| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,812,782 | T→G | 7.1% | K202T (AAG→ACG) | EO946_RS14520 ← | SDR family oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,812,782 | 0 | T | G | 7.1% | 508.1 / 3.0 | 249 | K202T (AAG→ACG) | EO946_RS14520 | SDR family oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base T (107/107); new base G (29/2); total (140/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.31e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 250 total aligned reads displayed.
CATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGCC > NZ_CP034943/2812645‑2812921 | tGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTg < 1:5110132/140‑1 (MQ=255) tGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTg < 1:1865324/140‑1 (MQ=255) tGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGGTGTCCTCACACAAGACAGCGCTAATCCGGGCGATATCCTCCCCTGTGCCAGAACTTCCTAACGGCGTTTTTTCCTTGCCGATTCGCTTCCTg < 1:2758044/140‑1 (MQ=255) agaCCTCCGGTGGCTTCACTGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:1572524/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:4745963/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:3243398/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 1:775828/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 1:2077820/140‑1 (MQ=255) agaCCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc < 2:3698358/140‑1 (MQ=255) ccTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATCATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTc < 2:3354876/140‑1 (MQ=255) tCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCct < 1:1100677/140‑1 (MQ=255) tCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCct > 1:3861182/1‑140 (MQ=255) tCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCct > 2:557954/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTTCCGATTCGCTTACTGGGTTCctc > 1:258601/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCctc > 1:3694208/1‑140 (MQ=255) ccGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCGTTCCGATTCGCGTCCTGGGGTCctg > 1:3944360/1‑139 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATg < 2:2483085/140‑1 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATg < 2:3426533/140‑1 (MQ=255) ttCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATg < 2:4426898/140‑1 (MQ=255) tCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCAATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGc < 2:4373468/140‑1 (MQ=255) aaTGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGctt > 2:4628567/1‑140 (MQ=255) aaTGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCGTGCCGATTCGCATACTGGCGTCCTCTATTGATGgtt > 2:1389425/1‑140 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGCGTGCGCTAGTGATGGTTCCTTAAt > 1:4017532/1‑140 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCAt > 2:2267608/1‑140 (MQ=255) gTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCAt > 2:399866/1‑140 (MQ=255) gCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATTCTCCGGGCGATATCCTCGGCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGt < 2:3746730/140‑1 (MQ=255) gCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGt < 2:1190885/140‑1 (MQ=255) ccTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCGTGCCGATTCGCTTACTGGCTTCCTCTATTGATGCTTCCTTCATGTc > 2:2857900/1‑140 (MQ=255) tCACAAGGTCTGAGTTCTCCTCAGACACGTAAGCGATATTCGGGGCGATATCCTGGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCCTGTCGCCg < 2:4902348/140‑1 (MQ=255) tCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCg < 2:730822/140‑1 (MQ=255) tCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCg < 2:4538690/140‑1 (MQ=255) aaGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACaa > 2:2102098/1‑140 (MQ=255) ggTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCCCTTCGCTTCCTGGCGTCCGCGGCTGATGCGTCCTTCATGTCGCCGACaaag > 2:900004/1‑138 (MQ=255) ggTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTTCTTGCCGATTCGCTTACTGGCGTCCGCTATTGTTGCTTCCGTCATGTAGCCGACaaag > 1:2408019/1‑138 (MQ=255) gTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGt < 2:2276051/140‑1 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCAc > 2:3542945/1‑140 (MQ=255) tGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGGGTGCTCTCTTGATGGTTGCTTCATTTCGCCGACAATGTCAc > 1:296898/1‑140 (MQ=255) ttCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCgg < 1:4726347/140‑1 (MQ=255) ttCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCgg < 1:2774200/140‑1 (MQ=255) ttCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCgg < 2:2561893/140‑1 (MQ=255) ctcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAAt < 2:3881388/129‑1 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCAGGCTTCCTCGAGTGATTCGTACTGAAAGTCGCCGACAATGTGACCCCGGcc > 1:4433308/1‑139 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCCATTCGCTTGCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCCCCCGGGcc > 2:1748880/1‑139 (MQ=255) tcctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTTCCGATTCGCGTCCTGGCTTCCTCTAATGATGCTTCCATCATTTCGCCGCCAAAGTCACCCCGGCa > 1:1694435/1‑140 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGc > 1:3189692/1‑91 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCGTCCTTCATTTCGCCGACAAAGTCACCCGGGcca > 1:1214717/1‑138 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTCCTGGCTTCCGCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGcca > 2:624334/1‑138 (MQ=255) cctcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCATGCCGCTTGGGATGCAGGCTGACGCGATTGATGGTTACTTAAATTAGGCGACAAAGTAACCCGGGcca > 1:1787089/1‑138 (MQ=255) tcAGACAATAAAGATATTATACGGGCGATATCCTCGACTGTGCCAGATCTTCCTATCGGCGTTTTGTCCTTGCCTTTTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAc < 1:5031665/140‑1 (MQ=255) tcACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAAc < 2:2354735/140‑1 (MQ=255) acaAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGCTTCGCTTCCTGGCTTCCTCTATTGATGCGTCCTTCATTTAGCCGACAATGTCACCCGGGCCAACCCTg > 2:3869059/1‑140 (MQ=255) aGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCGTGCTGGCTTGCTCGATTTATGCGTGCGTGATGTGGCCGACCATGTCACCCGGGCCAACCagggtg > 1:2242420/1‑135 (MQ=255) aGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTg > 2:4210795/1‑140 (MQ=255) gtaaGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGATTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTgg < 2:458669/138‑1 (MQ=255) aaaGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACTTGCCGATTCGCGTCCTGGCGTCCTCTATTGATTCTTCCGTCATGTCGCCGACAAAGTCACCCGGGCAAACCAAGTTTGc > 1:2422148/1‑140 (MQ=255) aGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTGGCGTCCTGGGGTGCTCTATTGATGCTTCCGTCATGTCGCCGACAAAGTCACCCGGGCAAACCAGGTTGGccg > 2:792070/1‑138 (MQ=255) aGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGGTTCCTTCATTTCGCCGACAATGTCAACCGGGCAAAACATGTTGGCAg > 2:5031665/1‑140 (MQ=255) gCGATAATCCGGGCGATAGCCTAGCCTGTGACAGATCTTACTATCGGCGTTTTTTCCTAGCCCATTAGCGTCCTGGCTTCCTCTGATGTTGCTTCCATCAATTAGCAGACCATGTCAACCGGGAAAACCATGtagtcatt > 2:2472977/1‑133 (MQ=255) gATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCGTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTa > 2:928392/1‑140 (MQ=255) tAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCGTCCTGGCGTGCGCTATTGATGGTTCCTTCAAGTCGCCGCCAATGTGACCCCGGCCAACCCTGTTGGCAGttttt > 1:1964841/1‑137 (MQ=255) tAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATg < 1:793179/140‑1 (MQ=255) ctCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGcc < 2:3986754/139‑1 (MQ=255) aTCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGcc < 2:3138996/140‑1 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTGGCGTCCTGGGGTGCTGTATTGATTCTTGCGTCATGTCGCCGACAAAGTCACCCGGGCCAAACAGGTTGGCAGTTATGCCgcaat > 1:1421464/1‑136 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTGCTTGCCGATTCGCTTCCTGGCGTACGCTATTGATGCTTCCTTCAAGTCGCCCACAAAGTCACCCGGGCACACCAAGTTGGCAGTTATGCCGAAtt > 1:4990777/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTAGCTTCCTGGCGTGCTCTATTGATGCTTCCATCATGTCGCCGACAAAGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAAtt > 2:3148929/1‑140 (MQ=255) ggCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTGCTTGCCGATTCGCTTCCTGGGTTCCTCTATTGATGGGTCCTTCATGTCGCCGACAAAGTCACCCGGGCAAACCATGTTTGGCGGTATGCCGAAtt > 1:3426547/1‑140 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:2022324/140‑1 (MQ=255) atatCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:1473511/140‑1 (MQ=255) atatCCACGCCGGGGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGCTTCGCGTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGc < 2:1173268/140‑1 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTca < 1:918309/140‑1 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTACGTGCCGATTCGGGTCCTGGCGTCCGCTAGTTATGCTTCCTTCATGTGGCCGACCAAGTGACCCCGGCAAACCAGGTTTGGGGGTAATCCGAAAAGGGCTTCTTca > 1:4518202/1‑140 (MQ=255) cGCCTGTGCCAGATCTTCCTATCGGCGTGTTTTCCTTGCCGAGTCGCGTACTGGCTTGGTCGAATGTTGCTTCCTTCATGTCGCCGCCAATGTCCCCCGGGCCCACCCTGTTGGCAGTTATGCCGAATTCGGCGTGTTca > 1:4649117/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCGTGCTTGCGTGCTCTATTGATTCTTGCTTAATGTCCCCGACAAAGTCACCCGGGCCAACCATGTTGGGCGTTATTCCGAATTCGGCTTCTTaaatggca > 2:231843/1‑140 (MQ=255) tgCCAGATCTTCCTATCGGCGTGTTTTACTTTCCGATTCGCTTCCTGGCGTGCTCTATTGTTGGTTCCTTCATGTCGCCGACAAAGTCACCCCGGCCAACCAGGTTGGCAGTTATTCCGAAATGGGCTTCTTcaaatgca > 1:2554898/1‑135 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 1:1240319/140‑1 (MQ=255) gCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTcaatggcaa < 2:3624810/140‑1 (MQ=255) gATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGc < 1:1552810/59‑1 (MQ=255) gATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGt > 2:3799118/1‑140 (MQ=255) aTCTTCCTATCGGCGTTTTTTGCTTTCCGATTGGCTTGCTGGCTTCCTCTATTGATTCTTGCTTGATGTCGCCGGCAATGTCACCCGGGCAAACCATGTTTGCAGTTATTACGAATTCGGCTTCTTAAATGGCAATTGtg > 2:502458/1‑139 (MQ=255) tCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATTTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCg > 2:4446830/1‑140 (MQ=255) tCCTATCGGCGTTTTTTCCTTGCCGATTCGCATCCAGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCAAGTTGGCAGTTATTCCGAAATCCGCTTGTTCAATTGCAATGGTCttag > 2:5140836/1‑138 (MQ=255) tCCTATCGGCGTGTTTTGCTTTCCGCTTCGCTTCCTGGCTTCCGCAATTGATGCTTCCGTCATGTCGCCGACAATGTCACCCGGGCCAACCATGTTGGCAGTTATGCCGAAATCGGCTTCTTCAATGGCAATTGTGttag > 1:2295048/1‑138 (MQ=255) cGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAaag < 1:4163563/140‑1 (MQ=255) ttttttCCTTGCCGATTCGCTTCCTGGCTTCCGCTATTGATTCTTCCTTCATGTCGCCCACAATGTCACCCCGGCAAACCAAGTTGGCAGGTATTCCGAATTAGGCTTAGGCAATGGCAAATGTATTCCTCAAACAAGcc > 2:1365002/1‑140 (MQ=255) ttttttCCTTGCCGATTAGCTTCCGGGCTTCCTCTATTGATGCTTCCGTCATGTGGCCCACAAAGTCACCCGGGCAAACCATGTTTGCAGTTATGCCGAATTCGGCTTCTTAAAAGGCAATGGTCTTCGGCAAAGTAGcc > 2:1654263/1‑140 (MQ=255) tgttttCCTTTCCGAGTCGCTTGCTGGCTTCCTCTATTGATGCTTCCTTCAATTCGCCGACCATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCCAATTCGGCTTAATCAATGGCAATTGTCTTCGTCAAAGAATcc > 2:5096492/3‑140 (MQ=255) tttCCTTGCCGATTCGCTTCCTGGCTTCCTCTCTTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCaaa < 1:737244/140‑1 (MQ=255) tttCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCaaa < 1:3046783/140‑1 (MQ=255) tttCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCaaa < 1:3802329/140‑1 (MQ=255) tttCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCaaa < 1:5140836/140‑1 (MQ=255) ttGCCGATTCGCTTCCTGGCTTCCGCTATTTATTCTTACTTCAAGTCGCCGACAAAGTCACCCCGGCAAACCATGTTTGCAGTTATTCCCAATTCGGCTTATTCAAATGCCATTGTCTTAGTCAAAGAACCCAAAaccca > 1:3120779/1‑138 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:358516/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:962000/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa > 2:262081/1‑140 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:1655842/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:1311736/140‑1 (MQ=255) ttCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 1:633298/140‑1 (MQ=255) ttCGCTTCCGGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 2:4112408/140‑1 (MQ=255) ttCGCGTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCa < 2:2945890/140‑1 (MQ=255) | CATTGAGACCTCCGGTGGCTTCAATGACAGTGCCTGTCACAAGGTCTGAGTTCTCCTCACACAAGAAAGCGATAATCCGGGCGATATCCTCGCCTGTGCCAGATCTTCCTATCGGCGTTTTTTCCTTGCCGATTCGCTTCCTGGCTTCCTCTATTGATGCTTCCTTCATGTCGCCGACAATGTCACCCGGGCAAACCATGTTGGCAGTTATGCCGAATTCGGCTTCTTCAATGGCAATGGTCTTCGTCAAAGAAGCCAAACCCACTTTCGCAGCGCC > NZ_CP034943/2812645‑2812921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |