| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 361,344 | T→G | 6.8% | V144V (GTT→GTG) | EO946_RS01960 → | FAD/NAD(P)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 361,344 | 0 | T | G | 6.8% | 1053.1 / 10.6 | 451 | V144V (GTT→GTG) | EO946_RS01960 | FAD/NAD(P)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base T (227/170); new base G (51/2); total (279/172) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.58e-09 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 474 total aligned reads displayed.
AGCACTGCGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGG > NZ_CP034943/361205‑361482 | cACTGCGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGtttt > 1:4618310/1‑140 (MQ=255) gCGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACATGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTTTTGGAAGCGGAGACAGATAGCTCTTTTAATCTCAGGGGGGAAGGAGTAGTTTTatga < 1:1367946/140‑4 (MQ=255) cGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGttttttcca > 2:140236/1‑135 (MQ=255) cGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCa > 1:3643865/1‑140 (MQ=255) cGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCa > 2:2409003/1‑140 (MQ=255) cGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCa > 2:3612303/1‑140 (MQ=255) gagaCTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGACGGGCAAACGGGTTGTGGGAAGCGGAGCCAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCAt < 2:3870055/140‑1 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGACGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTATCCAAGAGtatt > 1:1992043/1‑140 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTATCCATTAGtttt > 1:3438945/1‑140 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGtt > 1:2279476/1‑125 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCATGAGtttt > 1:4141713/1‑140 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGtttt > 1:5169120/1‑140 (MQ=255) tgCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCAAGAGtttt > 1:4958669/1‑140 (MQ=255) cTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTtc > 1:3064694/1‑140 (MQ=255) aTGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcat < 2:458924/140‑1 (MQ=255) aTGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcat < 2:3940249/140‑1 (MQ=255) aTGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcat < 2:114565/140‑1 (MQ=255) aaaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAg < 2:4959060/140‑1 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCACACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTAGCCATGAGTTTTTCTCATAAGc > 2:2647345/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCAAGAGTTTTTCTCATCAGc > 1:1881190/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCCTGAGTTTTTCTAAACAGc > 2:2817092/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcatcatc > 2:1357554/1‑138 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTATCCATGAGTTTTTCTAATCAGc > 2:2800912/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGc > 2:3736317/1‑140 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGttt < 1:3253063/111‑1 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGttt > 2:3253063/1‑111 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCcttct < 1:3848459/140‑1 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATAAGCcttct > 2:1902182/1‑140 (MQ=255) tatGGATCAAGCATGGAAAACAGGCATGGTGCCAAATTTGAGAAGGGCAAACGGGGTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCCGCcttctt > 2:23138/1‑140 (MQ=255) tatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTACCCATGAGTTTTTCTCCTCCGccgtagt > 2:2367610/1‑135 (MQ=255) gATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTAGCCATGAGTTTTTATCATAAGCCGTCTTGGcc > 1:3787235/1‑140 (MQ=255) aTCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCg > 2:290894/1‑140 (MQ=255) tCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGATTTTTTCCCATCAGCCTTCTTGGCCgg > 2:1289942/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGCCAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTCTCATCACCCTTCTTGGGCGGAGt > 1:1618893/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTCTCATAAGCCTTCTTGGGCGGAGt > 1:4432771/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGcc > 1:2358090/1‑126 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTTGCCGGAGt > 2:4144758/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGt > 2:3050537/1‑140 (MQ=255) tGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCCGGAGTTTTTGTCAGCACCCGTCTTGGCCGGAGTGGGc > 1:791266/1‑140 (MQ=255) gAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTAGCCCTGAGTTTTTCTCATCACCCTTCTTTGCCCGACTGGGcca > 2:1016864/1‑138 (MQ=255) gAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCaa > 1:2189103/1‑140 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGCAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:3299154/140‑1 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:5071328/140‑1 (MQ=255) aGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCCGAGTGGGCAAAACCAt > 2:807549/1‑140 (MQ=255) gCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCCAGAGTTTTTATCATCAGCCGTCTTGGCCGGAGTGGGCAAAAcaaatt > 1:399072/1‑135 (MQ=255) tGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTATCCATGAGTTTTTGTAATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAg > 1:1045941/1‑140 (MQ=255) aCAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAg < 1:3231753/140‑1 (MQ=255) aaaTTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTATCATCAGCCGTCTTGGCCGGAGTGGGCAAAACCATTTAAGAATAGCg > 1:1512977/1‑140 (MQ=255) aaTTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCgg < 2:5136326/140‑1 (MQ=255) tttGAGCAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCa < 2:4443868/140‑1 (MQ=255) gggCAAACGGGTTGTGGGAAGCGTAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCAt < 2:3338889/140‑1 (MQ=255) gggCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTAGCCATGAGTTTTTCTCAACCGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATCGCGGCATTTATCAt < 2:1565717/140‑1 (MQ=255) cAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAACAATTCAGTATAGCGGCATTTATCAtgtg > 2:3387588/1‑140 (MQ=255) cAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTACCCAATATTTTTTATAATCAGCCGTCTTTGCCGGAGTGGGCAAAACCATTTAAGAAAATCGGCATTTAtaaagtt > 2:4006056/1‑134 (MQ=255) aaCGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGtt < 1:1447783/140‑1 (MQ=255) gggTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGa < 2:1756782/140‑1 (MQ=255) gTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCAAGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGGGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACa < 1:4710486/140‑1 (MQ=255) gTTGTCGGAAGCCGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACa < 2:78918/140‑1 (MQ=255) ttGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGGTTTTGTCATAAGCCTTATTTGGCGGAGTGGGCAAAAACATTTAAGTATAGCGGCATTTATCATTTGTTTGagag > 2:4358548/1‑140 (MQ=255) ttGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGGCGGAGTGGGCACAAACATTTCAGAATAGCGGCATTTATAATGTGttttaaag > 1:5031824/1‑135 (MQ=255) gtgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACagag < 1:1237224/140‑1 (MQ=255) tgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCAtgtg > 2:2985855/1‑129 (MQ=255) tgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGCGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACagaga < 2:3801014/140‑1 (MQ=255) aaGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTg < 2:4523506/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 2:4749908/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 2:1089227/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 2:2016829/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 1:2853135/140‑1 (MQ=255) gCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCAATAGTTTTTGTCATAAGCCTTCATGGGCGGAGTGGGCAAAAACAATTCAGAAAATCGGCATTTATAATGTTTTTTTGAGAGAGGTGcc > 1:714819/1‑139 (MQ=255) gCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCa < 2:2189103/140‑1 (MQ=255) aCAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGTGTTTTTCTCATAAGCCTTCTTGGGCGGGGTGGGCCCAACCAATTAAGAAAAGCCGGATTTATCATTTGTTTTGCCGCGAGGTGCACGAGGt > 1:1077929/1‑140 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCGGGAGGGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGAACTAGAGGTGCACGATGTa > 2:3107292/1‑140 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:3387148/140‑1 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:2080776/140‑1 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:274777/140‑1 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:379721/140‑1 (MQ=255) gagaCCGCTGGTACTCTCAGGGGGGAAGGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATACCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAg < 1:2978857/137‑1 (MQ=255) tACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTGTCATCAGCCTTCTTTGCCGGAGTGGGCAAAACCATTTGAGAATAGCCGCATTTATAATGTGGTTGAAAGAGAGGTGCACGATGTAAGCa > 2:1856361/1‑140 (MQ=255) tACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTATCCATGAGTTTTTGTCATAAGCCGTCTTGGCCGGAGTGGGCCAAACCAATTCAGAATAGCGGCATTTATCATGTGTTTTTCAGAGAGGTGCACGATGTAAACa > 1:4335538/1‑140 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGGCGTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATGATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAg > 2:1226228/1‑140 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAg < 1:3508284/140‑1 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGACTTTTTATGATACGCCTTGTTTGCCGGAGTGGGCCAAACCATTTGAGAAAAGCGGCATTTATCATTTTTTTGACAGAGAGGTGGACGATGTAAGCAATGAAAg > 2:553826/1‑140 (MQ=255) tACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcat < 1:2397724/46‑1 (MQ=255) tACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTATCATCAACCGTCTTGGCCGGAGTGGGCAAAACCATTTCAGAAAAGCGGCAATTATCATGTGTTTTACAGAGAGGTGCACCATGTAAGCAATGAAAGTc > 2:2526449/1‑140 (MQ=255) ctcAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCa < 1:4225363/140‑1 (MQ=255) ctcAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCa < 1:140236/140‑1 (MQ=255) cAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCaaa < 1:1586776/140‑1 (MQ=255) aGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTATCATAACCCTTCTTGGGCGGAGTGGGCAAAAACAATTAAGAATAGCGGCCTTTATAATGTGTTTGACAGAGAGGTGCACGATGTAAACAAATAAAGTCTTCaaaa > 1:4810667/1‑139 (MQ=255) aGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCGTTGCCCGATTGGGCAAAACCATTTCAGAATAGCGGGCTTTATCATGTTTTTGAACGAGAGGGTCCAGATGTAAGCAAAGTAAGTCTGCaact > 2:3520374/1‑138 (MQ=255) gggggAACGAGGCGTTTTAGCCATGAGTTTTGCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCCGAATAGCGGCATTTCTCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATgg < 1:1728428/140‑1 (MQ=255) ggAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCAATTAAGAATAGCCGCATTTAACATGTGTTTGACCGAGAGGTTCACCATGTAAGCAAATAAAGTCTTCAAAAGGCAg > 2:4287027/1‑140 (MQ=255) aaCGAGTCGTTTTAGCCCTGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAACATTTCAGAATAGCGGCATTTATAATGTGTTTGAGAGAGAGGTGCACGATGTAAGCAATGAAAATCGTCCAATGGCACtt > 2:4908459/1‑140 (MQ=255) aCGAGTCGTTTTAGCCCTGAGTTTTTCTCAACAGCCTTCTTTGGCGGAGTGGGCAAAACCATATAAGAAAAGCGGCAATTATAAAGTGTTTGACAGAGAGGTGCACGATGTAAGCAAGGAAACTATGGAAATTGCAGTtg > 2:631179/1‑140 (MQ=255) tCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGACTAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGc < 1:2580030/140‑1 (MQ=255) tCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGc < 1:1942417/140‑1 (MQ=255) tCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGc < 2:1595024/140‑1 (MQ=255) tCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGc < 1:4543224/140‑1 (MQ=255) cGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCg < 2:5041809/140‑1 (MQ=255) gTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCgg < 2:1609222/140‑1 (MQ=255) ttttAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCggg < 1:864046/140‑1 (MQ=255) | AGCACTGCGAGACTGTGCTAGATGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGG > NZ_CP034943/361205‑361482 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |