| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,627,197 | G→T | 6.1% | intergenic (‑18/‑115) | EO946_RS13595 ← / → EO946_RS13600 | YrzK family protein/SH3 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,627,197 | 0 | G | T | 6.1% | 727.9 / 12.0 | 256 | intergenic (‑18/‑115) | EO946_RS13595/EO946_RS13600 | YrzK family protein/SH3 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base G (78/156); new base T (20/2); total (98/158) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.32e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 256 total aligned reads displayed.
GACCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGAAATACTTTGTTC > NZ_CP034943/2627059‑2627333 | gACCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGa < 2:969175/140‑1 (MQ=255) aCCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAt < 2:4440045/140‑1 (MQ=255) aCCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAt < 2:4128746/140‑1 (MQ=255) aCCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAt < 2:2508082/140‑1 (MQ=255) ccAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAtt < 2:3434020/140‑1 (MQ=255) ccAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAtt < 2:2622062/140‑1 (MQ=255) cAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTg < 2:3500648/140‑1 (MQ=255) cAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTg < 1:699262/140‑1 (MQ=255) cAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTg < 1:2613765/140‑1 (MQ=255) aaTTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGTTATTTCATGATTTGCTCACCGTTTTGATTGTa > 1:4875120/1‑140 (MQ=255) aaTTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCAACGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTa > 2:1947802/1‑140 (MQ=255) aTTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTTCTTAAACGTGGTGAAATGCACGTCCCAATTTTTGATGATATTTAATGATTTTCAAAACGTTTTGATTTTAt > 1:3476756/1‑140 (MQ=255) ttCAGATGCTGTTTCAGTAAGAGAACCGGTCGTTTCGGGAGCTGCGTGATCGCTGTAATGCAGATTTGCTTCCCCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTAtt < 1:4269210/140‑1 (MQ=255) ttCAGATGATGGTTCAGTAAGATAACCGGTCGTTTCGGTATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTAGTGAAAGGAACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTAtt < 1:481937/140‑1 (MQ=255) ttGCTGTTTCAGTAAGATAACCGGTAGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 2:2100985/139‑1 (MQ=255) ctGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 1:3970231/139‑1 (MQ=255) ctGCTGTGTCAGTAAGATAACCGGTCGTGTCGGGATCGGCGTGATCGCTGTACTGCAGATTTGCGTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 1:3324823/139‑1 (MQ=255) aggCTGTTTCAGGAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 2:4362436/138‑1 (MQ=255) aTGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 1:1069928/140‑1 (MQ=255) aTGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc < 2:2608787/140‑1 (MQ=255) tGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGcc < 2:1045005/140‑1 (MQ=255) tGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGACATTTCATGATTTGCACACCTTTTTGATTGTATTTATGcc < 1:1524949/140‑1 (MQ=255) tGCTGTTTCAGGAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGcc < 1:1414661/140‑1 (MQ=255) tGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGTAATGCACGTGCCATTTTTGGATGATATTTCATGATTTGCAACCCTTTTTGAATGTATTTATGCCTAg > 2:2074767/1‑140 (MQ=255) gTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGt > 2:3588831/1‑140 (MQ=255) gTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGt > 2:4326539/1‑140 (MQ=255) gTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCCTCGTGAAATGCACGTCCCATTTTTGGATTATATTTCATGATTTTCAAACCTTTTTTATTGTATTTATGCCTAGt > 2:632420/1‑140 (MQ=255) gTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATAGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCAAACCTTTTTGATTGTATTTATGCCTAGt > 2:2826210/1‑140 (MQ=255) gTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATAGCTGTAAAGCAGATTTGCTTCACCGTCGTGAAATTCACGTACCATAATTGGATCAAATTTCAACATTTGCACACCGTTTTGATTATATTTATGACAAGt > 2:4497073/1‑140 (MQ=255) tttCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATTAAGATTTTCTTCACCGTCGTTAAATGCACGTCCCATTTTTTGATGATATTTAATGATTTTAAAAACTTTTTGATTGTATTTATGCCTATta > 2:4219948/1‑140 (MQ=255) tttCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTTATTGTATTTATGCCTAGta > 2:3325455/1‑140 (MQ=255) tttCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGta > 2:2698310/1‑140 (MQ=255) tttCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACAGTCGTGAAATGCACGTCCCATTTTTTGATGATATTTCATGATTTGCACACATTTTTTATTGTATTTATGCCTAGta > 2:2998180/1‑140 (MQ=255) aGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCAACGTCGTGAAATTCAAGTCCCATTTTTGGATGATATTTCATGATTTGCACACCATTTTTATTTTATTTATTCCTAGTATAAACaaa > 1:4056210/1‑140 (MQ=255) gATAACCGGTCGTTTCGGGCTCTGCGTGATCGCTGTAATGCAGATTTGCGTCACCGTCGTGAAATTCACGTGCCATTTTTTGATGATATTTAAAGATTTGCCCACCATTTTGATTGTATTTATTCCTAGTATAAACaaaa > 1:3379701/1‑139 (MQ=255) gATAACCGGTCGTTTCGGGATCTGCGTGATAGCTTTAATTCAGATTTTCTTAAACGTCGTTAAAAGCACCTCCCAATTTTGGATGATATTTAATTATTTTGACACCTTTTTTTTTTTATTTATTCCTAGTAaaaaaaaaa > 1:3687381/1‑139 (MQ=255) aTAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATc > 2:1101462/1‑140 (MQ=255) aTAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATAATTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATc > 1:3420643/1‑140 (MQ=255) aTAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAAAGCAGATTTGCTTCACCCTCGTGAAATGCACGTCCCCTTTTTGGATGATAATTCATGATTTGCACACCTTTTTGATTGTATTTTTTCCTAGTATAAACAAATc > 2:1295610/1‑140 (MQ=255) aTAACCGGTCGTTTCGGGATCTGCGTGATAGCTGTAATGCAGATTTGCTTAACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGGACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATc > 1:4381481/1‑140 (MQ=255) ccGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTTCTTCACCGTCGTGAAATGCACCTCCCAATTTTGGATGATATTTAATGATTTTCACACCATTTTTATTTTATTTATGCCTAGTATAAAAAAATCattt > 1:4082295/1‑140 (MQ=255) ccGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGc > 2:4082223/1‑120 (MQ=255) ccGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCCTCGTGAAATTCACGTCCCATTTTTTGGTGATATTTAATGATTTGCACACCTTTTTTATTTTATTTATTCCTAGTATAAACAAATCattt > 1:4570909/1‑140 (MQ=255) ccGGTCGTTTCGGGATCTGCGTGATAGCTGTAAAGCAGAATTGCTTCACCCTCGTGAAAATCACCTCCCATTTTTTGATGATATTTAATTATTTTCAAAACATTTTTATTTTATTTATTACTAGTATAAAAAAAtaaatt > 1:4138077/1‑135 (MQ=255) gTTTCGGGATCTGCGTGATCGCTGTAATGCCCATTTTCTTAACCGTCGTGAAATTCACGTCCCATTTTTGGATGATATTTAAAGATTTTCAAACCTTTTTTATTGTATTTTTGGCTAGTATAAAAAAATAattttatttt > 1:2897834/1‑140 (MQ=255) cTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTaaaaa < 2:2411551/140‑1 (MQ=255) cTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTaaaaa < 2:670376/140‑1 (MQ=255) tGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAAt > 1:3648156/1‑140 (MQ=255) tGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGa < 2:3476756/140‑1 (MQ=255) aTCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGaaa > 1:4727249/1‑140 (MQ=255) aTCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGaaa > 1:4409411/1‑140 (MQ=255) gTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGcc > 2:4859972/1‑92 (MQ=255) gTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACtt > 1:1523672/1‑140 (MQ=255) gTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACtt > 1:946034/1‑140 (MQ=255) gTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACtt > 1:2713127/1‑140 (MQ=255) aaTGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTa < 1:825646/140‑1 (MQ=255) aaTGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTa < 1:613301/140‑1 (MQ=255) tGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACg < 1:3119397/140‑1 (MQ=255) aTTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGAt > 1:2325115/1‑71 (MQ=255) aTTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAATTGATTTTATTTTTATTTATAAATCAGAAAGGCCTTTACGataat > 2:2931643/1‑140 (MQ=255) aTTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGataat > 1:3772560/1‑140 (MQ=255) ttGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGAtaataa > 1:2737693/1‑140 (MQ=255) ttGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATAAGAAAGGACTTTAGGAtaataa > 1:2906179/1‑140 (MQ=255) ttGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATAAGAAAGGACTTTACGAtaataa > 2:1195336/1‑140 (MQ=255) tGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAg < 1:3299880/140‑1 (MQ=255) tCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATAAGAAAGGACTTTACTATAATAATCAAg > 2:4585266/1‑140 (MQ=255) gtGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACGTTACGATAATAAGCAAGAATTCttt > 2:874486/1‑140 (MQ=255) aaTGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTa < 2:3379701/140‑1 (MQ=255) aaTGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTa < 2:3687381/140‑1 (MQ=255) aaTGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTa < 1:1005377/140‑1 (MQ=255) aTGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTaa > 1:1747470/1‑140 (MQ=255) cACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGa > 1:112613/1‑140 (MQ=255) aCGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGat < 1:4527039/140‑1 (MQ=255) aCGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGat < 1:2181611/140‑1 (MQ=255) aCGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGat < 1:1725195/140‑1 (MQ=255) aCGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGat < 1:242411/140‑1 (MQ=255) gTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAATCAAGAATGCTTTTTTAATGatca > 1:688417/1‑140 (MQ=255) caaTTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGAtcatca < 2:3882970/138‑1 (MQ=255) aTTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGa < 1:1986827/140‑1 (MQ=255) aTTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGa > 2:4984126/1‑140 (MQ=255) ttttGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGaaa < 2:1392756/140‑1 (MQ=255) ttttGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGaaa < 2:2322409/140‑1 (MQ=255) ttGGATGATATTTCATGATTTTCACACCTTTTTTATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATCAGCAAGAATGCTTTTTTAATGATCATCAGAAagg < 1:5122760/140‑1 (MQ=255) ttGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAagg < 2:177922/140‑1 (MQ=255) gatgatATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGGACGAATGCTTTTTTAATGATCATCAGACaggagg > 2:3957762/1‑140 (MQ=255) tCATGATTTTCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGa < 1:2696296/140‑1 (MQ=255) tCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGa < 1:987570/140‑1 (MQ=255) tCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGa < 2:1519260/140‑1 (MQ=255) tCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGa < 1:4326539/140‑1 (MQ=255) cATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATACACAAATCATTTTATTATTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATTAg < 1:3539691/140‑1 (MQ=255) aTGATTTGCACAGCTTTTTGATTGTATTTATGCCTATTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGc < 2:221873/140‑1 (MQ=255) aTGATTTGCACACCTTTTTGATTTTTTTTATGCCTATTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGc < 1:2076710/140‑1 (MQ=255) aTGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGc < 2:856609/140‑1 (MQ=255) aTGATTTGCAAACCTTTTTGATTGTATTTATGCCTATTATACACAAATCATTTTATTTTTATTTAAAAATAAGAAAGGACTTTAGGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGc < 1:4224172/140‑1 (MQ=255) ttccacaCCTTTTTGATTTTATTTATTCCTAGTATAAACAAATCATTTTAATTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGaa < 1:3111950/137‑1 (MQ=255) ttGCACACGTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGaa < 2:1619556/140‑1 (MQ=255) ttGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGaa < 2:3113745/140‑1 (MQ=255) acatttttGATTTTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGAAATACtt < 2:1846923/137‑1 (MQ=255) acCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGAAATACtt < 2:3772560/140‑1 (MQ=255) cTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGAAATACTTTg > 1:2560566/1‑140 (MQ=255) | GACCAAATTCAGATGCTGTTTCAGTAAGATAACCGGTCGTTTCGGGATCTGCGTGATCGCTGTAATGCAGATTTGCTTCACCGTCGTGAAATGCACGTCCCATTTTTGGATGATATTTCATGATTTGCACACCTTTTTGATTGTATTTATGCCTAGTATAAACAAATCATTTTATTTTTATTTAAAAATCAGAAAGGACTTTACGATAATAAGCAAGAATGCTTTTTTAATGATCATCAGAAAGGAGGACACAATGAGCAAGAAATACTTTGTTC > NZ_CP034943/2627059‑2627333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |