| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,491,058 | T→G | 6.2% | E271D (GAA→GAC) | floA ← | flotillin‑like protein FloA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,491,058 | 0 | T | G | 6.2% | 679.3 / 7.0 | 271 | E271D (GAA→GAC) | floA | flotillin‑like protein FloA |
| Reads supporting (aligned to +/- strand): ref base T (164/79); new base G (3/25); total (167/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.82e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 272 total aligned reads displayed.
CGAATGAATCACGCATTTCTGTGTCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGTTTTTGCCAATGT > NZ_CP034943/2490919‑2491194 | cACGCATTTCTGTGTCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTGACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTAcg < 2:828752/140‑1 (MQ=255) ttCTGTGTCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGgcgc > 1:1528714/1‑140 (MQ=255) cTGTGTCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGgcgcgc < 2:1995291/140‑1 (MQ=255) tgtCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCagt > 1:3445585/1‑138 (MQ=255) tgtCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCAtt > 1:4446816/1‑140 (MQ=255) gtCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGAGCGCATTTCCTCTACGCGGGCGCGCAgtt > 2:3062771/1‑140 (MQ=255) tCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCGGCCCGCACAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTCCGCGGGCGCGCATTTc < 2:2733200/140‑1 (MQ=255) cAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTcc < 2:4234091/140‑1 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCACGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 1:2795739/1‑140 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 2:3421685/1‑140 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 2:1754675/1‑140 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 2:4142189/1‑140 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 2:5181357/1‑140 (MQ=255) gCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTg > 1:2837244/1‑140 (MQ=255) cTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTc < 2:1106841/126‑1 (MQ=255) cTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGa < 1:3959059/140‑1 (MQ=255) cTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGa > 1:4777848/1‑140 (MQ=255) cTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGa > 1:1243115/1‑140 (MQ=255) ttGTTATTCATGTAGTCCATGACGGCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCGGCTTCGGCTTCTACAACTTTCGCGCGCATTACGTCTACGCGGGCGCGCATTTCCTCTTCATGAGCGAc > 2:2622325/1‑140 (MQ=255) ttGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGAc < 1:2207222/140‑1 (MQ=255) ttGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCAGTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGAc < 1:3979516/140‑1 (MQ=255) gATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAg > 2:3972813/1‑140 (MQ=255) gATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAg > 1:4277030/1‑140 (MQ=255) atatTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGc < 1:4567395/140‑1 (MQ=255) atatTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGc < 1:4146758/140‑1 (MQ=255) tCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGACATc > 1:4485629/1‑140 (MQ=255) tCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCAGTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATc > 1:143902/1‑140 (MQ=255) tGTAGTCCATGCCGCCAAGAGTCCCTTCCCGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGATTCTACCACTATCGCGCGCCTGTCCTCTACGCGGGCGCGCATGTCCTGTTCATGAGCGACAGCCATCGCa < 1:3401699/140‑1 (MQ=255) tGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTc > 1:526346/1‑115 (MQ=255) gTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCAcgtc > 2:1533817/1‑140 (MQ=255) tCCATGACGCCACTATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCGTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCAcgtcg > 1:5129602/1‑140 (MQ=255) ccATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCCCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCAcgtcgt > 1:3721342/1‑140 (MQ=255) cATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAATCGGCACTTCCGCTTCGGCGTCTAGCACTTTAGCGCGGCTTTCCTCTACTCGGGCGCGCATTTCGTGGTCGTGAGCGACGGCCATCGCAcgtcgtg > 2:1656749/1‑139 (MQ=255) cATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGtt > 2:1608791/1‑140 (MQ=255) cATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGtt > 1:4463480/1‑140 (MQ=255) aTGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTc > 1:1579657/1‑107 (MQ=255) gACGCCAATCTTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGTCTTCTACCACTTTCGCGCGCATGTCCTCGACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGttctt < 1:3760064/140‑1 (MQ=255) gACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGttctt < 1:779367/140‑1 (MQ=255) gACGCCAATAGTCCCGTCACGCACAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTGGAGCGACAGCCATCGCACGTCGttctt < 2:2799556/140‑1 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCTATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 2:3865674/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 1:1665608/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 1:1783375/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 2:1478853/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 2:3404993/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 1:3850626/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 1:3645158/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 1:5043739/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACATTCGCGCGCATTTCCTCTACGCGGGCGCGCAATTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 2:2161334/1‑140 (MQ=255) cAATATTCCCTTCACGCAAAGCGTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCt > 2:2965064/1‑140 (MQ=255) ccTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTg > 1:9948/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCCTTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 1:2435581/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 1:389013/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 2:613786/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 2:650956/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 2:4786345/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTgcg > 2:3622101/1‑140 (MQ=255) ttCACGCAAAGCTTCTGCCATAGCAAGCGGCACTTCCGCTACGGCTTCTACCAATTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGATCTTCCGCGTGTGCCTgcg > 2:5116094/1‑140 (MQ=255) cACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCCCTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGcgcg < 2:4091949/140‑1 (MQ=255) cACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGcgcg < 1:2355437/140‑1 (MQ=255) cACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGcgcg > 1:4962509/1‑140 (MQ=255) cACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGcgcg < 2:1140422/140‑1 (MQ=255) cACGCAAAGCTTCTGCCATCGCAAGCGGCACTTACGCTTAGGCTTCTACCACTTTCGCGCGCTTTTCCTCGACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGcgcg < 1:110507/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:653961/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:578020/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 2:4463480/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:3614743/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:3243751/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:1203465/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCAGTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 1:1850958/140‑1 (MQ=255) ttCTGCCATCGCAAGCGGCACTTCCGCTTCGGCGTCTACCACTTGCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGGCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTAt < 2:2836814/140‑1 (MQ=255) ttCTGACATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATTTTTTTAt < 2:2060810/140‑1 (MQ=255) cTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCa > 1:4006713/1‑140 (MQ=255) tGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAg > 2:1813999/1‑140 (MQ=255) tGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTGTTGCCTGCGCGATGTGTTTATCAg > 2:2457879/1‑140 (MQ=255) ccATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCCCTTTCGCGCGCAGTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGcc < 2:2015725/140‑1 (MQ=255) ccATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGcc < 2:4006713/140‑1 (MQ=255) ccATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGcc < 2:4159559/140‑1 (MQ=255) ccATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGcc < 1:4976893/140‑1 (MQ=255) cGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCttt > 2:900240/1‑111 (MQ=255) cGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCgg > 2:1878427/1‑140 (MQ=255) cGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCgg > 2:4940197/1‑140 (MQ=255) aGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTg > 1:1031212/1‑140 (MQ=255) cGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGt > 1:2009666/1‑119 (MQ=255) gCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCg < 1:1754675/140‑1 (MQ=255) acgtCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGt < 2:3171939/137‑1 (MQ=255) aCTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTTTCAGCCTCGGCCTGATCGGt > 2:2222536/1‑140 (MQ=255) cGCTACGGCTACTACCAATTTCGCGCGCATTTCCTCTACGCGGGCGCTCATTTCCTGTTCTTGAGCTACAGCCATCGCACGTCGTTCTTCCCCATTTGCCTGCGCGATGTTTTTATCAGCCTCCGCCTGATCGGATTGTa > 2:3462235/1‑140 (MQ=255) ttCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTaaaa < 1:4109023/140‑1 (MQ=255) cGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATc > 1:3066011/1‑140 (MQ=255) gCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGc > 1:4378818/1‑140 (MQ=255) gCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGc > 2:4360834/1‑140 (MQ=255) gCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGc > 2:2925606/1‑140 (MQ=255) gCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGc > 2:3291437/1‑140 (MQ=255) cTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCg < 1:613786/140‑1 (MQ=255) cTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCg > 1:1041869/1‑140 (MQ=255) cTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGttt > 2:1389945/1‑140 (MQ=255) cTTTCGCGCGCAGGTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGttt < 1:2925606/140‑1 (MQ=255) tttCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGtttt > 1:5142617/1‑140 (MQ=255) tCGCGCGCATGTCCTCTCCGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGTTTTTg < 1:3421685/140‑1 (MQ=255) cATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTGTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGTTTTTGCCAATGt < 2:5043739/140‑1 (MQ=255) | CGAATGAATCACGCATTTCTGTGTCAGCATCAATGTTCTTGATATTCATGTAGTCCATGACGCCAATATTCCCTTCACGCAAAGCTTCTGCCATCGCAAGCGGCACTTCCGCTTCGGCTTCTACCACTTTCGCGCGCATTTCCTCTACGCGGGCGCGCATTTCCTGTTCTTGAGCGACAGCCATCGCACGTCGTTCTTCCGCTTTTGCCTGCGCGATGTTTTTATCAGCCTCGGCCTGATCGGTTTGTAAAATCGCTCCGATGTTTTTGCCAATGT > NZ_CP034943/2490919‑2491194 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |