1‑123 (MQ=255) tCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCa > 1:2641408/1‑140 (MQ=255) tCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCa < 2:1627168/140‑1 (MQ=255) tGCAGCTCTCGTACCAGACAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCAGTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCAGGAGCTATGGGACAATCTGAAAAACGGCAAAc > 2:2060928/1‑140 (MQ=255) aGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACAtt < 2:3381299/140‑1 (MQ=255) gCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTg < 1:5012495/140‑1 (MQ=255) ctcGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTAt > 1:989426/1‑140 (MQ=255) ctcGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTAt > 1:3894071/1‑140 (MQ=255) ctcGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTAt > 2:2797392/1‑140 (MQ=255) ccAGAAAAAAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGa < 2:4741899/140‑1 (MQ=255) gAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGACAAACGGCAAACATTGTATCTCTGACAt > 2:2992960/1‑140 (MQ=255) aaaaCAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATc > 2:4992202/1‑140 (MQ=255) tataAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAAc > 1:2097565/1‑140 (MQ=255) | ATTGATCGGCTTCTTCTTAACGGATCACAAAGAGCTGATCGAAGCATTTTACCGGGATGATGCGTCTGAGGCACAAAAGCCCCCTGAAGCTGATATGGAAATTCCTGCAGCTCTCGTACCAGAAAACAATAATATAAGCGACCGGCAATCTCACGCCGAGCCTATCGCCATTATTGGCATGAGTGGCAGGTTTCCTCAAGCTGATTCGGTCCATGAGCTATGGGACAATCTGAAAAACGGCAAACATTGTATCTCTGACATCCCGAAAGAACGC > NZ_CP034943/1800738‑1801011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |