| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 549,112 | A→C | 9.0% | R42R (AGA→CGA) | EO946_RS02865 → | PLP‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 549,112 | 0 | A | C | 9.0% | 621.7 / 3.5 | 260 | R42R (AGA→CGA) | EO946_RS02865 | PLP‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base A (148/73); new base C (2/36); total (150/110) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.79e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 265 total aligned reads displayed.
TAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTA > NZ_CP034943/548973‑549248 | tAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCaaaa < 1:2296164/140‑1 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAg > 2:1250289/1‑140 (MQ=255) aGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGAAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTGCAAAAg > 1:2822607/1‑140 (MQ=255) gagaACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGAc > 2:2518978/1‑140 (MQ=255) gagaACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGAATTCAAAAATGAATGACGCACCCTTCCAAACGAc > 2:2459163/1‑140 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATCGAAAGCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTACCAAAAGACTcg > 1:2094242/1‑139 (MQ=255) aacaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTcc > 1:1882405/1‑140 (MQ=255) acaacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCt < 2:172145/140‑1 (MQ=255) caacCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTg > 2:2300375/1‑140 (MQ=255) cccAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCg > 2:1835831/1‑140 (MQ=255) aaaTGGATATCACGCCTTTGTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTGTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGt > 2:2065837/1‑140 (MQ=255) caTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAACGGAATGAAGCTCCCTTCCAAAAGCCTCCTGGCGAGTc < 1:3098119/139‑1 (MQ=255) atcgATATCACCCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTAATTCAAAGAAAACATGCATCAGGGGCGAATTAAAAAAGGAATAAAGATAACTACCAAAAGACTCATGACGAGTCa > 1:3596413/4‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAATGGACTGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:256748/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 1:1087034/1‑140 (MQ=255) aTGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCa > 2:1971261/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:2367183/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:1497930/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 2:142077/1‑140 (MQ=255) tatCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCttt > 1:884836/1‑140 (MQ=255) atCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGGTATTTCAAAGTAAACATGAATCAGGGGGGTATTCAAAAAGGAATCAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTc > 2:2853085/1‑140 (MQ=255) cACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCa > 2:273724/1‑140 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:1882405/140‑1 (MQ=255) cGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATc < 2:1202091/140‑1 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:2694106/1‑140 (MQ=255) cTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGt > 1:1008956/1‑140 (MQ=255) tttttGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCa > 1:1781409/1‑140 (MQ=255) tttttGAATAGAAATCTGGATAGTCCGATTTATCAGCTGGTTTATCGATATTTCAAATAAAACATCCACGCGGGGCGTATAAAAAAAGGAAGGAAGCTCCCTTCCAAACGACGCCTGGCGTGTCAGCTTTCCATCCGTCa < 2:2682344/140‑1 (MQ=255) ttttgGAATAGAAATCTGGATAGTCCGATTTATCCGCAGCTTTATCGCTATTTCAAACAAAACATCAATCAGGGGCGTATTAAAAAAGGAATTACGCTCCCTTCCAAAAGACTCCTGGCGTGTCAGCTTTCCTTCAGTCa < 2:3449171/140‑1 (MQ=255) tttaaTATAAATGTGTATATTCCTTTTTATCTGCAGCTTTATCGCTATTTCAAAGAAAAAATGAATCGGGGGCTTTTTAAAAAAGTAATTAAGCTCCTTTCCAAAAGACTCGTGGCTATCCAGCTTTCCATCAGTAAAAc < 2:4088492/137‑1 (MQ=255) ttGAATAGAAATCTGGTTATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCTTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAAc < 2:4121884/140‑1 (MQ=255) ttttatatTCCGGTTTATCCGCAGCTTTATCGATATTTAAAAGAAAACATGCATCAGGGGCTTATTCAAAAAGTAATGAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCATCAGACACACGACTGTAGAACg < 1:2518978/136‑1 (MQ=255) ctgttttttCCGTTTTTTCAGAAGTTTTATCGCTATTTAAAATAAAACATGCAGCCGGGGCGTATTAAAAAAGTAATGAAGCCCCCTTCCAAACGACTCCTGGCGAGTCAGCTTTCCATCCTTCAAACGACTGTAGAACg < 2:5821/133‑1 (MQ=255) cTGTATATTGCGCTTTATAAGCAGCTTTAGCGTTATTTCAAACAAAACATGCATCCGGGGCGTATTAAAAATGTAATGAAGCTCCCTTCCAAAACACACCTGGCGAGTCAGCTTTCCATCAGGCACACGACTGTAGAACg < 2:258637/140‑1 (MQ=255) tGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGt > 2:3601223/1‑140 (MQ=255) tcatatTCCGCTTTATAAGAAGATTTATCGCTATTACAACGAAAACATGAATCAGGGGCGTATCCAAAAAGCAATGAAGCTCCATTCCAAAAGCCTCCTGGCTATTAAGCTTTCCAGCAGTCAAACGACTGTAGAACGTg < 2:2555732/138‑1 (MQ=255) gATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGc > 2:163564/1‑140 (MQ=255) atTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTa > 1:1919536/1‑140 (MQ=255) ctcTTTATCAGCAGATTTATCGATATTTCAAAAAAAACATGCAACCGGGGCTTATTAAAAACGCAATCAAGCTCCCTTCCAAAAGACTCCTGGCGATACAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGaa < 1:2666469/138‑1 (MQ=255) cGCTTTATCCGCAGCTTTATCGATATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAACGGAATCAAGCTCCCTTCAAAAAGACCCCTGGCGCTTCAGCTTTCCATCAGCCAAACGACTGTAGAACGTGCCTATGaa < 1:57369/140‑1 (MQ=255) cGCTTTATCAGCAGCTTTATCGATATTAAAAATAAAAAATGCATCAGGGGCTTATTAAAAAAGGAATGAAGCTCCCTTCCAAAACACTCCGGGCGAGTCAGCTTTCCAACAGTCAAACGACTGTAGAACGTGCCTATGaa < 2:1437429/140‑1 (MQ=255) cGCTTTACCAGCAGCTTTATCGCTATTACAAACAAAACATGAATCCGGGGCTTATAAAAAAAGCAATGACGCGCCCTACCAAACCACGCCGGGCGAGTCAGCTTTCCACCCGCCACACGACTGTAGAACGTGCCTATGaa < 1:1250289/140‑1 (MQ=255) tCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCCGGGGCGTATACAAAACGCAATGACGCGCCCTTCCAAAACACCCCCGGCGAGTCAGCTTTCCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTtg < 1:666670/140‑1 (MQ=255) agtttttTCGATATTAAAAACAAAACATGCATCTGGGGCTTATAAAAAAAGGAATGAAGCCCCCTTCCAAACCACTCCGGGCGAGTCAGCTTACCACCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:2163821/137‑1 (MQ=255) agcTTTCTCGCTTTTACAAACAAAACATGCATCCGGGGCTTATAAAAAACGGACTGACGCCCCCTACCAAACGACCCCGGGCGAGCCAGCTTACCATCAGGCACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:459851/140‑1 (MQ=255) agcTTTATCTCTATTTAAAAGAAAACATGAATCCGGGGCGTATTCAAAAAGGAAGGAACCACCCTTCCAAAACACTCGTGGCGAGTCTGCTTTCCAACAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1999818/140‑1 (MQ=255) agcTTTATCGCTATTTCAAACAAAACATGAATCCGGGGCGTATTAAAAAAGGAATGAAGCTCCCTTCCAAACGACCCCTGGCGAGTCAGCTTACCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 2:884836/140‑1 (MQ=255) agcTTTATCGCTATTACAAACAAAACATGAAACAGGGGGTTATACAAAACGGAATCACGCTCCCTTCAAAAAGACACCTGGCTAGTAAGTTTTCCATCACACCAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4236754/140‑1 (MQ=255) agcTTTATCGATTTTTCAAAGAAAACATGCATCTGGGGCGTATTCAAAAAGGAATGAAGCTCCCTACCAAACGACTCCTGGCGATTCAGCTTTCAATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:3838548/140‑1 (MQ=255) agcTTTATCGATATTTCAAATAAAACCTGCAACCGGGGCGTTTTAAAAAAGCAATGACGCCCCCTTCCAAAACACGCCGGGCGAGTCAGCTTTCCACCACCCAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1445163/140‑1 (MQ=255) agatttATCGCTATTAAAAACAAAACATCCAACCGGGGCTTATAAAAAAAGTAATGACGCCCCCTACCAAAACCCTCCTGGCGAGACAGCTTACCATCAGACACACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:1925601/137‑1 (MQ=255) agatttATCGATATTTCAAACAAAACATGCATCCGGGCCTTATACAAAAAGTATTGACGCTCCATTCCAAAAGACTCCTGGCGAGTCAGCTTTCCAACAGACAAACGACTGTAGAACGTGCCTATGAACAGCTTgctgct < 1:4079180/137‑1 (MQ=255) gcTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg > 2:3812229/1‑140 (MQ=255) gatttATCTCTATTTCAAAGAAAACATGAATCAGGGGGGTATTAAAAAAGGAATGAAGGTCCCTTCCAAACGACGCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGctgctg < 2:2733090/138‑1 (MQ=255) cTTTTTCGCTATTTCAAATAAAACATGCATCCGGGGCGTATTCAAAAAGTAATGCAGCGCCCTACCAAACCACTCCTGGCGAGTCAGCTTTCCATCCGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:3068345/140‑1 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAACGACTCCGGGCGAGTAAGCTTTCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1343835/140‑1 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa > 1:3576228/1‑140 (MQ=255) cTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa > 1:387074/1‑140 (MQ=255) cTTTATCGATATTACAAATAAAACATGCATCCGGGGGGTTTACAAAAAGTAATCACCCTCCCCGCCAAACCCCCCGGGGCGATTCAGCTTCCCATCAGTCACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 1:3452052/140‑1 (MQ=255) cTTTATCGATATTAAAAACAAAACATCCATCCGGGGCGTCTACAAAAAGCAATCACGCGCCCTACCAAACCACCCCGGGCGTGACAGCTTACCATCCGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:2049561/140‑1 (MQ=255) cTTTAACCCTATTACAAACAAAACATCAATCCGGGGCTAATTCAAAAAGTAATTAAGCCCCCTTCCAAAACACTCCTGGCGAGTCACCTTACCATAATTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGa < 2:1570414/140‑1 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 2:2926732/1‑140 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:1510951/1‑140 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAggg > 1:4173492/1‑140 (MQ=255) tATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTAGTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTCTGAACAGCTTGCTGCTGAggg > 2:2225629/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:3227964/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:466205/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:89563/1‑140 (MQ=255) aTTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATc > 2:1033501/1‑140 (MQ=255) aataaaaaaTGCATCCGGGGCTTATTAAAAAAGTAATGACGCTCCCTTCCAAAATACTCGTGGCTAGTCAGTTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGc < 1:400057/137‑1 (MQ=255) aaCATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGcc > 1:1327939/1‑140 (MQ=255) cATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTATCCATCAGTCAAACGACTGTAGAACGTGACTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCaagaag > 1:3700559/1‑140 (MQ=255) tCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCg > 2:2811727/1‑140 (MQ=255) ccggggCGTATTCAAAACGGCATTACCCGCCCTTCCAAAACACTCCTGGCGCGTCAGGTGTCCATAAGACACACGACTGTAGAACGTACCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:205/138‑1 (MQ=255) ccgggcCGTATTCAAAACCTACTGACGCGCACTTCCAAAAACCTCCGGGCGAGTCAGCTTTCCAACAGTAAAACGACTGTAGAACGTGCCTATGAACAGCTTTCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCgg < 1:2362822/138‑1 (MQ=255) aGGGGCGTCTTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa > 2:1712136/1‑140 (MQ=255) aGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa > 2:2160956/1‑140 (MQ=255) aGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGa > 2:394561/1‑140 (MQ=255) gcttATTAAAAACGGAATGAAGCTCCCTCCAAAACCACGCCGGGCGAGTAAGCTTTCAACCCTTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGt < 1:1404748/137‑1 (MQ=255) gCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGt > 1:4034243/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGGTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGCTggggtg > 2:711503/1‑136 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:1624976/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:3882975/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:984609/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:3127825/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2970108/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:998199/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 2:1766407/1‑140 (MQ=255) tATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATAGCGTGAGCAAGCCAAGAAGCGGATGGTTTg > 1:2236895/1‑140 (MQ=255) tATTAAAAAAGGAATCAAGCCCCCTTCCAAACGACTCCGGGCGTGTCAGCTTTCCATCAGTCAACCGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTg < 2:2749677/140‑1 (MQ=255) ttCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCt > 1:3383384/1‑140 (MQ=255) aaaaaGTAATGAAGCTCCCTTCCAAACCACTCCTGGCGAGTCAGCTTTCCATCAGTAACACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGAt < 2:1087034/140‑1 (MQ=255) aGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATc > 1:1750366/1‑140 (MQ=255) cTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGa > 2:2701571/1‑140 (MQ=255) cTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGa > 2:2384157/1‑140 (MQ=255) cTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGa > 2:1646283/1‑140 (MQ=255) cccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAtt > 2:3411827/1‑140 (MQ=255) ccTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGAttt > 2:817542/1‑140 (MQ=255) ttCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTg > 1:3537123/1‑140 (MQ=255) ccAAAACACTCGGGGCGAGTCAGATTTCAATCAGCCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCg < 1:302012/140‑1 (MQ=255) | TAGGAGAACAACCCAAATGGATATCACGCCTTTTTTGAATAGAAATCTGGATATTCCGCTTTATCAGCAGCTTTATCGCTATTTCAAAGAAAACATGCATCAGGGGCGTATTCAAAAAGGAATGAAGCTCCCTTCCAAAAGACTCCTGGCGAGTCAGCTTTCCATCAGTCAAACGACTGTAGAACGTGCCTATGAACAGCTTGCTGCTGAGGGCTATATCGTGAGCAAGCCAAGAAGCGGATGGTTTGCTGATTATCATGATTCTGATTTTGCGTA > NZ_CP034943/548973‑549248 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |