| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,319,721 | T→G | 5.2% | pseudogene (584/1292 nt) | EO946_RS17170 ← | arabinogalactan endo‑beta‑1,4‑galactanase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,319,721 | 0 | T | G | 5.2% | 847.8 / 5.8 | 315 | pseudogene (584/1292 nt) | EO946_RS17170 | arabinogalactan endo‑beta‑1,4‑galactanase |
| Reads supporting (aligned to +/- strand): ref base T (113/175); new base G (24/2); total (137/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.34e-08 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 325 total aligned reads displayed.
CCTTCCTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTC > NZ_CP034943/3319583‑3319859 | cctgcctgCCGTTTCAGGATTGGTAAACTGCAGTGCGACCAAAATCCCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATGTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGttt < 2:2857901/140‑1 (MQ=255)ccTTCCTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGttt < 2:2981456/140‑1 (MQ=255)ccTTCCTGCAGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGttt < 2:4722551/140‑1 (MQ=255) tCCTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCATGTCGTTTCAt > 2:2064418/1‑140 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 1:2619282/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:1410195/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:3413597/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:2240724/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:1077844/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:3928364/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 2:3140116/140‑1 (MQ=255) cTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCGTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAttt < 1:4950580/140‑1 (MQ=255) tGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTc < 1:4501410/140‑1 (MQ=255) tGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTc < 1:4620449/140‑1 (MQ=255) gCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTcc < 2:1318003/140‑1 (MQ=255) tttCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCGTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCCAcc > 1:2365528/1‑140 (MQ=255) aGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGaa < 2:1728498/140‑1 (MQ=255) aGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTCCAAATGCCCCTGTCGTTTCAATTCCGACCTGaa > 2:3062570/1‑140 (MQ=255) aGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTCCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGaa < 2:2532973/140‑1 (MQ=255) gATTGGTAAAATGCAGTGCGACCACAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAAcc < 1:2909045/140‑1 (MQ=255) gATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAAcc < 1:60729/140‑1 (MQ=255) gTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGcc < 2:1519008/140‑1 (MQ=255) tAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCa < 2:1364572/140‑1 (MQ=255) aTGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCACTGTCGTTTCATTTCCGACCTGAACCATGCCAATGt > 1:1383084/1‑140 (MQ=255) tGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTc < 2:1555673/140‑1 (MQ=255) cAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGa < 1:4813071/140‑1 (MQ=255) gTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGGTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAAAGTCGACg > 1:4325275/1‑140 (MQ=255) gTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACg > 2:70668/1‑140 (MQ=255) tGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGc > 1:3549223/1‑140 (MQ=255) tGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGc > 1:2752717/1‑140 (MQ=255) tGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGc < 2:381371/140‑1 (MQ=255) tGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGc > 1:2107114/1‑140 (MQ=255) tGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTACGACCTGAACCATTCCAATGTCGACGc > 2:4849186/1‑140 (MQ=255) tGCGACCAAAATACCTGGGTCCGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGc > 2:4406434/1‑140 (MQ=255) aCCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGccttc < 2:2752717/140‑1 (MQ=255) aCCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGccttc < 2:2331253/140‑1 (MQ=255) ccAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAATTCCGACCTGAACCAAGCCAATGTCGACGccttcc > 1:3180634/1‑140 (MQ=255) cTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGatcatc < 2:4063928/140‑1 (MQ=255) tGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCCATGTCGACGCCGTCCGTGATCATCt > 1:3937294/1‑140 (MQ=255) gggTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTACGACCTGAACCAGGCCCAAGTCGACGCCGTCCGTGATCATCtt > 1:767638/1‑140 (MQ=255) ggTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCCAGGTCGACCCCTTCCTTGATCATCttt > 2:3143698/1‑140 (MQ=255) ctgtctCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGc < 2:5105782/140‑1 (MQ=255) tgtctCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTgga > 2:4624194/1‑138 (MQ=255) tgtctCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCa < 2:3593995/140‑1 (MQ=255) tctcCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCAGTTCCGACCTGAACCATGCCCATGTCGACGCCTTCCTGGATCATCTTTTTCAgg > 1:3589863/1‑140 (MQ=255) tcCCTGACCGCGCTGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCt < 2:2926913/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCttt < 2:3549223/140‑1 (MQ=255) ccTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTACCACCTGAAAAATACCAATGTCTACGCCTTACTTGATAATCTTTTGCAGGCttt > 1:872139/1‑140 (MQ=255) cTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTg > 2:1994861/1‑140 (MQ=255) tGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGt < 1:504260/140‑1 (MQ=255) tGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGt < 1:4869806/140‑1 (MQ=255) gACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATTCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGtt > 2:2727710/1‑140 (MQ=255) gACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCGTTTGCAGGCTTTGtt > 2:3361421/1‑140 (MQ=255) gACCGCGCGGCGTCCTTCATTAAATAATTGGCTCAGTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATCTCGACCCCTTCCGTGATCCTCATTTGCAGGCgttgtt > 2:3716218/1‑140 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCg < 1:3724079/140‑1 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCGTGATCATCTTTTGCAGGCTTTGTTTCg > 1:908923/1‑140 (MQ=255) cgcgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAAACATGCCCATGTCGACGCCTTCCGTGATCATCTTTTGCAGGCTTTGTTTCg > 2:829035/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 1:2281037/140‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta > 2:1610048/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 1:4463315/140‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 1:1771923/140‑1 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCGTGATCATCTTTTGCAGGCTTTGTTTCGta > 2:4500428/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAAATTCGACGCCCTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta > 1:2473914/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTAATTTCCGACCTGAAACATGCCAATGTCGACGCCTTCCGTGCTCAACTTTTTCAGGCTTTGTTTCGta > 1:3125762/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTAATTTACGACCTGAACCAATCCAAATTAGAAGCCTTCCTTGATAATATTTTTAACGCTTTGTTTAGta > 1:3270826/1‑140 (MQ=255) cgcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAAGGTCGTCGCCTTCCGTGATGCTCTTTTGCAGGCGGTGGTTCgga > 2:4999591/1‑138 (MQ=255) cgcgGCTTACTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGta < 1:1601733/140‑1 (MQ=255) gcgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat < 1:3820639/140‑1 (MQ=255) cgGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCAAGCCAATGTCCACGCCTTACTTGATCATATTTTGGAGGCTTTTTTTCGtcta > 1:5143097/1‑140 (MQ=255) ataatTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGtat > 1:3011338/1‑123 (MQ=255) tGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCGTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGttttttt < 2:4919293/140‑1 (MQ=255) tGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGttttttt < 1:1206449/140‑1 (MQ=255) tGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGttttttt < 1:1960422/140‑1 (MQ=255) tGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATACCCCTGTCGTTTCATTTc > 2:4035985/1‑55 (MQ=255) ggCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGCACCATGCCAATGTCGACGCCTTCCTTGATCATCTTGTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTa < 1:70668/140‑1 (MQ=255) tCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCg > 1:5171462/1‑111 (MQ=255) cagtttCGCACAATCGGTTTCACCTGCAAATGCCGCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGATTTGTTTCGTATACTCCTATAGCTTTGTTTTTTTAGCtt < 1:1417665/137‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:58103/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:1266517/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:4118680/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:4177672/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTCGTTTTTTTAGCtt < 2:522710/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCAGGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:4356197/140‑1 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCC‑ACCTGAACCATGCCAATGTCGACGCCTTCCTTGatc > 2:3649865/1‑87 (MQ=255) cATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTGTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTACGTATACTCATAGAGCTTTGTTTTTTTAGCtt < 2:212425/140‑1 (MQ=255) tttCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGTCCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATGTTTTGCAGGCTTTGTTTCGTATACTCATAGAGGTTTGTTTTTTTAGCTTCaa > 2:2434464/1‑140 (MQ=255) cccAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCAGAACCATGCCAATGTCGACGCCTTCCTTGATCCTCTTTTGCAGGCGTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTg > 2:954147/1‑140 (MQ=255) tCGGTTTCACCTGCAAATGCCCCTGTCGTTTGATTTACGACCGGAACCAAGCCCAGGTCGACGCCGTCCGTGATCATGTTTTTCAGGCGTTGTTTGGTTTACTCATAGAGGTTTGTTTTTTTTTCTTCAAAGCTGAGCtt > 1:12875/1‑140 (MQ=255) tCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCCATGTCGACGCCTTCCGTGATGATGTTTTGCAGGCTTTGTGTGGTATACTCCTAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCtt > 2:4606510/1‑140 (MQ=255) tCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCGTCCGTGCTCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCGTTGTTTTTTTAGCTTCAAAGCTGAGCtt > 2:4456097/1‑140 (MQ=255) tCGGTTTCACCTGCAAATGCCCCTGTCGTGTGATTTCCGACCTGAACCATGCCAATTTCGACGCCGTCCTTGATCATCTTTTGCAGGCTTTGTTTGGTATACTGATAGAGGGTTGTTTTTTTATCTTCTAAGCTGGGCtt > 1:1094581/1‑140 (MQ=255) cACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCaa < 2:261869/140‑1 (MQ=255) aCCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCACTGTCGACGCCTTCCTGGATCATCGTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAg > 2:3763324/1‑140 (MQ=255) aCCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTGCTTGATGATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAg > 2:3199054/1‑140 (MQ=255) aCCGGCAAATGCCCCTGTCGTGTCATTGCCGACCTGACCCATGCCAATGTCGACGCCTTCCTTGATCATCTTTGGCAGGCTTTGTTACGTCTACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAg < 2:1161557/140‑1 (MQ=255) cTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCt < 1:471914/140‑1 (MQ=255) tGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCtt < 1:4223966/140‑1 (MQ=255) tGCAAATGCCCCTGTCGTTTCATTTCCGAACTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCtt < 1:2015906/140‑1 (MQ=255) tGCAAATGCCCCTGTCGTTTCATGTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTACAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCtt < 1:100374/140‑1 (MQ=255) aaaTGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTgg < 1:985943/140‑1 (MQ=255) | CCTTCCTGCCGTTTCAGGATTGGTAAAATGCAGTGCGACCAAAATACCTGGGTCTGTCTCCCTGACCGCGCGGCTTCCTTCATTAAATAATTGGCTCATTTTCGCCCAATCGGTTTCACCTGCAAATGCCCCTGTCGTTTCATTTCCGACCTGAACCATGCCAATGTCGACGCCTTCCTTGATCATCTTTTGCAGGCTTTGTTTCGTATACTCATAGAGCTTTGTTTTTTTAGCTTCAAAGCTGAGCTTCGCCCAAGCTTTGGGTACCTTCTGTTTC > NZ_CP034943/3319583‑3319859 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |