| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,632,871 | A→G | 5.4% | M575T (ATG→ACG) | recJ ← | single‑stranded‑DNA‑specific exonuclease RecJ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,632,871 | 0 | A | G | 5.4% | 740.9 / 21.2 | 221 | M575T (ATG→ACG) | recJ | single‑stranded‑DNA‑specific exonuclease RecJ |
| Reads supporting (aligned to +/- strand): ref base A (113/95); new base G (6/6); total (120/101) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.49e-01 | |||||||||||
Only 100 of 235 total aligned reads displayed.
CGCCTTCGCTTGATCTTCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAACCCGGGACAATGC > NZ_CP034943/2632732‑2633009 | ttCGCTTGATCTTCAGAGCTGATTACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAATAAGTGTTGTTGAGTCTTCTTTGAAATAGACAATGGCCCGTTTAGAATATGGAACGACGGAAACTGTGTCTTCCCACATcag > 2:4586465/1‑138 (MQ=255) ttCGCTTGATCTTCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCg > 1:3996682/1‑140 (MQ=255) ttCGCTTGATCTTCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCg > 2:1477857/1‑140 (MQ=255) aTCTTCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCcaca < 2:3730790/128‑1 (MQ=255) ttCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTa < 1:192000/140‑1 (MQ=255) atgaCGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAg > 2:1574094/1‑140 (MQ=255) cGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGc < 2:6001/140‑1 (MQ=255) cGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGc < 2:530387/140‑1 (MQ=255) cGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGc < 2:4930958/140‑1 (MQ=255) gTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGcc > 2:2537116/1‑140 (MQ=255) gTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGcc > 1:5063142/1‑140 (MQ=255) gCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCAt > 2:840214/1‑140 (MQ=255) cACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCAtt < 2:5167393/140‑1 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCCTTCAGaa > 1:3200623/1‑140 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGaa > 1:2592757/1‑140 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGaa > 1:4616908/1‑140 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGaa > 2:2144970/1‑140 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTCAAATCAAACAGCTGCCATTCAGaa < 2:337731/140‑1 (MQ=255) cACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTATCCCCTTAAATCAAACAGCTGCCATTCAGaa > 1:545802/1‑140 (MQ=255) aCGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGaaa < 1:4460118/140‑1 (MQ=255) cGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAAc > 2:3106026/1‑140 (MQ=255) cGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAAc > 2:3521846/1‑140 (MQ=255) aaGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGTACGGACGGAAACTTTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGAGATTCAGAAACAGCgg < 1:1880390/140‑1 (MQ=255) aaGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCgg < 1:3140667/140‑1 (MQ=255) aaGGTATTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCgg < 1:3879212/140‑1 (MQ=255) aGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGc > 1:439868/1‑140 (MQ=255) aGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGc < 2:4082099/140‑1 (MQ=255) aGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGc > 1:2680281/1‑140 (MQ=255) gTCTTCAGTTTGAAGTAATGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGGCGGAAACTGTGTCTTCCCACGTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCAt > 1:878189/1‑140 (MQ=255) gTCTTCAGTTTGAAGTAATGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGGCGGAAACTGTGTCTTCCCACGTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCAt > 1:1281046/1‑140 (MQ=255) gTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCAt < 1:4177693/140‑1 (MQ=255) ttCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCt < 2:3218338/140‑1 (MQ=255) ttCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCt < 2:293362/140‑1 (MQ=255) cAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTa > 2:3593730/1‑140 (MQ=255) cAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTa > 1:3307247/1‑140 (MQ=255) tGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCAt > 1:913857/1‑140 (MQ=255) tGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCAt > 2:1229446/1‑140 (MQ=255) aagaagTGTTGTTGAGACTTCTTAGAAAGAGACAATGGCCAGTTTAGCAGATGGAAGGACGGAAACAGAGTCTTCCCACAACCGTTATCCCCTTAAATCAAACAGCAGCCATTCAGAAACAGCGGCATAATTAATCaaaa > 2:1297924/1‑137 (MQ=255) tgttgtTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGCCGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCGTCATCATTCGCTGCg > 1:491858/1‑140 (MQ=255) tgttgtTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTgag > 1:2849537/1‑138 (MQ=255) tgttgtTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCg > 1:1043016/1‑140 (MQ=255) tgttgtTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTGAATCATTAGCTGCg > 2:3904601/1‑140 (MQ=255) ttgttgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGt > 1:1571573/1‑140 (MQ=255) gttgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttt > 1:367519/1‑140 (MQ=255) gttgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttt > 2:3415634/1‑140 (MQ=255) gttgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttt > 2:1927402/1‑140 (MQ=255) tgtgTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttttt < 1:4508340/137‑1 (MQ=255) tgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttttt < 1:4197966/140‑1 (MQ=255) tgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttttt < 1:3830996/140‑1 (MQ=255) tgAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttttt < 1:4755278/140‑1 (MQ=255) tgAGTCTTCTTTGAAAGAGACAATGGCCCCTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGttttt < 1:5074689/140‑1 (MQ=255) tcttctTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCg < 2:4681942/108‑1 (MQ=255) cttcttTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTa < 2:882726/140‑1 (MQ=255) cttcttTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTa < 1:681530/140‑1 (MQ=255) ttcttTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTAt > 1:2002013/1‑140 (MQ=255) aaaGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCa < 1:1153872/140‑1 (MQ=255) aaaGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCa < 2:3704711/140‑1 (MQ=255) aaGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCAt < 1:3593730/140‑1 (MQ=255) agaCAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCg > 2:2735436/1‑140 (MQ=255) gaCAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGt < 2:3309468/140‑1 (MQ=255) gaCAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGt < 2:2260500/140‑1 (MQ=255) aCAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGc > 1:3370390/1‑95 (MQ=255) aaTGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGa > 2:712807/1‑140 (MQ=255) aTGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGAt < 1:3471821/140‑1 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGACACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCCATTGTTCCATTCGTTGaga > 1:264290/1‑138 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACCTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCAGCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa > 1:3547245/1‑140 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAACTCACACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTGTTTTTCTAGTGTTCCATTCGTTGAtg > 1:306570/1‑139 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa < 2:2691615/140‑1 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa < 2:4830558/140‑1 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa > 1:275561/1‑140 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa > 1:429776/1‑140 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa > 2:4369578/1‑140 (MQ=255) tGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATa > 1:3432811/1‑140 (MQ=255) cGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCAt > 1:175151/1‑126 (MQ=255) cGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCAt < 2:175151/126‑1 (MQ=255) gTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACAACCGTTTTCCCATTAAATCAAACAGCTCCCATTCAGACACAGCGGCATCCATAATCATTAGATGCGGTTTTTTTCTATTGTTCCAATCGAGGATATACAta > 2:3914638/1‑139 (MQ=255) aTGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCgg > 2:2745192/1‑75 (MQ=255) ggAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAAt > 2:2457543/1‑140 (MQ=255) ggAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAAt > 1:621805/1‑140 (MQ=255) ggAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTACATTCGTTGATAGACATCTCACCGACAAt > 1:4823116/1‑140 (MQ=255) aGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGa < 2:4780304/140‑1 (MQ=255) aGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTAAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGa < 2:1355722/140‑1 (MQ=255) ggAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTc > 1:1795778/1‑140 (MQ=255) ggAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTc > 2:1832019/1‑140 (MQ=255) aaaCTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCtt < 2:1889542/140‑1 (MQ=255) aaaCTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCtt < 2:1644867/140‑1 (MQ=255) gtgtCTTCCCACGTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTTATCATAAGCTGCGGCTTTTTTCGATTGTTCCATTCGTTGATTGACATCTCACCGACAATGGAAATTCTTGAAcc < 2:2639222/140‑1 (MQ=255) gtgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGTTAGACATCTCACCGACAATTGAAATTCTTGAAcc > 1:1422208/1‑140 (MQ=255) gtgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAAcc < 1:2735633/140‑1 (MQ=255) gtgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAAcc < 1:840214/140‑1 (MQ=255) gtgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAAcc > 1:3320865/1‑140 (MQ=255) gtgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATATCACCGACAATTGAAATTCTTTAAcc > 1:4088782/1‑140 (MQ=255) tgtCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAAccc > 2:3129477/1‑140 (MQ=255) cccACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAACCCGGGACa < 2:1043016/140‑1 (MQ=255) cacaTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAAt < 2:4502923/116‑1 (MQ=255) caTCCGTTTTCCCCTTAAATCACACAGCTGCCATTCAGACACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATATCACCGACAATTGAAATTCTTGAACCCGGGACAATGc > 2:3182090/1‑140 (MQ=255) caTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGaa < 1:2348708/118‑1 (MQ=255) caTCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGaa > 2:2348708/1‑118 (MQ=255) caTCCGTTTTCCCCTTAAATCAAAAAGCTGCCATTCAGAAACAGCGGCATCATTAATAATTAGCTGCGGTTTTTTTCTATTGTTACAATCGTTGATAGACATCTCACCGACAAATCAAATTCTTGAAACCGCGACACTGc > 2:5107545/1‑140 (MQ=255) caTCCGTGTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAACCCGGGACAATGc > 1:1634013/1‑140 (MQ=255) | CGCCTTCGCTTGATCTTCAGAGCTGATGACGTGCACTTCACGGCGAAGGTCTTCAGTCTGAAGAAGTGTTGTTGAGTCTTCTTTGAAAGAGACAATGGCCCGTTTAGCAGATGGAAGGACGGAAACTGTGTCTTCCCACATCCGTTTTCCCCTTAAATCAAACAGCTGCCATTCAGAAACAGCGGCATCCTTAATCATTAGCTGCGGTTTTTTTCTATTGTTCCATTCGTTGATAGACATCTCACCGACAATTGAAATTCTTGAACCCGGGACAATGC > NZ_CP034943/2632732‑2633009 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |