| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,498,775 | C→A | 8.0% | Q2K (CAA→AAA) | EO946_RS18005 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,498,775 | 0 | C | A | 8.0% | 541.4 / 3.1 | 254 | Q2K (CAA→AAA) | EO946_RS18005 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base C (74/148); new base A (6/26); total (80/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 254 total aligned reads displayed.
AAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACA > NZ_CP034943/3498639‑3498912 | aaCGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATc > 1:3840596/1‑140 (MQ=255) aCGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATACAGGGGAGAGAAACTATGCAAATCg > 1:4301633/1‑140 (MQ=255) aCGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCg > 2:626126/1‑140 (MQ=255) cGCTTCCTATCTATTCTATCACTTTCAATATAAGGTTTGTTTAAGCCTTTTCCTTATTAATAATAATTCGCCTATTTTGATACAAATTAATAAAAACCGCCAATCTGTTTTATAAAGGGGAGAGAAAATATGCAAATCGa < 2:952967/140‑1 (MQ=255) ccTTTTTTTTAGACCACTTTCATTATACTGTTTGTTTCACCCTTTTCCTTAGGAAGAATAATTCTCCTTTTTCGATACAAATTAAGAAAAACCGTCATTCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTg < 2:4923399/140‑1 (MQ=255) ccTTTTTATTCTATCCCTTTCAATAGAAGGTTTGTTACAGCCTTTTCCTTATGAATAATAATTCGCCTTTTTTTATACAAATTAAGAAAAACCGCCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTg < 1:4943795/140‑1 (MQ=255) ccTTTTTATTATATCACTTTCAATACAAGTTTTGTTTCAGCCTTTTCCTTTTGAATAATAATTCTCCTTTTTGGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTg < 2:2443506/140‑1 (MQ=255) ttcttatAGCACTTCCAATAGAAGGTTTGTTTCAGCCTTTTCCTGATGAAGAATAATTCTCCTTTTGTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGAtctc < 1:1057934/137‑1 (MQ=255) ttattaTCTCACTTACAATATAAGTTTTGTTTCAGCCTTTTCCTTATCAACAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCTTCAATCTTTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTGAtctc < 2:1835254/140‑1 (MQ=255) tattatATCACTTTCAATAGAAGGTTTGTTTCAGACTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAATGTGAGAGAAACTATGCAAATCGACTCTGATCTcc > 2:1598888/1‑140 (MQ=255) ttatATCACTTGCAATAGACGGTTTGTTTCAGCATTTTCATTATGAAGAATAATTACCCTTTTTTTAAACAAATTAAGAAAAACCGTAAATCTGTTTTATAATGGGTAGACAAACTATGCAAATCGACTCTGATCTCCAg < 1:2580285/140‑1 (MQ=255) ttatATCAATTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAg < 2:5147635/140‑1 (MQ=255) ttatCACTTTCAATAGAAGGTTTTTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGGGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:3190825/139‑1 (MQ=255) atatCCCTTTCAATATATGGTTTTTTTCAGCCTTTTCCTTATTAATAATAATTCTCCTTTTTTCATAAAAATTAAGAAAAACCGTCAAACTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:3373512/140‑1 (MQ=255) atatCATTTTCAATTGATTTTTTTTTTAAGCCTTTTCATTTTGATTAATAATTCTCATTTTTTTATAAAAATTAATAAAAACCTTCAATGTGTTTTATAAAGGGGATAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:755858/140‑1 (MQ=255) atatCACTTTCAATATAAGTTTTGTTACAGCCTTTTCCTTATGAAGATTAATTCTACTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:5004699/140‑1 (MQ=255) atatCACTTTCAATAGATGTTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGca < 1:4796083/140‑1 (MQ=255) atatCACTTTCAATAGACTGTTTGTTTCAGCCTTTTCATTTTGAAGAATAATTCTCCTTTTTTGATAAAAATTAATAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGca < 1:305503/140‑1 (MQ=255) atatCACTTTCAATAGACGTTTTTTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATATGTTTTATAAAGGGGAGAGACACTAGGCAACTCGACTCTGATCTCCAGca < 1:534664/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:449513/140‑1 (MQ=255) atatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 1:573319/140‑1 (MQ=255) atatAACTTTCAATAGACGTTTTGTTTCAGATTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:3452480/140‑1 (MQ=255) atatAACTTTAAATAGACGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTCATACAAATTAACAAAAACGGTCAATCTGTTTTATAAAGGGGAGACAAACTATGCAAATCGACTCTGATCTCCAGca < 1:718543/140‑1 (MQ=255) acatCCCTATCAATAGAAGTTTTGTTTCAGCCTTTTCCTTATGAATAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGca < 2:3071430/138‑1 (MQ=255) tatCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATCAATAATAATTCTCCTTTTTTGATACAAATTAACAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 1:4887573/140‑1 (MQ=255) tatCACTTTAAATATAAGGTTTGTTTCAGCGTTTTCCTTATGAATAATAATTCTCCTTTTTTGATAAAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGcac < 2:3146233/140‑1 (MQ=255) atCATTTTAAATATAAGTTTTTTTTCACAATTTTCATTATTAATAATAATTCTCCTTTTTTGATAAAATTTAATAAAAACCTTCAATATGTTTTATAATGGGGTTAGAAAATATGAAAATCGACTCTGATCTCCAGcaca < 1:2784274/140‑1 (MQ=255) cTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAatat > 1:3621032/1‑140 (MQ=255) cTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAatat > 1:651421/1‑140 (MQ=255) aaTAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGaaa > 1:2339441/1‑140 (MQ=255) aaGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTg > 2:1065287/1‑140 (MQ=255) aaGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTg > 1:3809407/1‑140 (MQ=255) ttCCTTATTAATAATAATTCTCCTTTTTTTATAAAAATTAATAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCaa < 2:1668276/140‑1 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCaa > 1:1942186/1‑140 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCaa > 2:179785/1‑140 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCaa > 1:1808365/1‑140 (MQ=255) ttCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAAAATATAAACATTGAAAAAAAAATTTGGGCaa > 2:3747113/1‑140 (MQ=255) tATGAAGAATAATTCTCATTTTTTGATACAAATTAAGAAAAACCGTAAATATGTTTTATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTACAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGa < 1:2628949/140‑1 (MQ=255) ttattaataatTTTCCTTTTTTCATACAAATAAACAAAAACCTTAAATCTTTTTTAAAACGGGCAGACAAAGTATGAAAATCGACTCTGATGTCCAGCACAATATAGAAACATTGAAAAAAAAATTGTGGCAAAATGACg < 2:222591/135‑1 (MQ=255) ttaataataatTATCCTTTTTTTATAAAAATTAATAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACg < 2:4655903/135‑1 (MQ=255) agaagaaTAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAACGGGGATAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAACTGACg < 2:5023328/139‑1 (MQ=255) aataatTCTCCTTTTTTTATACAAATTAATAAAAACCGTCAATCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATc < 2:271113/140‑1 (MQ=255) aataatTCTCCTTTTTTTATAAAAATTAAGAAAAACCGTAAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATc < 1:1644489/140‑1 (MQ=255) aataatTCTCATTTTTGGATACAAATTAATAAAAACCGTCAATCTGTTTTATAACGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACACTATAGAAACAGTGAAAAAAAAATTGGGGCAAAATGACGATATc < 2:2927092/140‑1 (MQ=255) aaaaatTATCCTTTTTTGATAAAAATTAAGAAAAACCTTCACTCTGTTTTATAAAGGGGAGAGAACCTATGAAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATc < 1:2322933/137‑1 (MQ=255) ataatTCTCCTTTTTTGATACAATTTAACAAAAACCGTCAATCTGTTTTATAATGGGGATATAAAATATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGCGCAAAATGACGATATCa < 2:3330831/140‑1 (MQ=255) taatTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCat > 1:3918608/1‑140 (MQ=255) ccgcatttgttGATAAAAATTAACAAAAACCGCCATTCTGTTTTATAAAGGGGAGACAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATAttt < 2:1747020/135‑1 (MQ=255) cTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGTCAAAATGACGATATCATATTTtata > 1:2844495/1‑140 (MQ=255) cTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTtata > 2:3974222/1‑140 (MQ=255) cTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCAGATTTtata > 2:5126152/1‑140 (MQ=255) ttttGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTG‑AAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 2:3621032/140‑1 (MQ=255) ttttATACAATTTATGAAAACCCGTCAATCTTTTTTATAAAGGTGAGAGACAGTTTCCAAATCGATTCTGATCTCGAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 2:3650995/140‑1 (MQ=255) tttGATACAAATTAATAAAAACCGTCAATCTGTTTTATAAAGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGtt < 2:229353/140‑1 (MQ=255) ataaaGAAAAACCTTAAATCTGTTTTATACAGGGTATAGAAACAAATAAAATCGAAAAAGAACACCAGCACACTATATAACAATTGAAAAAAAAATTTGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGga > 1:1016912/4‑140 (MQ=255) aTTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATGTTATACGTTTTCTTTTGga > 1:3332518/1‑140 (MQ=255) ttAAAAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgag < 2:4512157/140‑1 (MQ=255) gaacaaaaaCCTCAAATTTGTTTTATAACGGGGAGAGAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGgaga < 2:720620/136‑1 (MQ=255) aaGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAc < 2:411639/140‑1 (MQ=255) taaaaaCCTTCATTCTTTTTTATAAAGGGGAGAGAAACTTTGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:4939190/139‑1 (MQ=255) caaaaaCCGTCAATCTTTTTTATAAAGGGGAGATAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGACACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGAcag < 2:252602/139‑1 (MQ=255) aCCGTCACTCTTTTTAATATAGTGGAGAGAAAATATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAATAAATTTGTGGCAAAATTACGATATCATATTTTATACGTTTTATTTTGGAGACAGcagac < 2:1278567/140‑1 (MQ=255) aCCGTCAATCTGTTTTTTAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagac < 1:1887405/140‑1 (MQ=255) ccGTCAATCTGTTTTATAAAGGGGACAGAAACTAGGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGcagaca < 1:2376143/140‑1 (MQ=255) aaacTGTTTTATAAAGGGCAGAGAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAACTGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 1:3147682/137‑1 (MQ=255) aaTCTTTTTTATAAAGGGGATAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 1:3230959/140‑1 (MQ=255) aaTCTTTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCGGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAggg < 1:1718314/140‑1 (MQ=255) atattttttATAAAGGGGAGAGAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGc < 2:4177990/135‑1 (MQ=255) cTGTTTTATAACGGGGAGATAACCTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGt < 2:595078/140‑1 (MQ=255) cTGTTTTATAAAGGGTAGACAAACTATCCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGt < 2:4406502/140‑1 (MQ=255) atGTTTTATAAAGGGCAGATAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGt < 2:3651724/139‑1 (MQ=255) tttttATAAAGGGGAGAGAAACTATGCAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:5083874/139‑1 (MQ=255) tttttATAAAGGGGAGAGAAACTATGAAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATAATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:3551326/139‑1 (MQ=255) tttttATAAAGGGGAGACAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:2529837/139‑1 (MQ=255) gTTTTATACAGGGGAGAGAAACTCTGCAACTCGACTCTGATCTCCAGCACAATATAGAACCATTGAAAAAAAAATTGGGGCAACATGACGATATCATATTTTATACGATTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:991246/140‑1 (MQ=255) gTTTTATAACGGGGATAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:4434099/140‑1 (MQ=255) gTTTTATAAAGGGTAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:2650016/140‑1 (MQ=255) gTTTTATAAAGGGGAGCGAAACGAGCCAAATCGACTCTGATCTCCAGCACAAGATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:1991627/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:3974222/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 2:4301633/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:3388780/140‑1 (MQ=255) gTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:3095821/140‑1 (MQ=255) gTTTGATAAAGGGGCCAGAAACTAGGCAAATCGACTCTGAGCTCCAGCACATTATATAAACATTGAAAAAAAAATTGGGGCAACATGACTATATCATATTTTATAATTTTTCTTTTGGAGACAGCAGACAGTGGGCGTGc < 2:1016912/140‑1 (MQ=255) gTTATATACAGCGGAGACAAACTATGCAAATCGACTCTGATCTCCAGCACAATATACACACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGc < 1:2814920/140‑1 (MQ=255) ttATAAAGGGGAGATAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtg < 2:4281654/140‑1 (MQ=255) ttATAAAGGGGAGAGAACCTATGCAAATCGACTCTGATCTCCAGCACAATAGAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtg < 2:4566885/140‑1 (MQ=255) tataAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCtgt < 1:2146898/140‑1 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATc < 1:2258299/84‑1 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 1:4547327/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 1:1342467/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTatat > 1:1232063/1‑140 (MQ=255) gggAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAAGATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGATACAGCAGACATAGGGCGTGCCTGTTGTatat > 1:3279285/1‑140 (MQ=255) agaAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACg > 1:2034112/1‑140 (MQ=255) agaAACTATGCAAATCGACTCTCATCTCCAGCACAATATCGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACg > 1:2806610/1‑140 (MQ=255) cTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTg > 1:831229/1‑140 (MQ=255) tATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGa < 1:345022/140‑1 (MQ=255) tATGAAACTCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGa < 1:3692990/140‑1 (MQ=255) aTGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGAc > 1:1926315/1‑140 (MQ=255) tGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACa > 2:3646307/1‑140 (MQ=255) tGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACa < 2:2854678/140‑1 (MQ=255) | AAAACGCTTCCTTTTTATTATATCACTTTCAATAGAAGGTTTGTTTCAGCCTTTTCCTTATGAAGAATAATTCTCCTTTTTTGATACAAATTAAGAAAAACCGTCAATCTGTTTTATAAAGGGGAGAGAAACTATGCAAATCGACTCTGATCTCCAGCACAATATAGAAACATTGAAAAAAAAATTGGGGCAAAATGACGATATCATATTTTATACGTTTTCTTTTGGAGACAGCAGACAGAGGGCGTGCCTGTTGTATATTGACGGTTTGACA > NZ_CP034943/3498639‑3498912 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |