| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 361,366 | C→A | 8.1% | Q152K (CAG→AAG) | EO946_RS01960 → | FAD/NAD(P)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 361,366 | 0 | C | A | 8.1% | 954.4 / 14.4 | 405 | Q152K (CAG→AAG) | EO946_RS01960 | FAD/NAD(P)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (164/185); new base A (51/2); total (218/187) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.85e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 423 total aligned reads displayed.
TGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGGCTGCTCATTACGC > NZ_CP034943/361227‑361505 | tGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCAAGAGTTTTTatcatc > 2:1839170/1‑140 (MQ=255)tGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcatc > 2:1586776/1‑140 (MQ=255)tGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCtcatc > 2:3827643/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGTCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGGTTTAGCCATGAGTTTTTATAATAAGc > 1:2637147/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTGGTGTTTGGCATGGGGTTTTCTCTTGAGc > 2:4710486/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGc > 2:2920172/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCAGTGTTTTTTGTCATCAGc > 1:1263068/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGc > 2:3736317/1‑140 (MQ=255) aaTACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCAATAGTTTTTCTCATCAGc > 2:3918588/1‑140 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTGTCATAAGCcttct > 1:4749908/1‑140 (MQ=255) atatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCcttct > 1:3188130/1‑140 (MQ=255) tatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTACCCATGAGTTTTTCTCCTCCGccgtagt > 2:2367610/1‑135 (MQ=255) tatGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCcttctt > 2:5025063/1‑140 (MQ=255) atGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCACCCGTCTTg > 1:2077656/1‑140 (MQ=255) gATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCCAGAGTTTTTGTCATAAGCCTTCTTGGcc > 1:1781800/1‑140 (MQ=255) aTCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTTGCCg > 1:1072770/1‑140 (MQ=255) tCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTTGCCATGAGTTTTTCTCATCAGCCGTCTTGGCCgg > 1:3620233/1‑140 (MQ=255) tCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCAAGAGTTTTTGTCATCAGCCTTCTTTGCCgg > 1:4835263/1‑140 (MQ=255) cAAGCATGCAATAAAGCCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGCAGACAGATACCGCTGGGACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGa < 2:4301223/140‑1 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTCTCATAAGCCTTCTTGGGCGGAGt > 1:4432771/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTGTCATCAGCCGTCTTTGGCGGAGt > 1:1504432/1‑140 (MQ=255) aGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGcc > 1:2358090/1‑126 (MQ=255) ggAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTATAATAAGCCTTCTTTGGCGGAGTGGGCa > 1:1640505/1‑140 (MQ=255) ggAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATGACCCGTCTTTGCCGGCGTGGGcc > 1:3981618/1‑139 (MQ=255) gAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGACCGAGTCGTTTTAGCCCTGAGTTTTTCTCATCACCCTTCTTTGCCCGACTGGGcca > 2:1016864/1‑138 (MQ=255) gAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTTGCCCTGAGTTTTTGTCATAACCCGTCTTTGCCGGCGTGGGccc > 1:1556956/1‑138 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:2172470/140‑1 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:773855/140‑1 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:1443158/140‑1 (MQ=255) aaCAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAc < 1:1381947/140‑1 (MQ=255) cAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCATCCTTCTTTGCCGGATTGGGCAAAACCa > 2:2581154/1‑140 (MQ=255) cAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCa > 2:192669/1‑140 (MQ=255) gCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCAttt < 1:3050537/140‑1 (MQ=255) aaTTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCgg < 2:4137024/140‑1 (MQ=255) tttGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCa < 2:4588431/140‑1 (MQ=255) tGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCctt < 1:2458795/99‑1 (MQ=255) tggCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCAt < 2:5142070/139‑1 (MQ=255) gggCAAACGGGTTGTGGGAAGCGTAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCAt < 2:3338889/140‑1 (MQ=255) gTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACa < 2:4782965/140‑1 (MQ=255) gTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACa < 2:799115/140‑1 (MQ=255) gTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACa < 1:2228857/140‑1 (MQ=255) ttGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGGCGGAGTGGGCACAAACATTTCAGAATAGCGGCATTTATAATGTGttttaaag > 1:5031824/1‑135 (MQ=255) gtgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCAAGAGTTTTTGTCATAAGACTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATATCGGCATTTATAATGTGTTTTACagat > 1:3299891/1‑139 (MQ=255) tgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACagaga < 1:1593817/140‑1 (MQ=255) tgGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTGTCTCATCAGCCTTCTGGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATGTATCATGTGTTTGACagaga < 1:1945289/140‑1 (MQ=255) aaGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTg < 2:4523506/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 1:4650332/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 1:4167251/140‑1 (MQ=255) aGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTGCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGc < 2:4457246/140‑1 (MQ=255) gCGGAGACAGATACCTCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTGTTGGCATCACCCATCTTGGCCCGAGGGGGCAAAACCATTTAATAAAAGCGGCAATTATAATGTTTATGACAAATAGGTGCa > 2:2323370/1‑140 (MQ=255) gCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTATCCAAGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCAATTCAGAATATCCGCATTTATAATGTGTTTTACAGAGAGGTGCa > 1:3792668/1‑140 (MQ=255) gCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCGTGGCCGGAGTGGGCCAAACCATTTCAGAATAGCGGCCTTTATCATGTGTTTTAAAGATAGGTGCa > 2:1133127/1‑140 (MQ=255) gCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTATCATCAGCCTTCTTGGCCGGAGTGGGCAAAAACATTTAAGAATAGCGGCATTTATAATGTGGTTTACAGAGAGTTGCa > 1:3507333/1‑140 (MQ=255) aCAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCGCATCAGCCTTCTTGGCCGGAGTGGGCCAAACCAATTGAGAATAGCGGCATTTATCATGGGTTTGGCAGAGAGGTGCACGCTGt > 2:1878310/1‑140 (MQ=255) aCAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCCTCAGCCTTCTTGGCCGGAGTGGGCCAAACCATTTCAGAATATCGGCATTTATACTGTGTGTGACCGAGAGGTGCACGATGt > 2:3021694/1‑140 (MQ=255) cAGATACCTCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGTCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:927073/140‑1 (MQ=255) cAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTa < 1:3836832/140‑1 (MQ=255) aTACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTGTCATCCTCCTTCTTTGCCGGGGTGGGCCAAACCAATTCAGAATATCGGCAATTATCATGTGTTTTACCTAGAGGTGCACGAGGTaaac > 2:3088509/1‑138 (MQ=255) aTACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCGTCTTGGCCGGCGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATTTTTTTGACAGATAGGTGCACGATGGAAGc > 2:3555464/1‑140 (MQ=255) tACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCGTCTTGGCCGGTGTGGGCAAAAACATTTTAGAATAGCGGCATTTATAAAGTGTTTGACAGAGAGGTGGACGATGTAAGcc > 2:764045/1‑139 (MQ=255) tACCGCTGGTACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGCCGTCTTGGGCGGCGGGGGCAAAACCAATTGAGACTAGCGGCCTTTATCATGTGTTTGTAAGAGAGGTGCCCGATGTAAGcc > 1:5075549/1‑139 (MQ=255) cGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATg < 1:4301424/140‑1 (MQ=255) cGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATg < 1:117510/140‑1 (MQ=255) cGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATg < 1:3410363/140‑1 (MQ=255) cTGGTACTCTCAGGGGGGACCGAGTCGTTTTTTCCATGAGTTTTTCTCCACAGCCGTCTTGGCCGGAGTGGGCAAAAACCTTTCAGAATAGCGGCCTTTATCATTGGTTTGACAGAGAGGTGCACGATTTAAGCACTGaa > 2:1188506/1‑140 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTGTCATAAGCCATATTGGCCGGAGTGGGCAAAACCATTTAAGAAAATCGGCATTTATCAAGTTTTTTAACGAGAGGTGCACGATTGAACCAAAGaaac > 2:2803231/1‑139 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTATCCAAGAGTTTTTCTCATCAGCCTTCTTGGCCGGATTTGGCAAAAACATTTAAGAAAAGCGGCATTTATAATGTGTTTGACACAGAGGTGCACGATGTAAGAAATGaaaa > 2:1703728/1‑139 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTGATCAGCCTTCTTGGCCGGAGTGGGCAAAACCAATTGAGAATAGCGGCATTTATAATGGGGTTGACAGAGAGGTGCACGATGTAAGCAAAGaaat > 2:1284107/1‑139 (MQ=255) ggTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGACTTTTTATGATACGCCTTGTTTGCCGGAGTGGGCCAAACCATTTGAGAAAAGCGGCATTTATCATTTTTTTGACAGAGAGGTGGACGATGTAAGCAATGAAAg > 2:553826/1‑140 (MQ=255) tACTCTCAGGGGGGAACGAGTCGTGTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCCAAACCAATTCAGAATAGCGGCATTTATCATGTTGTTGACAGAGAGGTGCACGATGTAAGCAAAGAAAGTc > 2:639359/1‑140 (MQ=255) ctcAGGGGGGAACGAGTCGTTTTATCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCCAAACCATTTGAGAATAGCGGCATTTATAATGTGTTTGACAGAGACGTGCACGATGTAAGCAATGAAAGTATGCa > 2:2671314/1‑140 (MQ=255) cAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTAGCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCaaa < 1:324970/140‑1 (MQ=255) gggggAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATgg < 1:2382696/140‑1 (MQ=255) gggggAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATgg < 1:4952371/140‑1 (MQ=255) ggggAACGAGTCGTTTTAGCAAAGAGTTTTTATCAACAGCCTTCTTGGGCGGAGTGGGCAAAAACATTTAACAATAGCCGCATTTATCATGTGTTTTACCGAGCGGTGCACGATGTAAGAAATGAAAGTCTGCAAATgag > 2:3254704/1‑138 (MQ=255) ggAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTATTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATGATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAACTCTGCAAAATGCAg > 2:3948804/1‑140 (MQ=255) aaCGAGTCGTTTTAGCCATGATTTTTTATCATCAGCCGTCTTGGCCGGGGTGGGCAAAACCATTTCAGAATATCGGCATTTATCATGTGTTTTTCAGGGAGGTGCACGATGTAAGCAATGAAAGTCAGAAAAAGGGAGtt > 2:5049347/1‑140 (MQ=255) aaCGAGTCGTGTTAGCCCTGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAAACATTTAAGAAAAGCGGCATTTATAATGTGTTTTACAGAGAGGTGCACGATGTAAGAAAATAAATTCTTCAAATGTCAGtt > 2:2872694/1‑140 (MQ=255) aCGAGTCGTTTTAGCCATGAGTTTTTCTCATAAGCCTTCTTGGGCGGAGTGGGCAAAAACATTTGAGAATAGCGGCATTTATAATGTGTTTGTAAGAGAGGTGCACGATGTAAGCAATGAAATTATGGAAATGGGAGTtg > 2:4364734/1‑140 (MQ=255) cGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGCAGAGCGGCATTTATCATGTGTTTGCCAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTtgt < 2:2493179/140‑1 (MQ=255) gTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTggg < 2:3438945/140‑1 (MQ=255) tCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGc < 1:4543224/140‑1 (MQ=255) cGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCg < 1:1882903/140‑1 (MQ=255) ttttAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCggg < 1:2932725/140‑1 (MQ=255) ttttAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCggg < 2:1607540/140‑1 (MQ=255) ttttAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCggg < 2:1527213/140‑1 (MQ=255) gCCCTGAGTTGTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGAt < 1:4358548/140‑1 (MQ=255) gCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGAt < 2:2115289/140‑1 (MQ=255) gCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGCGCAAAACCATTTCAGAAGAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGAt < 1:582527/140‑1 (MQ=255) tGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACg > 2:4946669/1‑140 (MQ=255) gagtggttCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTGGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACgg < 2:1436725/134‑1 (MQ=255) gAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACgg > 2:4179936/1‑140 (MQ=255) gAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACgg > 1:3769527/1‑140 (MQ=255) gAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACgg > 2:1346833/1‑140 (MQ=255) aGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGgc > 1:3902401/1‑140 (MQ=255) tttttCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGgctg < 2:3624632/140‑1 (MQ=255) tttCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGgctgct > 1:1024245/1‑140 (MQ=255) tttCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGgctgct > 2:1064841/1‑140 (MQ=255) catcaGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGGCTGCTCATTa < 1:814556/140‑1 (MQ=255) caGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGGCTGCTCATTACGc > 1:2825389/1‑140 (MQ=255) | TGAAATACATATGGATCAAGCATGGAAAACAGGCATGGTGACAAATTTGAGAAGGGCAAACGGGTTGTGGGAAGCGGAGACAGATACCGCTGGTACTCTCAGGGGGGAACGAGTCGTTTTAGCCATGAGTTTTTCTCATCAGCCTTCTTGGCCGGAGTGGGCAAAACCATTTCAGAATAGCGGCATTTATCATGTGTTTGACAGAGAGGTGCACGATGTAAGCAATGAAAGTCTGCAAATGGCAGTTGTGGGCGGGGGGATAACGGCTGCTCATTACGC > NZ_CP034943/361227‑361505 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |