| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,085 | C→A | 13.1% | Q33K (CAA→AAA) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,085 | 0 | C | A | 13.1% | 636.2 / 27.7 | 279 | Q33K (CAA→AAA) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base C (129/104); new base A (2/43); total (131/148) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.43e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 280 total aligned reads displayed.
GTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCT > NZ_CP034943/548947‑549222 | gTTTTCAAAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCa < 1:3814310/140‑1 (MQ=255) aTACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTccc < 2:1303063/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTTAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:2349855/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:631756/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:475557/140‑1 (MQ=255) tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:3163760/140‑1 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:4977956/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 2:2327083/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:1759448/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:3610628/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCAAAAAGaatac > 2:2350502/1‑136 (MQ=255) acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCt < 2:3981155/140‑1 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAGTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:2050075/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCATCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:5097710/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCGGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:895711/1‑140 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:4562149/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:3467520/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 1:3437542/140‑1 (MQ=255) aaaTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt < 2:4454929/140‑1 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATTCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAATACTCCTGGCGAGTCa > 1:2542235/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:2277457/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:2139688/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAGTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:3906489/1‑140 (MQ=255) tcgagatCACGCAGTGTTTGACTAGAAATCTGGATATTCCGCATTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:2313465/135‑1 (MQ=255) tGGATATCACGCCTTTTTTGAATAGACATCTGGATATTCCGCTTTCTCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:2478931/140‑1 (MQ=255) tGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCTCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:4243451/140‑1 (MQ=255) tGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:1375528/140‑1 (MQ=255) tGGATATCACGCATTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAg < 2:241819/140‑1 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:3515568/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:4863858/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4262346/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTAGCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:4770877/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:3108763/1‑140 (MQ=255) cGCCTTTTTTGAATAGAAATCTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:1332286/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 1:887850/140‑1 (MQ=255) cGCCTTTGTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCGATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGACGCTCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATc < 2:3831662/140‑1 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATAAGt > 2:1431735/1‑140 (MQ=255) ttttAATATAAATATGGATTTTCCGCTTTATCAGCTGATTTATCGATATTTCAAAGAAAAAATGCATCAGGGCCTTATTAAAAAAGTATTTAAGCTCCCTTCCAAAAGCCTCCTGGCGAGAAAGCTTTCCATCAGTCaaa < 2:2535032/140‑1 (MQ=255) ttttAATAGAAAAGTGGATTTTCCGCTTTAACTCCAGCTTTTTCGCTATTTCAAACAAAACATGCATCAGGGGCTTATTAAAAATGGAATGAAGCTCCCTTCCAAACGAACCCTGGCGAGTCAGCTTTCCTTCAGTCaca < 2:2336988/140‑3 (MQ=255) tttGAATATAAATCTGTATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAAAGGAATGACGCGCCCTTCAAAACGACTCCTGGCGAGTCAGCTTTCCATCAGCCaaa < 2:3960701/140‑1 (MQ=255) ttGAATAGAAATCTGTATATTCCGCTTTAACAGAAGCTTTATCGCTATTTAAAAGAAAAAATGCATCCGGGGGTTATTCAAAAAGGAATTAAGCTCCATTCAAAACGACGCCTGGCGAGTCAGCTTTCCATCAGacacac < 2:2094180/140‑1 (MQ=255) caaaataaaTCTGGATATTCCGCTTTATCCCCAGCTTTATCGATATTACAAACAAAAAATCCATCAGGGGCTTATAAAAAAAGCAATCAAGCTCCCTCCCAAAAGACTCCGGCCGAGTCAGCTGCCCAGCCGTCACACGa < 2:1559078/134‑1 (MQ=255) aaTAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGAc > 2:838890/1‑140 (MQ=255) tAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTg > 2:4273752/1‑140 (MQ=255) gtGGATATTCCGCTTTAACACCAGCTTTAGCGATATTTCAAATAAAACGTGCATCCGGGGCTTATTCAAAAAGCAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTGCCATCAGTCAAACGACTGTAGAACg < 2:599468/139‑1 (MQ=255) tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAATAAAACATGCATCACGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCCAACGACTGTAGACCGt > 1:4049528/1‑140 (MQ=255) tatTCCGTTTTAGAATCAGCTTTAGCGATTTTTCAAACAAAACATGCATCCGGGGCTTATTCAAAAAGGAATTAAGCTCCATTCCAAAAGACTCCTGGCGAGTAAGCTTTCCATCCGTCAAACGACTGTAGAACGTGCCt < 2:3645089/140‑1 (MQ=255) atTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTa > 2:2855883/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACTTGCCTATg > 1:4228648/1‑140 (MQ=255) tCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATg > 1:2783797/1‑140 (MQ=255) cggtttATCAGCAGCTTTATGGCTATTTCAAACAAACAATGAATCCGGGGGTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAATACTCCGGGCGTGTCAGCTTTCCATCAGACAAACGACTGTAGAACGTGCCTATGaa < 2:2499779/137‑1 (MQ=255) cTTTATCAGCAGCTTTATCGATATTTAAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGATTGAAGCCCCCTTCCAAAACACTCGGGGGGAGTCAGTTTTCCATCCGTCAAACGACTGTAGAACGTGCCTATGAACa < 2:4500755/140‑1 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 2:1968701/1‑140 (MQ=255) tttATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAg > 2:4943936/1‑140 (MQ=255) tATCCGCAGCTTTAGCGCTATTCAAAACAAAACATGCATCCGGGGCGTATTAAAAACGGAATGAAGCGCCCTGCCACAAGACGCCTGGCGAGTCAGCTTACCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCt < 2:2999471/140‑1 (MQ=255) tCAGCAGCTTTATCGATATTTCAAAGAAAACATGCATCCGGGGCGTATTCAAAAAGTAATGAAGCTCCGTTCCAAACGACTCCTGGCGAGTCAGCTTGCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:3023823/140‑1 (MQ=255) acagcagCTTTATCGCTATTACACACAAAACATGCATCAGGGGCGTATTCAAACAGCAATCAAGCTCCCTTCCAAAACACTCCTGGCGAGACAGCTTGCCAGCAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 2:3316976/139‑1 (MQ=255) tgcTTTATGGATTTTTAAAACAAACCATGACTCCGGGGCTTTTTAAAAAAGGAATGAAGCTCCCTTCAAAAACACGCCGGGCGAGTAAGCTTTCCAACCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4273752/139‑1 (MQ=255) agttttATCGCTATTTCAAATAAAACATGCATCAGGGGCTTATTCAAAATGTAATGAAGCTCCTTTCCAAAAGCCTCCTGGCGAGACAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:4169208/137‑1 (MQ=255) agcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct > 2:4532169/1‑140 (MQ=255) agcTTTATCGATTTTTAAAACAAAACAGGCATCCGGGGCGTATAAAAAAAGGAATTAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTCCCACCAGAAACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4449123/140‑1 (MQ=255) agcTTTATCGATATTACAAACAAACCATGAATCCGGGGCTTATAAAAAAAGTAATCAAGCGCCCTCCAAAACCACTCCTGGCGAGTCAGCTTTCCAACAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:402084/140‑1 (MQ=255) agatttATCGCTATTTAAAACAAAACATGCATCCGGGGGGTATTAAAAAAGTACTGACGCTCGCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:548879/137‑1 (MQ=255) cTTTCTCGCTATTTCAAACAAAACATGCATCCGGGGCGTATACAAAAAGCAATGACGCGCCCTTCAAAACCCCCCCTGGCGCGTCAGCTTCCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:766380/140‑1 (MQ=255) cTTTATCGCTATTTCAAACAAAACATGCAACAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTGCCAAACGACTCCTGGCGAGACAGCTGTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1027855/140‑1 (MQ=255) cTTTATCGATATTCAAAATAAAACTTGAATCAGGGGCTTATAAAAAATGTAATGACGCTCCCTTCCAAAAGACTCCTGGCTCGTAAGCTTTCCATCTGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1147016/140‑1 (MQ=255) tCGCTATTTCACAGAAAACAGCCAGCCGGGGCGTATTCAAAACCTAATCAAGCTCCCTTCCAAAAGACGCCTGGCGAGTCAGCTTTCCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:4115540/140‑1 (MQ=255) tCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAACGGAATGAAGCTCCCTACCAAAAGACTCCGGGCGAGTCAGCTTTCCACCAGCCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:5018722/140‑1 (MQ=255) tCGCTATTTCAAACAAAACATGCATCCGGGGCGTATACAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:710064/140‑1 (MQ=255) tCGATATTACAAACAAAACATGAAGCCGGGGCTTATAAAAAATGTAATTAAGCGCCCTTCCAAACCACCCCTGGGGATTCAGCTTTCCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 1:518546/140‑1 (MQ=255) acGCTATTAAAAACAAAACATGCACCCGGGGCTTATCCAAAAAGGAAGGAAGCGCCCTCCCAACACACCCCGGGCTAGTCAGGTTTCCAACAGAAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCt < 2:1841199/139‑1 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:2378128/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 1:1438090/1‑140 (MQ=255) tttCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCg > 2:3705409/1‑140 (MQ=255) ctcaaTCCGGGGCGTATTAAAAAAGCAATGAAGAGCCCTTCAAACAGCCCCCTGGCGAGGCAGGTTTCCATCCGTCAAACGACTGGAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 1:2099039/136‑1 (MQ=255) aTGAATCCGGGGCTTATAAAAAAAGTAATGAAGCTCCCTTCAAAACGACTCCTGGCGAGTCAGCTTTCCACCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaag < 1:233490/140‑1 (MQ=255) aTCTGGGGCTTATTAAAAAAGTAATGACGCGCCCTTCCAAATGACTCGTGGGGAGTCAGCTTTCCATCTGGCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 2:4292922/140‑1 (MQ=255) aTCAGGGGCTAATTCAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCTGGCGAGTCAGATTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGc < 2:3223769/140‑1 (MQ=255) tCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCg > 1:4568886/1‑140 (MQ=255) atcggCGTATTCCAAAAGTAATTAAACTACCTACCAAAAGACTCCTGGCGAGTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATCTCGTGAGCAAGCCAAGAAGCGGa > 2:4681995/4‑140 (MQ=255) ggCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATgg > 2:665973/1‑140 (MQ=255) gctttttCAAAACGGAATGAAGCGCCGTTCCAAACGACTCCGGGCGAGTCAGCTTACCAACAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGt < 2:3866110/135‑1 (MQ=255) gagTATTAAAAAAGGAATGAAGCTCCCTACCAAAACACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGt < 2:3860155/138‑1 (MQ=255) tATTCAAAAAGGAATGAATCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAAGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATAGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2676405/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTc > 1:2836179/1‑47 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1058864/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1495745/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:2224890/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:1511516/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:748674/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:554913/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3747208/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2632184/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3387300/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:3310748/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2896561/1‑140 (MQ=255) aTTCAAAAAGGTTTTAAGCTCCCTTCCAAAAGAGGCCTGGCGAGTGAGGTTTCCACCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 2:1707080/140‑1 (MQ=255) aTTAAAAACGGATTGAAGCTCCATTCAAAAAGACTCGTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGc < 2:2821337/140‑1 (MQ=255) ttCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt > 1:1253447/1‑140 (MQ=255) ttCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt > 1:1137744/1‑140 (MQ=255) | GTTTTCACAAAAAAATGCATACCAGTTAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCT > NZ_CP034943/548947‑549222 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |