| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,139,461 | C→A | 14.7% | A126S (GCG→TCG) | deoD ← | purine‑nucleoside phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,139,461 | 0 | C | A | 14.7% | 856.7 / 39.1 | 380 | A126S (GCG→TCG) | deoD | purine‑nucleoside phosphorylase |
| Reads supporting (aligned to +/- strand): ref base C (225/85); new base A (2/67); total (228/152) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.94e-29 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 398 total aligned reads displayed.
TAATTTGCAAGCTTTTCGATTTGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGT > NZ_CP034943/2139322‑2139598 | tAATTTGCAAGCTTTTCGATTTGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGgcgc < 2:1319742/140‑1 (MQ=255) gCAAGCTTTTCGATTTGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATc > 2:3192599/1‑140 (MQ=255) aaGCTTTTCGATTTGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCaa > 2:4141952/1‑140 (MQ=255) tGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGc > 1:1025372/1‑140 (MQ=255) tGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGc > 1:3446763/1‑140 (MQ=255) gCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCg > 2:5197138/1‑140 (MQ=255) gCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCg > 2:1082389/1‑140 (MQ=255) cGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGAATCATAGGCATTTTTTAAAAGCTCTAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAAAGCGa < 2:2514195/140‑1 (MQ=255) aaTCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAAAGCGAct < 2:3498291/140‑1 (MQ=255) gggtTGTCGAACTGATCCGGTGTAAATCCGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATACGCATTTTTTAAACGCTCCAAATCTGCGCAAGGCGCAAAAACAATACTTCCGAAAGCGACTCTGtt < 2:4286396/138‑1 (MQ=255) atttagcAGGTGTAAATACGCTCCCGCCGGTCACGGGCCCGCCTTTATCCTTGGGGGAATCATAGCCATTTTTTAAAAGCTCGAAAGGTGCGCACGGCGAAAAATCAATCCTGCCCAAAGCGACTCTGTTCATTTGTGaa < 2:3293761/134‑1 (MQ=255) aCTTATCAGCTGTAAATACGCTTCCTCCCGACACCGGCACGCATTTATCCTTTGCGGAATCATAGGCATTTTTTAAAAGCTCCAAATCGGCGCACGGCGAAAAATCAATACTCCCCAACGCGACTCTGTTCATTTGTGaa < 1:2116863/140‑1 (MQ=255) cTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTGTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAAt > 2:4653319/1‑140 (MQ=255) ttaTCAGCTGTAAATACGCTTCCCCCGGCCCCGGGCACGCCTTTATCCTTTGCGGCATCATAGGAATTTTTAAAAAGCGCCAAAGCGGCGCAAGGCGCAAAATAAATCCTTCCGAACGCGACTCTGTTCATTTGTGAATc < 2:4214185/138‑1 (MQ=255) tGATCAGGTGTAAATACGCTGCCTCCCGGCCCCGGCACGCCTTTATCCTTGGCGGCATCATAGGCATTTTTTAAAAGCTCGAAAGCGGCGCAAGGCGAAAAATCAATACTTCCCAAAGCGACTCTGTTCATTTGTGAATc < 2:1551496/140‑1 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATAGTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:2694276/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:581602/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:8639/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:3908240/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:4541755/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:289079/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:1107034/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:1819745/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:2190791/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:2001819/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:2756108/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:1394155/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:1137639/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTATGTTCATTTGTGAATAAg > 2:2249406/1‑140 (MQ=255) cTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAg > 1:514725/1‑140 (MQ=255) cTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTGGCGGAATCATCGCCATTTTTTAACACCTCGAAATCTGCGCAAGGCCAAAAATAAATACTTCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAg < 1:5047952/140‑1 (MQ=255) cTGTAAATAAGCTTCCTAACGTCACCGGCACGCCTTTAACCTTTGCGGCATAATAGGCATTTTTTAAAAGCTCGAAAAATGCGCAAGGCGAAAAATCAATAATTCCGAAAGAGACTATGTTCAGTTTTGAATCAGTTGAg > 1:4296808/1‑140 (MQ=255) tgaaactACGGTCCCCACCGCCACCGGCCCGCCTTTAGCGTTTGCGGCACCATAGGAATTTTTTAAAAGCTCGAACTCTGCGCAAGGCGAAAAAACAAGACTTCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 1:4814742/134‑1 (MQ=255) tGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 2:1137639/140‑1 (MQ=255) ggTAAATACGCTTCCTCGCGTCCCGGGCACGCGTTTATCCTTTGCTGAATCATAGGCATTTTTTAATTGATCGAATGATGCTCAAGGCGCAAAATCAATACTGCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 2:2839083/139‑1 (MQ=255) aaTACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGt > 1:3093874/1‑140 (MQ=255) aCGCTTCCTACCGTCACCGGCACGCCTTTATCGTTTGGGGCATAATAGGAATTTTTAAAACGCACGAAATCTGCGCAAGGCGCAAAAACAATACTTCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCAt < 2:1791720/140‑1 (MQ=255) aCGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATCGGCATTTTTTAAAAGCTCGAAATCGGCGCAAGGCGCAAAATCAATACTTCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCAt < 2:3016959/140‑1 (MQ=255) aCGCTTCCAACCGTCACCGGCACGCCTTTATCCTTTGGGGCATCATCGGAATTTTTTAAAAGCACGAAATCTCCGCAAGGCGAAAAATCAATACTTCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCAt < 1:4229061/140‑1 (MQ=255) taatacTACCGACACCGGAAAGCATTTATCAAATGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:1504704/6‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATCGGCATATTTTAAAAGCTCGAAATCTCCGCACGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:2149635/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:1679537/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:141309/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:3190101/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:2332589/1‑140 (MQ=255) tCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGATTCAGTTGAGGATGTCATATCCa > 2:2485847/1‑140 (MQ=255) aCCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAAt > 1:377770/1‑140 (MQ=255) aCCGTCACCGGCACGCCTGTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATAGTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAAt > 1:2435667/1‑140 (MQ=255) gTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGAc > 1:658132/1‑140 (MQ=255) ccGGCACGCCTTTATCCTTTGCGGCATCATAGCCATTTTTAAAAAGCTCGAAAGCGGCGCAAGGCGCAAAATCAATACTCCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTcc < 2:2084252/140‑1 (MQ=255) gCACGCTTTTATCCTTTGCGGATTAATTGGCTTTTTTTAAAAGCTCGAAATCTGCGCACGGCGCAAAATCACTCCTCCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGc < 1:493233/140‑1 (MQ=255) gCACGCCTTTCTCCTGTGCGCCATCATCGGCATTTTTTAAAAGCTCGAAATCGGCCCACGGCGAAAAATAAATACTTCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGc < 1:4349405/140‑1 (MQ=255) gCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGc < 2:3684300/140‑1 (MQ=255) ccACGCCTTTATCCTTTGCGGCATAATAGGAATTTTTAAAAAGCTCTAAATCTGCGAAAGGCGAAAAAACAATACTGCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGc < 1:3384984/139‑1 (MQ=255) tATCCTTTGCGGCATCATCGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTGCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACa < 2:1457197/140‑1 (MQ=255) tATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACa > 1:4046975/1‑140 (MQ=255) ttGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATAGTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTg > 1:3553678/1‑140 (MQ=255) ttGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAACCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGACAAAATGACGTCCCGCACTGTGACATCTTTg > 1:1295594/1‑140 (MQ=255) ttcGGCATCATAGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGAGAATCTGTTCATTTGTGAATCAGTTGAGGATGTCATATCCAAAATGACTTCCCGCACTTTGACATCTTTGc > 1:1853578/3‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4511311/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:4839944/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:1791824/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:2531371/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:2639690/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:436118/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:106328/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:912039/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:3690932/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:3860285/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:3948284/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4738095/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4655094/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4616280/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACttt < 2:2212815/129‑1 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGAGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTTTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:788112/1‑140 (MQ=255) tGCGGCATCATACGCATATTTTAAAAGCGCGAAATATTAGCAAGTCGAAAAATCAAAACTTCCGAAAGAGACTATCATCATTTGTGAATCAGTTGAGGATGTCATAGACAAAATGACGACCCGAACTTTCACATAtttca > 2:2656505/1‑138 (MQ=255) atcgtcatcatAGGCATTTTTTAAAATCTCCAAATCTGCTCAATTCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:2392130/6‑140 (MQ=255) catcatAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATa > 1:5095962/1‑140 (MQ=255) tcatAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAgc > 2:767874/1‑140 (MQ=255) tAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGcgcc > 2:717688/1‑140 (MQ=255) gaaTTTTTTAAAAGCTCTAAATCTGCGAAAGGCGCAAAATCAATCCTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 2:377770/138‑1 (MQ=255) gCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACGTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 2:3560289/140‑1 (MQ=255) gCATTTTTTAAAAGATCGAAATCTGCGCAAGGCGAAAAAGCAATACTGCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 2:611982/140‑1 (MQ=255) gCATATTTTAAAAGCTCGAACTCTGCGCAAGGCGCAAAATCAATCCTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 2:4976945/140‑1 (MQ=255) ccATTTTTTAAAAGCTGTAAATCCGGCAAAGGCCAAAAATCAATAGTTCCCACAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 1:4882684/139‑1 (MQ=255) tttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGac > 1:2979202/1‑139 (MQ=255) tttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGaa > 1:3211263/1‑140 (MQ=255) ttAAACGCTCTAATTCGGCGAAAGGCGAAAAATCAATACTCCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCt < 1:5197138/140‑1 (MQ=255) tAAACGCTCTAAATCTGCGCAAGGCGCAAAAACAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTa < 2:341543/140‑1 (MQ=255) tAAAAGCTCTAAATGTGCGCAAGGCGAAAAATCAAAACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTa < 2:3933726/140‑1 (MQ=255) tAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTa < 1:106328/140‑1 (MQ=255) tAAAAGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTa < 2:2564546/140‑1 (MQ=255) cGAAATCTGCGCAAGGCGAAAAATCAATCCTCCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCttatt < 1:2055238/140‑1 (MQ=255) cGAAATCTGCGAAAGGCGAAAAATCAATACTGCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCttatt < 2:1025372/140‑1 (MQ=255) ggccAAGGCGCAAAACAAATAGTCCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTg < 2:372284/137‑1 (MQ=255) cgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGc > 1:2284992/1‑140 (MQ=255) cgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGc > 1:2741960/1‑140 (MQ=255) cgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGc > 1:162580/1‑140 (MQ=255) cgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGc > 1:3620719/1‑140 (MQ=255) ccgcAAAATCAATACTCCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCg < 1:4151277/139‑1 (MQ=255) | TAATTTGCAAGCTTTTCGATTTGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGT > NZ_CP034943/2139322‑2139598 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |