| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,375,849 | T→G | 6.7% | N263H (AAC→CAC) | trxB ← | thioredoxin‑disulfide reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,375,849 | 0 | T | G | 6.7% | 794.5 / 6.4 | 291 | N263H (AAC→CAC) | trxB | thioredoxin‑disulfide reductase |
| Reads supporting (aligned to +/- strand): ref base T (89/172); new base G (28/2); total (117/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.86e-10 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 305 total aligned reads displayed.
AGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGCGTTACG > NZ_CP034943/3375713‑3375988 | gTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACGTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGACTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtttgtt < 1:2845016/140‑1 (MQ=255) ttcttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtttgttt < 1:154152/140‑1 (MQ=255) cttcGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCgtttgtttag > 1:2946510/1‑138 (MQ=255) cGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATg < 1:5030982/140‑1 (MQ=255) cGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATg < 2:4179553/140‑1 (MQ=255) cGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATg < 2:1375053/140‑1 (MQ=255) tAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGcc < 2:751278/140‑1 (MQ=255) aaTGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTAGCct > 1:928665/1‑140 (MQ=255) aaCGCTTTGTGCCGCAATACTTCCGTCTCCTGTCGCCGTTACAAGTTGGCGCAGTGACTTGTCGCGAATGTCTCCGGCAGCGAAAATACCTTCATCCTTTGTTTCCATGCGGTCGTGTGTTTAGATGTAGCcttcttact > 1:1942377/1‑137 (MQ=255) aaCGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCAt > 1:1175460/1‑140 (MQ=255) aaCGCTTTGTGCCGCAATACTTCCGTCACCTCTAGCCGTTACAATTTGGCGCAGTGAGTTTTAGCGAATGTCTCCGGAATCTAAAAAACATTCAAACTTTATTTCCATGAGGTCGTTTGTTTCTATGTAGCATTATTAAt > 2:4005623/1‑140 (MQ=255) aaCCCTTTGTGCCGCAATACTTCCGTCGCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTGGTTTCCATGCGGTCGTTTGTTTCGGCGTAGGCGTGTTCAt > 1:2019646/1‑140 (MQ=255) tttGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTa < 2:547978/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCTGTAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2967161/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:2343876/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:1290430/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:2850233/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:3157406/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:4082217/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:1413957/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:4737733/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:1121187/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:1179718/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:69786/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2153386/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2333612/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2205039/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:3670101/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:4866472/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:3565660/140‑1 (MQ=255) tCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:3175721/140‑1 (MQ=255) tCCGTCTCCTGTAGACGTTAAAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCACGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 1:2494909/140‑1 (MQ=255) tCCCTCTCCTCCAGCCGTTACACTTTGGCGCAGTGACTTTTCGCGAAGGGCTCCGGCAGCGAAAATACCTCCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGa < 2:2695134/140‑1 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAATTACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGGTGTTTGCGTCGTCATTCGTAATGCCCAGATTTTGGaa > 1:3396789/1‑140 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTGGTTGTAGCCGTCTTCATTGGTAATGGCCCGAttttggga > 1:447081/1‑136 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGGGTGTTTCGATGTAGCCTTCTTCATTCGTCATGCCCAGATTTTCGaa > 2:1598332/1‑140 (MQ=255) ccGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTGGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGaa > 2:3687465/1‑140 (MQ=255) cGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAAc < 2:2227343/140‑1 (MQ=255) cGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAAc < 2:1772149/140‑1 (MQ=255) cGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAAc < 2:1325266/140‑1 (MQ=255) tctcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTGGATGTAGCCTTCTTCATTGGTAATGACCCGATTTTCGAACgg > 1:3089509/1‑140 (MQ=255) tctcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTAGATGTAGGCGTGGTCATTGGGAATTGCCCGATTTTGGGACgg > 1:2666011/1‑140 (MQ=255) tctcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTAGATGTAGCCTTAGTGATTGGTAATTGCCCGATTTTCGAAAgg > 1:4440589/1‑140 (MQ=255) ctcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTAGCCGTCTTCAATCGTAAAGGCCAGATTTTCGAACggg > 1:1002895/1‑139 (MQ=255) tcCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGtt > 2:2161638/1‑140 (MQ=255) cTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTa < 2:2429269/140‑1 (MQ=255) tGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATTCGGTCGTTTGTTTCGATGTAGCCTTATTCATTAGTAATGCCCAGATTTTCGAAAGGGTTAg > 2:798520/1‑140 (MQ=255) tGTAGCCGTTACAATTTGGCGCAGTGACTTGTCGCGAATGTCGCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAg < 1:4361754/140‑1 (MQ=255) gTAGCCGTTACAATTTGGCGCAGTGACTGTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGa < 1:3259751/140‑1 (MQ=255) tAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATTTCTCCGGCAGCGAAAATACCTTCAACATTTGTTTCCATGCGGTCGTTTGTTTAGATGTAAACATCTTCAATAGTAAAGCCCAGATTTTAGAAAGGTTTAGAc > 2:1007539/1‑140 (MQ=255) tAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTAGATGTAGCCTTCTTCATTCGTAAGGCCCAGATTTTCGAACGGTTTAGAc > 2:2096984/1‑140 (MQ=255) gCCGTTACAATTTGGCTGAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACag < 1:4005623/140‑1 (MQ=255) gCCGTTACAAGTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTACAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGGCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACag < 2:2596550/140‑1 (MQ=255) gTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCcttc < 1:387046/98‑1 (MQ=255) tACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCCGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTAGTTTTAGCCTTCTTCATTCGGCATGCCGCGATTTTAGAACGGTTTAGAAAGTggga > 1:1309498/1‑138 (MQ=255) tACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTTTTTCGATGTAGCCTTATTCATTGGTAATGCCCACATTTTCGAACGGTTTATACACAGGaa > 1:4778751/1‑140 (MQ=255) tACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGAAAGATGaa > 2:1821436/1‑140 (MQ=255) tACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTAGATGTATCCTTCTTAATTAGTAATGCCCAGATTTTCGAACGGGTTATACAAAGGaa > 2:4400140/1‑140 (MQ=255) acgaTTTGGCGCAGTGATTTTTCGCGGATGTCTCCGGCAGCGAAAATCCCTTCAACCTTAGTTTCCATGCGGTCGTTTGTTTCGATATAGCCTTCTTCATTCGTAATGCCCAGGTTTTCAAACGGTTTAGACAGAGGAAg > 1:3683520/4‑140 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 1:137423/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 1:4894702/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 1:303969/140‑1 (MQ=255) ttGGCGCAGTGACTTTTCGCGAAGGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGc < 2:4671644/140‑1 (MQ=255) gtGGCGCTGGGACATGTCGCGCAGGTCTCCGGCAGCGAAAATAGCTTCAACCTGTGGTTCCATGCGGTCGTGTGTTGCGATGTAGCCTTCTTCATTCGTAATGCCCAGATGTTCGAACGGTTTTGACAGTGGAAGCATGc < 1:3616399/139‑1 (MQ=255) gcgcAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCCATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGAACGAGGCAGCATGCCGa > 2:630987/1‑140 (MQ=255) aGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTa < 1:2296277/140‑1 (MQ=255) aGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTa < 1:1625867/140‑1 (MQ=255) tGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCATTGTTTCCATGCGGTCGTGTGTTTCGATGTTGCCTTCTACATTCGTTATTCCCAGATATTAGAACGGGTTTTGCATAGGGCGCAAGCCGTTGTaaa > 1:5168382/1‑140 (MQ=255) tttCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTAATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCAGTCCGATGTAAATTAAt > 2:2980758/1‑140 (MQ=255) ttCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCCTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTAGAACGGTTTAGACAGAGGAAGCATGCCGCTGTAAATGaaaa > 2:2259364/1‑138 (MQ=255) ttCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGAAGTATCCATAGTCATTGGTAATTCCCAGATTTTCGAACGGTTTTGACAGAGGAAGCCTGCCGATGTAAATGAATa > 2:391486/1‑140 (MQ=255) gAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCg < 2:2659016/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGGTGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 2:1147112/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 1:4585430/140‑1 (MQ=255) aaTGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGt < 1:3801900/140‑1 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTGGATGTAGCCTTCGTCATTCGTAATGCCCCGATTTTGGAACGGTTTAGACAGAGGCAGCATGCCCATGTAAATGAATACGCCGTCTGTTTTGAATTCa > 2:4795445/1‑140 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCa < 2:3770056/140‑1 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTATTCATTCGTAATGGCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGGCGGCTGTTTTTTATTCa > 2:2867346/1‑140 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGGTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGGAGCATGCCGATGTAAATTAATACGCCGTCTGTTTTGAATTcc > 2:2773342/1‑139 (MQ=255) cGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTGTGTTTGGTTTTAGCCGTTTTGATTCGTAATGCCCCGATTTTGGGACCGTTTAGACAGAGGAAGCCTGGCGATGTAAATGAATAAGCCCTGTGtttttgattga > 1:4948561/1‑133 (MQ=255) aaaaTACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACt < 2:3848961/140‑1 (MQ=255) aaaaTACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACt < 2:5065972/140‑1 (MQ=255) cTTCATCGTTGGTTTGGATGCGGTCGTTTGTTTGGATTTATGGTTCTTGTTTCGTAATGCCCAGATTTTCGAAAGTATTAGAGAGAGGAAGCATGCCGATTTAAATGAATATGCCGTGTGTTTTGAATTCAGTTTCTTCa < 2:5166884/140‑1 (MQ=255) cTTCAACCTTTGTTTCCCTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTATTGCCCAGTTTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGATTACGCCGTCTGTTTTGAATTCACTTTCTTCa < 2:3820020/140‑1 (MQ=255) cAACCTTTGTTTCCATGCGGTCGTGTGTTTCGATGTAGCCATCTTAAATCGTAATGCCCAGATTTTAGAACGGTTTAGACCCAGGAACCAAGCCGATTTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTAACCg > 2:3267611/1‑140 (MQ=255) aCCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGt < 1:3774676/140‑1 (MQ=255) aCCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGAGGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGt < 1:3933721/140‑1 (MQ=255) cTTTGTTTGCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTATTGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCCCTTTCTTCACCGGtga < 2:4983650/140‑3 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACag < 1:2752957/68‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 1:1495933/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 1:535451/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 1:1766889/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 2:4117380/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGAc < 1:2592457/140‑1 (MQ=255) aTGCGGTCGTTTGTTTCGATGTAGCCATCTTCATTCGTAATGCCCCGATTTTCGAACGGTTTTGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTGGGTTTTGAATTCACGTTATTCACCGGTTACCGTATAGAc > 2:3483233/1‑140 (MQ=255) cGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAg < 1:4291370/140‑1 (MQ=255) gTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGcg < 2:447081/140‑1 (MQ=255) gTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGcg < 2:3396789/140‑1 (MQ=255) gtttgtttCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGcgtta < 2:67262/140‑1 (MQ=255) ttgtttCGATGTAGCCTTATTCATTCGTAATGCCCAGATTTTGGAACGGTTTATACAGAGGAAGCATGCCGATGTAAATTAAAACCCCGTCTGTTTTGAATTCAATTTCTTAACCGGTTAACGTAACGACAAGcgttacg > 2:1956392/1‑140 (MQ=255) | AGTTCTTCGACATAATGCTGAACGCTTTGTGCCGCAATACTTCCGTCTCCTGTAGCCGTTACAATTTGGCGCAGTGACTTTTCGCGAATGTCTCCGGCAGCGAAAATACCTTCAACCTTTGTTTCCATGCGGTCGTTTGTTTCGATGTAGCCTTCTTCATTCGTAATGCCCAGATTTTCGAACGGTTTAGACAGAGGAAGCATGCCGATGTAAATGAATACGCCGTCTGTTTTGAATTCACTTTCTTCACCGGTTACCGTATCGACAAGCGTTACG > NZ_CP034943/3375713‑3375988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |