BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,359	A→C	12.7%	T68P (ACC→CCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,359	0	A	C	12.7%	429.2 / 11.1	225	T68P (ACC→CCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (72/113); new base C (3/34); total (75/150)
Fisher's exact test for biased strand distribution p-value = 2.05e-04
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 226 total aligned reads displayed.

GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGG  >  NZ_CP034943/607221‑607498

   aCGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCTACGGGAGCGACAGGAGCTACCGGGGCAGCGGGACCAGCCGGACCACCCgg                                                                                                                                         >  2:1813307/1‑140 (MQ=18)

    cGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGa                                                                                                                                        >  1:1045448/1‑140 (MQ=255)

          ctccTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                                  <  2:416291/137‑1 (MQ=255)

          ctccTGGGGAACCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                                  <  2:2473759/137‑1 (MQ=255)

          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                                  <  2:577851/140‑1 (MQ=255)

                gggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGcc                                                                                                                            <  1:708294/140‑1 (MQ=255)

                  gAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCAc                                                                                                                          <  2:3455557/140‑1 (MQ=255)

                   aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCAcc                                                                                                                         >  2:1548861/1‑139 (MQ=255)

                   aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACg                                                                                                                         <  2:4054668/140‑1 (MQ=255)

                   aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACg                                                                                                                         <  2:2867385/140‑1 (MQ=255)

                     gCTGGACCTGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTCCCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       <  2:1690053/140‑1 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGCGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCCACcgg                                                                                                                       >  2:3153937/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGTGAAGCCTGACCAGCCCTACCAACCCAAGCGACGGGAGCCACgcc                                                                                                                       >  1:2450984/1‑138 (MQ=18)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       >  1:2591747/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACAGGAGCTACGGGAGCCACggg                                                                                                                       >  2:750420/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGAGAACCCGGACCACCCGGACCAACCGGagccacgggagccacggg                                                                                                                       >  2:2037065/1‑140 (MQ=21)

                       tGGCCCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                     <  1:1929483/140‑1 (MQ=255)

                       tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                     <  1:1505822/140‑1 (MQ=255)

                       tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                     <  1:1158206/140‑1 (MQ=255)

                         gaccagccggaccagccgGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCt                                                                                                                   <  2:2646097/140‑1 (MQ=255)

                          accagccggaccagccggAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTa                                                                                                                  <  1:317545/140‑1 (MQ=255)

                          accagccggaccagccggAGCGACGGGAGCCACCGGAGCTACCGCTGACTCTGTAACACAACGACCGACCCCAGCGACCTGAGCGACAGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGCCGGGCGCGCCGGGTGcgc                                                                                                                  >  1:2999947/1‑138 (MQ=12)

                             agccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACGGGAGCCACGGGAGCTCCCg                                                                                                               >  1:1644270/1‑140 (MQ=255)

                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGCAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                                                             <  2:3802504/140‑1 (MQ=255)

                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                                                             <  1:2834379/140‑1 (MQ=255)

                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCggg                                                                                                             >  1:4043678/1‑140 (MQ=255)

                                   accagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAag                                                                                                         <  2:165753/140‑1 (MQ=255)

                                       gccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgg                                                                                                     <  1:2627866/140‑1 (MQ=255)

                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGCGCGACGGGAGCCACGGGAGCTACCGGGGCagccgga                                                                                                    >  1:3293429/1‑140 (MQ=255)

                                            aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGCGCTCCCGGCGAcgccggaccag                                                                                                >  2:3375197/1‑140 (MQ=18)

                                            aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                                <  2:356937/140‑1 (MQ=255)

                                             gCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagc                                                                                               >  2:3982115/1‑140 (MQ=255)

                                              cGACCGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagcc                                                                                              <  1:926351/140‑1 (MQ=255)

                                                    gAGCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAgccggaccagccggacca                                                                                        <  1:2162563/140‑1 (MQ=255)

                                                    gAGCCACCGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCCACCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAgccggaccagccggacca                                                                                        <  1:1281082/140‑1 (MQ=255)

                                                     cgCCACGGGAGCGACCGGGGAAGCGGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                       <  1:3923889/139‑1 (MQ=255)

                                                     aGCCCCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGACCACCCGGCGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                       <  1:2673742/140‑1 (MQ=255)

                                                     aGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCaa                                                                                       <  1:4254633/140‑1 (MQ=255)

                                                         aCGGGAGCTACGGGGGAAGCTGGACCAGCCGGAGCGCCGGGAGCGACCGGAGCTACCGGGGCCGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                   <  2:107351/140‑1 (MQ=18)

                                                         aCGGGAGCTACCGGGGAAGCTGGACCTGCCGGAGCGACGGGAGCCAGAGGACCTCCCGTGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTAACGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                   <  2:728277/140‑1 (MQ=17)

                                                             gAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcg                                                                               <  2:3636339/140‑1 (MQ=255)

                                                              aGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCggagcga                                                                              >  2:51252/1‑140 (MQ=255)

                                                               gCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgac                                                                             <  1:2888089/140‑1 (MQ=255)

                                                                ctcccGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                            <  2:447992/137‑1 (MQ=255)

                                                                cTACCGGCGAAGCTGGACCACCCGGAGCCACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                            <  2:1276397/140‑1 (MQ=18)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGCAGCCGGACCAGCCGGACCGACCGGAGCGGCGGGAGCCACGGGAGCTACCGGGGGCGCCGGGCCAGCCGGACCAGCCGGagcctcaggcgccacggg                                                                 >  2:4101183/1‑140 (MQ=18)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                 <  2:3843678/140‑1 (MQ=255)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGTGAATCCGGACCAGCCGCAACAACCagagctccaggagcgactcg                                                                 >  1:2908166/1‑137 (MQ=17)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                 <  1:1778754/140‑1 (MQ=255)

                                                                             tGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                      >  1:3839138/1‑117 (MQ=255)

                                                                             cggACCCGCCGGAGCGACGGGAGCCACCGGAGCGACCGGCGCTGCCGGCCCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGcgacaggagcgacaggag                                                               <  2:2604747/139‑1 (MQ=14)

                                                                             cggACCAGCCGGCGCGACGGGAGCGACAGGAGCGACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                               <  2:186640/139‑1 (MQ=255)

                                                                             cggACCAGCCGGAGCCACCGGCGCCACCGGAGCGACCGGGGCAGCCGGACCACCCGTACGTACCGGAGCGACGGGAGCCACGGGATAGACCTGGTAAGTCGGACCAGGCGGACCAACCGGAGactcaggagcgacaggag                                                               <  2:1459919/139‑1 (MQ=12)

                                                                                cccAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                            <  2:45972/139‑1 (MQ=255)

                                                                                aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                            >  2:2270298/1‑140 (MQ=255)

                                                                                     ccGGAGCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCggg                                                       <  2:1045448/140‑1 (MQ=255)

                                                                                         cgCGACGGGTGGGTCTGGAGCTCCCGGGGACCCGGGCCCAGCCGGACCACCCGGAGCGCCGGGAGCCACGGGAGCTACCGGGGATGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                   <  1:1866179/139‑1 (MQ=14)

                                                                                              cGGGAGCCACAGGAGCCACCGGCGAAGCCGGACCAGCCGGACCACCCGGAGCGCCGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                              <  2:1217987/140‑1 (MQ=14)

                                                                                               gggAGCTACAGGAGCTACCGGGGATGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                             <  1:1086627/140‑1 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                             >  1:4234150/1‑140 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                              <  2:2959445/107‑1 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcga                                                                              >  1:2959445/1‑107 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCACCCGGGGAAGCCGCACCAGCGGGACCAACCGGAGCCACAGGAGCGACAGGCGATACCGGGGACGCCGGAc                                             >  1:657885/1‑140 (MQ=17)

                                                                                                      aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      <  2:2757415/140‑1 (MQ=255)

                                                                                                      aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      >  1:2267394/1‑140 (MQ=255)

                                                                                                        cggAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggag                                    <  2:2181732/139‑1 (MQ=255)

                                                                                                        aGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggag                                    <  2:2514382/140‑1 (MQ=255)

                                                                                                          gAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcg                                  <  1:112080/140‑1 (MQ=255)

                                                                                                             cgaCCGGGGCAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCGACCGGGGCAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaca                               <  2:3780630/138‑1 (MQ=17)

                                                                                                             ccaCCGGGGAAGCCGGACCACCCGGACCACCCGGAGCTTCGGGAGCCACGGGACCGACAGGGGCACCCGGAGGAGCCGGAACACCCGGAGCGAGAGTAGCGACAGGAGCTACCGGGGATGCCGGCCCAGCCggcgcgaca                               <  2:2624498/138‑1 (MQ=12)

                                                                                                               tgcGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  1:55446/138‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGAGCTACCGGAGCGACGGGAGCCACTGGAGCTACCGGGGAAGCGGTACCACACGGACCCACGGGAGCTACATAAGGCACAGTGGCCGCCGGCGAAGACCGACCAGCCggagcgacggg                             >  2:2356635/1‑140 (MQ=9)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  1:1595723/140‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCCACGGGAGCAACCGGGGAAGCCGGACCAGCAGGACCAACCGGAGCGACACGAGCGACAGGAGAGACCGGGGAAGCCGCACCCTCCggagcggctcg                             >  1:3789973/1‑135 (MQ=14)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGGGCTACGGGGGAAGCGGGACCACCGGGGCCGAGCGGGGCGACAGTAGCGCGGGGAGAGTCGGTGGACGCCGGAGCAGCCggagcgacagg                             >  2:2188697/1‑140 (MQ=9)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTTCCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  1:2658342/140‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                             >  2:3004342/1‑124 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  1:279322/134‑1 (MQ=255)

                                                                                                                      atgccggaccagccggaccaCCCGGAGAGAGGGGCGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgaca                      <  1:3642720/138‑1 (MQ=17)

                                                                                                                       agccggaccagccggaccAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacag                     >  1:4143911/1‑140 (MQ=255)

                                                                                                                        tccggaccagccggcccaCCCGGAGCGACGGGAGCCACGGGAGCGACGGGGGATGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                    <  2:3327418/139‑1 (MQ=17)

                                                                                                                          cggaccagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                  <  1:2339940/140‑1 (MQ=255)

                                                                                                                          cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                  >  2:3857095/1‑140 (MQ=255)

                                                                                                                          ccgcccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                  <  2:3492455/136‑1 (MQ=255)

                                                                                                                              ccagccggaccaCCCGTAGCGACGGGAGCCACGGGCGCTACCGGGGACGCCGGACCAGCCGGACCACCCGTCGCGACAGGCGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  1:1848805/140‑1 (MQ=17)

                                                                                                                              ccagccggaccaACCGGCCCCACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  2:1299247/140‑1 (MQ=17)

                                                                                                                              ccagccggaccaACCGGAGCTACGGGACCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  1:3446900/140‑1 (MQ=255)

                                                                                                                              ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  1:311163/140‑1 (MQ=255)

                                                                                                                               aacccgcaccaTCCGGAGGTACGGGATCCTGGGGAGCTACGGGGGAAGCCGGACACGCCGGACCACCCGGAGCGACTGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgaca             <  1:2416341/137‑1 (MQ=17)

                                                                                                                                 gccggacccCCCGGAGCGCCGGGCCCACCGGGAGCTACCGGGGAAGCCGGACCACCCGGACCAACCGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg           <  1:2184482/140‑1 (MQ=14)

                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCAACCGGAGCGACAGGAGCCACAGGAGCTAGGGGCGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgagagga          >  2:1736954/1‑140 (MQ=17)

                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCGACCGGGGAAGCCGGCCCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga          <  1:49646/140‑1 (MQ=255)

                                                                                                                                     gaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCt       <  1:3871820/140‑1 (MQ=255)

                                                                                                                                     gaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCt       <  1:750420/140‑1 (MQ=255)

                                                                                                                                     caccaACCGCAGCCCCGGGAGCCACGCGAGCTCCGGGGGACGCCGGACCCGCCGGACCAACGGGAGCGACAGCAGCGACTGGCGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCt       <  1:2470399/139‑1 (MQ=17)

                                                                                                                                      accaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa      >  1:477931/1‑140 (MQ=255)

                                                                                                                                       ccaTCCGCACCGACGCGAGCCACGCCACCTACCGTGGAAGCCGGACCCGCCGGACCATCCGTAGCGCCAGCAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCCAc     <  1:3077446/140‑1 (MQ=17)

                                                                                                                                       ccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga          >  1:78401/1‑135 (MQ=255)

                                                                                                                                       ccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga          <  2:78401/135‑1 (MQ=255)

                                                                                                                                          aCCGGAGCGACGGGAGCCCCGGGAGCTACCGGGGCAGCCGGACCAGCCGGACCCCCCGGAGCGACCGGCGCGACCGGAGCTACCGGGGAAGCCGCACCAGCGGGAGCGCCCGGAGCGGCAGGCGCGGCCGGCGCGACCgg  >  2:199711/1‑140 (MQ=14)

GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGG  >  NZ_CP034943/607221‑607498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`