| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,147,508 | T→G | 6.3% | T173T (ACA→ACC) | EO946_RS10810 ← | CoA transferase subunit A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,147,508 | 0 | T | G | 6.3% | 447.0 / 12.4 | 159 | T173T (ACA→ACC) | EO946_RS10810 | CoA transferase subunit A |
| Reads supporting (aligned to +/- strand): ref base T (74/74); new base G (3/8); total (77/82) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.88e-01 | |||||||||||
Only 100 of 163 total aligned reads displayed.
CGCTTCTCACAACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCATTTGAT > NZ_CP034943/2147369‑2147647 | cTTCTCACAACCCCCTCGACAATAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCAGATTGCGCGCTGt > 2:2111291/1‑140 (MQ=255) cTTCTCACAACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGt > 2:1448685/1‑140 (MQ=255) cTTCTCACAACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGt > 2:1792640/1‑140 (MQ=255) cTTCTCACAACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGt > 1:4523914/1‑140 (MQ=255) cTTCTCACAACCCCCTCGAAAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGCGACGATCCTCTCAGCTTCGGCAAAGGTTATCCTGGCAGCCATTGCCATAAGCGCAGTCATATTGCGCGCTgg > 2:2111393/1‑139 (MQ=255) acaACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGtt < 2:3703235/140‑1 (MQ=255) acaACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGtt < 1:1708909/140‑1 (MQ=255) ccccTCGACAAAAACCCCCGGTGTGAGAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACg > 2:5081221/1‑140 (MQ=255) ccccTCGACAAAAAACCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCGGTTTTGTTATACg < 2:54712/140‑1 (MQ=255) ccTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGtt > 1:3237196/1‑140 (MQ=255) ccTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGtt > 2:4362033/1‑140 (MQ=255) ccTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGtt > 2:1908494/1‑140 (MQ=255) ccTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGtt > 1:4520357/1‑140 (MQ=255) ccTCAACAAAAACCCCCGGTGTGACAATCATTTCTTCAGAAATCTCCCCCATCGGAACGATACGCTCAGCTTCGGCAAAGGTTCTCCTGGCGGCCATTGCCATAAGCGGGTTCATATTGCGCGCGGTTTTGtc > 2:3909531/1‑132 (MQ=255) ccTCAACAAAAACCCCCGGTGTGACAATCATTTCTTCAGAAATCTCCCCCATCGGAACGATACGCTCAGCTTCGGCAAAGGTTCTCCTGGCGGCCATTGCCATAAGCGGGTTCATATTGCGCGCGGTTTTGtc < 1:1315268/133‑2 (MQ=255) cTCGACAAAAACCCCCGGTGTGACATTGTTTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTa < 1:4955488/140‑1 (MQ=255) cTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTa < 1:2156518/140‑1 (MQ=255) cTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTa > 2:1247582/1‑140 (MQ=255) cTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTa < 1:997925/140‑1 (MQ=255) aCAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGAGTCATATTGCGCGCTGTTTTGTTATACGTTAAAtt > 1:4004063/1‑140 (MQ=255) aaaCCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCg > 1:4204659/1‑140 (MQ=255) aCCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGaa > 2:3061551/1‑140 (MQ=255) aCCCCCGGTGTGACAATCAGTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGaa < 2:2483744/140‑1 (MQ=255) ccGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCa > 1:4774052/1‑140 (MQ=255) ccGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCa > 1:3533198/1‑140 (MQ=255) gtgtGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCg < 2:4647727/140‑1 (MQ=255) gtgaGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCg < 2:5138512/140‑1 (MQ=255) aCAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGTTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATAGTGCGCGCTGTATTGTTATACGTTAAATTGACGAATTCATCGGCAAt > 1:5159292/1‑140 (MQ=255) aCAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAAt > 1:3626906/1‑140 (MQ=255) aTTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTgcgc > 2:2215275/1‑140 (MQ=255) tttCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCa < 2:4920813/140‑1 (MQ=255) tttCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCGGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCa < 2:46332/140‑1 (MQ=255) tcGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATtgat > 1:3368290/1‑140 (MQ=255) tcGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATtgat > 1:3077525/1‑140 (MQ=255) cGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATtgatg < 2:1024046/140‑1 (MQ=255) cGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCGGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATtgatg < 2:2518128/140‑1 (MQ=255) cGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGGTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCGGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATtgatg < 2:3447624/140‑1 (MQ=255) tcCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAt < 2:3604774/140‑1 (MQ=255) tcCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAt < 2:2996805/140‑1 (MQ=255) tcCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAt < 1:3923661/140‑1 (MQ=255) tcCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAt < 1:1367759/140‑1 (MQ=255) gcccATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATACGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAt < 2:1629777/139‑1 (MQ=255) cATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAg < 2:4061513/140‑1 (MQ=255) gATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAgcg < 1:3444674/140‑1 (MQ=255) gATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAgcg > 2:3364694/1‑140 (MQ=255) gATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAgcg < 1:2215275/140‑1 (MQ=255) cTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCtt < 2:82595/140‑1 (MQ=255) cTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCtt < 2:4774052/140‑1 (MQ=255) cTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCtt < 2:3533198/140‑1 (MQ=255) cTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCtt < 2:132876/140‑1 (MQ=255) cAGCGTCGGCAAAGGTTCTGCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTGTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCa < 1:5095503/140‑1 (MQ=255) aGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCaa < 1:4419875/140‑1 (MQ=255) aGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCaa < 1:4686912/140‑1 (MQ=255) tctcCTGGCGGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTc < 1:1816690/140‑1 (MQ=255) tctcCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTc < 1:3001759/140‑1 (MQ=255) ctcCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTcc > 2:940946/1‑140 (MQ=255) ctcCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCCAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAAGCAGCCGTCAGCGCCTCTGCAACCAAATACCGCTTTcc > 2:4780291/1‑140 (MQ=255) cTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGc < 1:1019173/140‑1 (MQ=255) gCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTGTCCAGCcac > 2:2954265/1‑140 (MQ=255) cAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCcaca < 1:1935439/140‑1 (MQ=255) cAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCcaca < 1:1802422/140‑1 (MQ=255) cAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCcaca < 1:1337681/140‑1 (MQ=255) cAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCcaca < 1:415263/140‑1 (MQ=255) aGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAg < 1:3891690/140‑1 (MQ=255) ttGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACg < 1:3061551/140‑1 (MQ=255) ttGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACg < 1:3141515/140‑1 (MQ=255) ttGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACg < 1:3529994/140‑1 (MQ=255) aTAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTc < 1:2496570/140‑1 (MQ=255) aaGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCATATACCGCTTTCCAGCCACAGACACGATGTCCt > 1:1626269/1‑140 (MQ=255) aaGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCt > 2:4872905/1‑140 (MQ=255) aaGCGGAGTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATGTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTGTCCAGCCCCAGACACGATGTCCt > 1:579363/1‑140 (MQ=255) cttCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt > 1:1491991/2‑140 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt > 2:543133/1‑140 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt > 1:3311067/1‑140 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt > 1:724397/1‑140 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt < 2:1564789/140‑1 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCt > 2:1835386/1‑140 (MQ=255) aTTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAAGTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGAGGTCCTTTTCCt > 1:3950717/1‑140 (MQ=255) tCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTca < 2:5116102/140‑1 (MQ=255) tCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTca < 2:1644837/140‑1 (MQ=255) tCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTca < 2:1332464/140‑1 (MQ=255) atatTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTcaca < 1:3123760/140‑1 (MQ=255) atatTGCGCGCTGGTTTGTTATACGATAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTcaca < 2:2065832/140‑1 (MQ=255) tatTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACaa > 1:5142471/1‑140 (MQ=255) atTGCGCGCTGTTTTGTTCTACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTcacaga > 1:897598/1‑138 (MQ=255) tGCGCGCTGTTGTGTTATAAGTTAAATTGCCGAATTCATCGTAAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGAAACGATGTCCTTTTCCTCACAAAcc < 1:4264147/140‑1 (MQ=255) cgcgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt > 1:1741396/1‑140 (MQ=255) cgcgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt > 1:1523489/1‑140 (MQ=255) cgcgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt > 2:4679559/1‑140 (MQ=255) cgcgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACAAAATACCGCTTTCAAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt > 1:1037317/1‑140 (MQ=255) cgagatGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt < 2:3379913/135‑1 (MQ=255) gcgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCTCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAtt > 2:3219675/1‑140 (MQ=255) cgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAg > 1:1859215/1‑68 (MQ=255) cgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAttt > 2:3205185/1‑140 (MQ=255) cgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCAt > 1:3737730/1‑138 (MQ=255) cgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGAGGTCCTTTTACTCACAAACCAatt > 1:2115215/1‑140 (MQ=255) cgcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTCATGAAAGCAAATTCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTACAGCCACAGACACGATGTCCTTTTCCTCACACACCAttt > 1:2754110/1‑140 (MQ=255) gcTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCATTTg < 1:3908186/140‑1 (MQ=255) cTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCATTTGa > 1:1963349/1‑140 (MQ=255) tGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCATTTGAt > 2:1871516/1‑140 (MQ=255) | CGCTTCTCACAACCCCCTCGACAAAAACCCCCGGTGTGACAATCATTTCTTCGGAAATCTCTCCCATCGGGACGATCCGCTCAGCTTCGGCAAAGGTTCTCCTGGCAGCCATTGCCATAAGCGGATTCATATTGCGCGCTGTTTTGTTATACGTTAAATTGCCGAATTCATCGGCAATTTGCGCATTGATGAAAGCAAAATCAGCCGTCAGCGCCTCTTCAACCAAATACCGCTTTCCAGCCACAGACACGATGTCCTTTTCCTCACAAACCATTTGAT > NZ_CP034943/2147369‑2147647 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |