| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 112,531 | A→C | 6.3% | intergenic (+209/‑95) | gltX → / → cysE | glutamate‑‑tRNA ligase/serine O‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 112,531 | 0 | A | C | 6.3% | 1161.4 / 18.8 | 473 | intergenic (+209/‑95) | gltX/cysE | glutamate‑‑tRNA ligase/serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (160/264); new base C (45/2); total (206/267) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.13e-15 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 480 total aligned reads displayed.
GATCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGAT > NZ_CP034943/112395‑112670 | aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCcgc > 1:911080/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCcgc > 1:2300658/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCcgc > 1:1488907/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 1:1060812/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 2:1490751/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 2:1930057/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 1:2378407/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 1:221746/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 2:2677490/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 2:3214957/1‑140 (MQ=255) aTCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGGATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgc > 2:2122056/1‑140 (MQ=255) tCCATGAGCCGTGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCTCTATTCAAAGGCGGCCGCCGCCGTTAGAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:3473727/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGTAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCTCCGTTCCAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 2:1818701/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:1573132/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 2:2428552/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:2084555/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:1412394/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:1335056/140‑1 (MQ=255) tCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:1167240/140‑1 (MQ=255) tGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGt > 1:992/1‑140 (MQ=255) gCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTa > 2:489400/1‑140 (MQ=255) gCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTa > 2:116495/1‑140 (MQ=255) ccGGGTGTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTaa > 2:3476346/1‑140 (MQ=255) ggTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCg > 1:2012440/1‑140 (MQ=255) aGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCa < 2:2747947/140‑1 (MQ=255) aGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCa < 1:1032789/140‑1 (MQ=255) tGCGCCCTTAAGACCTCTGAAGAACAGTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTCCAGGCTGAAGTTGGGAGAGCAGACGTCTGCTTTTCAAACTGAGTGGAACCGCGCGGTTTAAGCGTCTCTggcctg > 2:4207508/1‑135 (MQ=255) gcgcCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGGATTCAAATGCGGCCGCCGCCGTTACAGGCTGACGTTGGGACAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCagtt > 2:828777/1‑137 (MQ=255) cgcCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAg < 2:69941/125‑1 (MQ=255) cgcCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAg > 1:69941/1‑125 (MQ=255) cgcCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGtt > 2:341746/1‑140 (MQ=255) aCCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCaga > 2:108350/1‑140 (MQ=255) ctctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAgg > 2:3572206/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTCCCGGCTGAAGTTGGGAGAGCCGAAGTCTGCTTTTCAAACCGAGTGGACCCGCGGGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGACgc > 2:2333174/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGATgc > 1:4030717/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCa < 1:3219503/123‑1 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc > 2:4147207/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc > 2:2905991/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc < 1:2535093/140‑1 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc < 2:1253987/140‑1 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc > 1:4144358/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGGTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgc > 1:2988221/1‑140 (MQ=255) tctGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGATGAAGTTGGGAGAGCCGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGCTTTAAGCGTCACTGTCATGTTTTCATGCAGAGgc > 2:953165/1‑140 (MQ=255) tGACGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCCAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCATAGgcgc > 2:4059173/1‑140 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTTGGAGAGCAGAAGTCTGCTTTTCAAAAAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgcgc > 2:3832713/1‑140 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgcgc > 1:50659/1‑140 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAg > 1:1844729/1‑110 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAg < 2:1844729/110‑1 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAg > 1:2671764/1‑110 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGtct < 1:3774426/115‑1 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgcgc > 1:393487/1‑140 (MQ=255) tGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGgcgc > 1:151962/1‑140 (MQ=255) cATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCttttttt > 1:800533/1‑140 (MQ=255) ttCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTgg > 2:2596645/1‑140 (MQ=255) gAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTTCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTg > 1:3030334/1‑140 (MQ=255) aGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAgg < 1:100112/140‑1 (MQ=255) aTTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGaaa < 2:393487/140‑1 (MQ=255) aTTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGaaa < 2:1332633/140‑1 (MQ=255) aaGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCaaa < 1:339754/140‑1 (MQ=255) cggcCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTGTTTTATTGTGTGAAGAGGAAATCAAATtga > 1:2061002/1‑140 (MQ=255) ggcCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATagag < 1:3344966/140‑1 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg > 1:1777248/1‑66 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACcgcg < 1:443233/66‑1 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGAAGTGGAAATCAAATAgaga > 2:2240425/1‑140 (MQ=255) gccgccgccGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAtaga > 1:4179286/1‑140 (MQ=255) gcagccgccgTTACAGGCTCAAGTTGGGAGAGCAGAAGTATGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGGGAAGAGGCAATCAAAAAgaga > 2:2491401/4‑140 (MQ=255) ggatGAAGTTTGTTGAGCAGATGTCTGCTTTTCAAACAGAGTCGAACTGCGCTGATTCAGCGTCTCTGTCATTTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAACTGGCGGGAAGCAt < 1:561408/137‑1 (MQ=255) ggCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGTTTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTAATGCTGAGGCGGTTTTTTTATTGGGTGATGAGGAAATCAAATAGAGAAGTGGGGGGAAGCAt < 1:3127436/140‑1 (MQ=255) ggCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCAt < 2:1371683/140‑1 (MQ=255) gCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGTCGAGGCAATCAAATAGAGAAGTTGGGGGAAGCAtg > 2:1439649/1‑140 (MQ=255) aaGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGTAGAGGCAATACAATATAGAAGTTGGGGGGAGCATGTGtt > 1:1099322/1‑140 (MQ=255) aaGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAAAAGAGAAGTGGGGGGAAGCATGTGtt > 2:174930/1‑140 (MQ=255) ggAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTAATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAg < 1:3856263/140‑1 (MQ=255) gagaGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTGTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 2:3359048/140‑1 (MQ=255) gagaGCAGAAGTCTGCTTGTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGa < 2:2284695/140‑1 (MQ=255) agCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATg > 1:195191/1‑58 (MQ=255) agCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGTGTAGAGGAAATCAAAAAGAGAAGTGGGGGGGACCAAGTGTTTTTTATAATg > 1:2701334/1‑140 (MQ=255) agCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGTAGAGGAAATCAAATAGAGAAGGTGGGGGAAGCATGTGTTTTTTATAAtt > 1:2579789/1‑139 (MQ=255) cTGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:354399/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGACGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:3157147/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:2464561/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:2866210/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:1200655/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:2775727/140‑1 (MQ=255) cTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTAGTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAaagaa < 1:3296853/140‑1 (MQ=255) tGCTTTTCAAACAGAGTGGACCCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGC‑TTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTGTTTAGAATGCTCAAagaaga < 2:3309189/140‑1 (MQ=255) gattttCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTAATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:3798280/138‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:2028424/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:800533/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 1:1644239/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:3797721/140‑1 (MQ=255) gCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCATCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAagaaga < 2:555182/140‑1 (MQ=255) cTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGGGACTAGGGAATCAAATTGAGAAGGGGGGGGAACCATGTGTTTTTTATAATGCTGCAAGAAGAc > 1:2156561/1‑140 (MQ=255) caCAGAGTGGAACCGCGCGGTTGAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTAGTGGGTGAAGAGGAAATCAAATAGCGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:4030717/139‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 1:1261004/140‑1 (MQ=255) aaCAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAAGCAAAGAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATa < 2:2548002/140‑1 (MQ=255) cAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACa < 2:3742570/140‑1 (MQ=255) gTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAgtgt < 2:1615237/140‑1 (MQ=255) gTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGACGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAgtgt < 2:1045914/140‑1 (MQ=255) aCCGAGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGTGTCGCTTTTTTTATTGGGTGAAGAGTAAATCAAATAGAGAAGTGGGGGGAAGAATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGAt < 1:874093/140‑1 (MQ=255) | GATCCATGAGCCGGGTTTTAGAAGTGCGCCCTTAAGACCTCTGAAGAACATTTTTCGAAATCAGTATTCAAAGGCGGCCGCCGCCGTTACAGGCTGAAGTTGGGAGAGCAGAAGTCTGCTTTTCAAACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGAGGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGAT > NZ_CP034943/112395‑112670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |