| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,517,425 | C→A | 6.5% | H93N (CAT→AAT) | EO946_RS18090 → | SH3 domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,517,425 | 0 | C | A | 6.5% | 840.4 / 12.0 | 310 | H93N (CAT→AAT) | EO946_RS18090 | SH3 domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base C (148/130); new base A (3/28); total (151/159) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.88e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 320 total aligned reads displayed.
GATTGATTCTTATTTGGTGTCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAG > NZ_CP034943/3517286‑3517564 | ttCTTATTTGGTGTCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATtata > 2:2594377/1‑140 (MQ=255) aTTTGGTGTCAGCATAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACCGCTTAAAAATGAATTCCATCGCAAACGCTGACTGGGCAAACGTTCATTATAAAAAc > 1:4774694/1‑140 (MQ=255) aTTTGGTGTCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACGGGGCAAAGGTTCATTATAAAAAc > 1:4056938/1‑140 (MQ=255) tgtCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCaaa > 2:1776801/1‑140 (MQ=255) gtCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCaaaa < 1:1081377/140‑1 (MQ=255) gtCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCaaaa < 1:1262337/140‑1 (MQ=255) tCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAAc < 1:105787/140‑1 (MQ=255) tCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAAc > 1:3215315/1‑140 (MQ=255) cagcagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACa < 1:4621305/140‑1 (MQ=255) agcagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGTCAAAGGTTCATTATAAAAACGGCAAAACAg > 1:3011436/1‑140 (MQ=255) agcagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAg > 1:2316412/1‑140 (MQ=255) cagAGGCGTTACCTGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGc < 2:3600266/140‑1 (MQ=255) cagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGc < 2:799775/140‑1 (MQ=255) cagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGc < 2:4988913/140‑1 (MQ=255) cagAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGc < 2:2232796/140‑1 (MQ=255) cagAGGCGTTACATGTAATAACGAAGGCTTCCGCATCAAGCCAGAAAGACGATAGTCTTCACTTGGGCTAAAGCTTAAATATGATTTGCTTGGCAAACGCTGACTGGGCTAAGGTTCATTATAAAAACGGCAAAACAGGc < 2:4856175/140‑1 (MQ=255) gagGCGTTACATGTCAGAAAGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCtt < 1:581915/140‑1 (MQ=255) gagGCGTTACATGTCAGAAAGAAGGCGTCTGCATCAAGCAAGTAAGCTGATACGCTGCCCTTGGGCGACAGCTTAAAAGTGTTTTCCTTCGCATACGGTGATTTGGCAAATTTTCATTATTAAAACGGCATTGCAGGCtt < 2:1014741/140‑1 (MQ=255) agGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCttt > 1:4278851/1‑140 (MQ=255) gTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtct < 2:4968339/140‑1 (MQ=255) gTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtct < 2:2062706/140‑1 (MQ=255) ttACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtctc > 1:2546711/1‑140 (MQ=255) ttACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtctc > 1:120219/1‑140 (MQ=255) ttACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtctc > 1:3591132/1‑140 (MQ=255) ttACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGAAAAACAGGCTTTGtctc > 2:1662606/1‑140 (MQ=255) tACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTcc < 1:2196115/140‑1 (MQ=255) cAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCAtt > 2:1873200/1‑140 (MQ=255) gAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTAc < 1:2103425/140‑1 (MQ=255) aaCGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACa > 2:691108/1‑140 (MQ=255) aaCGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACa > 1:927195/1‑140 (MQ=255) aaCGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACa < 1:5163400/140‑1 (MQ=255) aaCGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACa > 2:4928409/1‑140 (MQ=255) aaCGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTGAAACCTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACa > 2:3271566/1‑140 (MQ=255) gAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTg > 2:2315359/1‑140 (MQ=255) aGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATaaa > 1:3803043/1‑101 (MQ=255) aGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTa > 2:3398181/1‑140 (MQ=255) tCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAagc < 1:2612461/140‑1 (MQ=255) tCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACGGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATGATAAAAACGGCAAAACAGGCTTTGTCTCCCCTCATTACATTGTAAAagc > 2:4497511/1‑140 (MQ=255) cATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACATCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCt > 2:159453/1‑140 (MQ=255) cATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCt > 1:689082/1‑140 (MQ=255) aTCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGAGTTCCCTCGCAAACGCTGACGGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTa < 2:2362466/140‑1 (MQ=255) aaGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCCTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaa < 1:1829292/140‑1 (MQ=255) aGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCACAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTCAAAGCAGCTacaac > 1:4019166/1‑140 (MQ=255) aGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaac > 1:4376540/1‑140 (MQ=255) aGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaac > 1:3075711/1‑140 (MQ=255) aaaGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaa > 1:2290246/1‑133 (MQ=255) aaaGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaa < 2:3773407/133‑1 (MQ=255) aaaGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTacaa < 2:2290246/133‑1 (MQ=255) ccGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCaaaa > 1:4162307/1‑87 (MQ=255) ccGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTGCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAAcc > 2:3056053/1‑140 (MQ=255) aTACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGtct > 1:4993592/1‑96 (MQ=255) cACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAAc > 2:1718737/1‑140 (MQ=255) tattGGGCGAAAGCTAAAAACTTATTTCCTTCGCAAACGGTGACTGGGAAAATTTTCATTAAAAAAACGGAAAAACAGGGTTTGTCTCCACTCATTACTTTTTAAAAGCAGATAAAACATTAAAAACCAAAAAAAACACg < 1:174814/138‑1 (MQ=255) agttGGGCTACAGCTTAAAACTTATTTCGTTCGAAAACGCTTACTGGGAAAAGGTTCATTATAAAAACGGCAAAACAGGGTTTGTCTCAAATCTTTACATTGTAAAAGCAGATAAAACATTAAAAACCAAAACAAAAACg < 1:2822809/138‑1 (MQ=255) tttGGGCTACAGCTTAAAACTGATTTCCTTCGAAAACGCTTATTGGGCAAAGTTTAATTATAAAAACGGAAAAACAGGCTTTGTCTCCACTCATTCCATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAACACGa < 1:3265669/139‑1 (MQ=255) tttGGGCGACAGATTAAAATTTATTTCCTTCGCAAACGCTGACTGGGAAAAGGTTCTTTATAAAAACGGCAAAACAGGTTTTGTCTCCAATCTTTACATTGTAAAAGCAGATACAACAGTAAAAACCAAAAAAAAAACGa < 1:3743663/139‑1 (MQ=255) cTTGGGGGACAGCTTAAAACTGATTTCCTTCGAAAACGCTGAGTGGGCAAAGGTTCATTATAAAAACGGCAACACAGGCTTTGTCTCCACTCATTACATTTTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGa < 2:1037626/140‑1 (MQ=255) cTTGGGCTACAGATTAAAACTTATTTCCTTCGAAAACGCTGACTGGGCAAAGTTTATTTATAAAAACGGCAAAACAGGCTTTGTGTCCAATCATTAATTTGTAAAAGCAGCTACAACTGTAAAAACCAAAACAAAAACGa < 1:4830395/140‑1 (MQ=255) cTTGGGCTAAAGCTTAAAACTTATTTCTTTCGCAAACGCTGACTGGGAAAAGGTAAATTATAAAAACGTCAAAACAGGCTTTGTCTCCACTCATTAAATTGTAAAAGCAGCTACAACATTAAAAACCAAAACAAAAACGa < 2:2020689/140‑1 (MQ=255) cTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGTTTAATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGa < 2:4016681/140‑1 (MQ=255) tgtgCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGATTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 2:4680093/137‑1 (MQ=255) tGGGCTACTGCTTAAAACTGATTTCCTTCGCAAACGCTGAATGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 2:3347016/140‑1 (MQ=255) tGGGCTACAGGTTAAAACTTATTTCAGTCGCAAACGCTGAGTGGGAAAAGTTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAATGCAGCTAAAACAGTAAAAACCAAAACAAAAACGaaa < 2:2870853/140‑1 (MQ=255) tGGGCTACAGCTTAAAACTGATTTCCTTCGCAAACGCTTACTGGGCAAAGGTTCATTATAAAAAGGGCAAAACAGGCTTTTTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 2:562861/140‑1 (MQ=255) tGGGCGACAGCTTAAATCTGATTTCCTTCGCAATCTCTGAGTGGGCTAATGTTCATTATAAAAACGGAAAACCAGGCTTTGTCTCCACTAATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 2:1303907/140‑1 (MQ=255) tGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 2:541067/140‑1 (MQ=255) tGGGCGAAAGTTTAAATCTGTTTACCTTCGAAAACGATGACTGGGAAAAGGTTCATTATAAAAACGGAAAAACTGGATTTGTCTCCACTCATTAATTTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGaaa < 1:1214354/140‑1 (MQ=255) gggCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAg > 1:3499852/1‑140 (MQ=255) cGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGtat > 1:3347740/1‑140 (MQ=255) aCAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTcc < 2:3193306/80‑1 (MQ=255) aCAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGtatat > 1:2662036/1‑140 (MQ=255) aCAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGtatat > 2:3119331/1‑140 (MQ=255) aCAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGtatat > 2:2134989/1‑140 (MQ=255) aCAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGtatat > 1:4552338/1‑140 (MQ=255) gCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACa > 2:3849706/1‑140 (MQ=255) aaaaCTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCg < 2:4547649/140‑1 (MQ=255) aaaaCTGATTTCCTTCCCAAACGATGACTGGGAAACTTTTAATAAAAAAAACGGAAAAACAGGCTTTGTCTCCACTCATAACATTTTAAAAGCAGCTAAAACAGAAAAAACCAAAACAAAAACGAAAGTATATACATCCg < 1:1873200/140‑1 (MQ=255) aTTTCCTTCTCAAATGCTGACTGGGCAAAGGTTAAGTATAAAAATGGAAAAACAGGATTTGTATCCACTCATTACATTGTTAAAGCAGCGACAACGGTAAAAACCAAAACAAAAACAAAAGTGTATACATCCGCTGACgg > 1:141697/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAACACGAAAGTATATACATCCGCTGAAgt > 2:2655776/1‑139 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAgg > 1:3523514/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAgg > 2:4788116/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAgg > 2:2808875/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAgg > 1:959160/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAgg > 1:161946/1‑140 (MQ=255) aTTTCCTTCGCAAACGCTGACGGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCAGCTGAAgg > 1:5087749/1‑140 (MQ=255) ccTTCGCAAACGCTGAGTGGGCAACTGTTCATTATAAAAACGGCAACACAGGCTTTGTCTCCACTCATTACATTTTAAAAGCAGCTACAACAGTAAAAACAAAACCAAAAACGAAAGTATATACATCCGCTGAAGGaaaa < 2:4145342/140‑1 (MQ=255) ccTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGaaaa < 2:1120423/140‑1 (MQ=255) gCAAACGCTTAGTGGGCAAAGTTACATTATAAAAACGGCAAACCAGGATTTGTCTCCACTCATTAAATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCAt < 2:2546711/140‑1 (MQ=255) gCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTAAAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCAt < 2:3499725/140‑1 (MQ=255) gatGACTGGGCAAAGGTAAATTATAAAAACGGCAAAAAAGGCTTTGTCTCCACTCATTACATTTTAAAAGAAGCTAAAAAAGTAAAAACAAAAACAAAACCGAAAGTATATACATCCGCTGAAGGAAAAATCATCAacac < 2:138740/138‑1 (MQ=255) gCTGACTGGGCAAAGGTTAATTATAAAAACGGAAAAACAGGCTTTGTCTCCACTCTTTACATTGTAAAAGCAGATACAACCGTAAAAACCAAAACAAAACCGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGAc < 2:648903/140‑1 (MQ=255) cTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTc < 2:5078963/140‑1 (MQ=255) ggCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCcag > 2:1520842/1‑140 (MQ=255) cAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAACCGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCcagca < 2:3552212/140‑1 (MQ=255) cAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCcagca > 2:4614263/1‑140 (MQ=255) cAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCcagca < 2:120219/140‑1 (MQ=255) cATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAg > 1:2425365/1‑140 (MQ=255) cATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAg > 1:4596843/1‑140 (MQ=255) cATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAg > 2:2434713/1‑140 (MQ=255) cATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAg > 1:2469708/1‑140 (MQ=255) | GATTGATTCTTATTTGGTGTCAGCAGAGGCGTTACATGTCAGAACGAAGGCTTCCGCATCAAGCCAGAAAGCCGATACGCTGCACTTGGGCGACAGCTTAAAACTGATTTCCTTCGCAAACGCTGACTGGGCAAAGGTTCATTATAAAAACGGCAAAACAGGCTTTGTCTCCACTCATTACATTGTAAAAGCAGCTACAACAGTAAAAACCAAAACAAAAACGAAAGTATATACATCCGCTGAAGGAAAAAGCATCAAGACTCTTCCAGCAGAGACAAG > NZ_CP034943/3517286‑3517564 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |