| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 2,139,480 | A→C | 8.0% | A119A (GCT→GCG) | deoD ← | purine‑nucleoside phosphorylase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 2,139,480 | 0 | A | C | 8.0% | 716.9 / 8.1 | 289 | A119A (GCT→GCG) | deoD | purine‑nucleoside phosphorylase |
| Reads supporting (aligned to +/- strand): ref base A (187/65); new base C (2/35); total (189/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.68e-16 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 289 total aligned reads displayed.
TGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGTAGCTTTGAATTAATTC > NZ_CP034943/2139343‑2139614 | cGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGCCATCATCGGCATTTTTTAAAAGCTCGAAATCGGCGCACGGCGCAAAAACAATACTTCCCAACGCGa < 2:525511/140‑1 (MQ=255) aaTCGTGTTTTTAGAACTGATCAGCTGTAAATAGGCTTCCGACCGTCACCGGCACGCTTTTATCCTTGGCGGAATCATTGGAATTTTTTAAAAGCTCGAAATCTGGGAATGGCGCAAAATCACTAGTTCCGAAAGCGAct < 2:1417368/140‑1 (MQ=255) aaTCGTGGTTTTATAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCATTTATCCTTTGCGGCATAATAGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAAACAATACTTCCGAACGCGAct < 2:1913619/140‑1 (MQ=255) cgtcgtTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTg > 2:1532574/1‑140 (MQ=255) tgtttttAGAACTTATCAGCTTTAAATACGCTTCCTCCCGTCCCGGGCACGCCTTTATCCTTTGCGGAAACATAGTAATTTTTTAAAAGCTCCAAATCGGCCCAAGGCCAAAAATCAATACTCCCCAAAGCGACTCTGtt < 1:3198966/134‑1 (MQ=255) cgtTGTAGACATGATCAGGCGGAAATACGCGACCTACCGTCACGGGCACGCGTTTATCGTTGGCGGAATCATAGGCATTTTTTAAAAGCTCGAACTCTGGGCAAGGCGCAAAATCAAGCGTTCCGAACGCGACTCTGTTc < 2:3257272/140‑1 (MQ=255) cTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTGCGAAAGCGACTCTGTTCATTTGTGaa < 2:3593587/139‑1 (MQ=255) aTCAGCTGTAAATACGGTTCCTACCGTCACCGGCACGCCGTTATCCTTTGCGGCATCATAGGCATTGTTTAACAGCTCGCAATCTGCGCAAGGCGCAAAATCAATACGTCCGAAAGCGACTCTGTTCATTTGTGACTCAg > 2:1471001/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:712307/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:385889/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:1640401/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:2864899/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:3093393/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 2:1616642/1‑140 (MQ=255) aTCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAg > 1:2073522/1‑140 (MQ=255) gCTTTAAATAGGCTTCCTACCGTCACCGGCACGCTTTTATCCTTTGCGGCATAATAGGAATTTTTTAAAAGCACCAAATCTGCGCAAGGCCAAAAAAAAATCATCCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGa < 1:3963558/140‑1 (MQ=255) ttaaaaTACGCTTCCTACCGTCCCGGGCACGCCTTTAGCCTTGGCGCAAACATCGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTCCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 1:3287452/137‑1 (MQ=255) tgaaaaTCCGCTGCCTACCGTCACCGGCACGCCTTGATCCTTTCCGGCATCATCCGCATTTTTTAAAAGCTCGAAATCTGCGCACGGCGAAAAAACAATACTTCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 1:1980959/137‑1 (MQ=255) tGTAAATCCGCTTCCTACCGTCACGGGCACGCTTTTATCGTTTGCGGCATCATCGGATTTTTTTAAAAGCTCGAAATCTGCGCACGGCCAAAAATCAATACTTCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 1:2323438/140‑1 (MQ=255) tGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATAAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 2:3298969/140‑1 (MQ=255) tGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 2:4089121/140‑1 (MQ=255) tGTAAATACGCTTCCTACCGTCACCGGCACGCATTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAAACTGCGCACGGCGAAAAACCAATACTGCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 2:2215603/140‑1 (MQ=255) tGTAAATACGCTCCCTACCGCCCCCGGCACGCCTTTATCCTTGGCGCCATCATAGGAATTTTTTAAAAGCTCGAAATCTGCGAAAGGCGAAAAATCAATACTGCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAgg < 1:2901379/140‑1 (MQ=255) tAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAATAGCTCGAGATCTGCGCAAGGCGCAATATCCATACTTCCGAACGCGACTCTGTTCATGTGTGATTCAGTTGAGGAt > 1:4215137/1‑140 (MQ=255) aaTACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGTATCAGTTGAGGATGt > 1:3157550/1‑140 (MQ=255) aaTACGCTTCCTACCGTCACCCGCACGCCTTTATCCTTTCCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCAGTTGTGAATCAGTTGAGGATgg > 1:2206868/1‑139 (MQ=255) aTACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAATAAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTc < 2:516063/140‑1 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCTTAGGGATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:2444680/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:1175089/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:2524255/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:4041298/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 2:3578096/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:3484432/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:1818588/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAg > 1:277938/1‑140 (MQ=255) gCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCAGTTGTGAATCAGTTGAGGATGTCATAg > 1:934432/1‑140 (MQ=255) cTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGc > 2:1526050/1‑140 (MQ=255) tCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCa > 1:1542174/1‑140 (MQ=255) tCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCa > 2:3471347/1‑140 (MQ=255) tCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCa > 1:1901478/1‑140 (MQ=255) tCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCAGTTGTGAATCAGTTGAGGATGTCATAGCCa > 2:2041224/1‑140 (MQ=255) ccTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCaa > 2:3955528/1‑140 (MQ=255) ccTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGGTCATTTGTGAATCAGTTGAGGATGTCATAGCCaa > 2:1571983/1‑140 (MQ=255) ccTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTGTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCaa > 2:26825/1‑140 (MQ=255) cTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCaaa > 2:3366585/1‑140 (MQ=255) ccGTCACCGGCACGCCTTGATCCTTTGCGGCAACATAGGCATTTTTTAAAAGCACGAAAGCTGCCAAAGGCGCAAAATCAATACTCCCGACCGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATg < 2:2668400/140‑1 (MQ=255) ccGCCACCGGCACGCCTTTATCCTTTGCGCCATCATAGGAATTTTTTAAAAGCTCGAAATCGCCGCAAGGCGAAAAATCAATACTACCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATg < 1:3249804/140‑1 (MQ=255) tCACCGGCAGGCGTTTATCCTTTGCGGCATCATAGGGATTTTTTAAATGGTGGAAATCTGCGCAAGGCGCAAATTCAAGCCTGCCGACAGCGACTGTGTTCATTGGTGACTCTGTTGAGGATGGGATAGGCTAATTGagg > 2:1085092/1‑138 (MQ=255) tCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACg > 2:4160636/1‑140 (MQ=255) ggCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCg < 2:2383624/140‑1 (MQ=255) ggCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCGGCGCAAGGCGCAAAATCAATACGTCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCg < 2:260420/140‑1 (MQ=255) tATCCTTTGCGGCATAATAGGAATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATCCTGCCTAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACa < 2:1290422/140‑1 (MQ=255) cTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCAGTTGTGACTCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACCTCtt > 1:546640/1‑140 (MQ=255) tttCCGGCATCATCGGCATTTTTTAAAAGCTCGAAATCTGCGCATGGCGAAAAATCAATACTTCCCAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCttt < 1:68764/140‑1 (MQ=255) ttGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTg > 1:2615514/1‑140 (MQ=255) ttGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTg > 1:1611019/1‑140 (MQ=255) ttctccatcatAGGCATATTTTAAAAACTCTAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCTACTCTGTTAATTTTTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:383600/6‑140 (MQ=255) ttctccatcagAGGCATATTTTAAAATCTCTAAATCTGCGCAAGGAGCAAAATCAATACTTACTAAAGCTAATCTGTTAATTTGTGAATCAGTTGAGTATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:253150/6‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCTACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGAAGTCCCGCACTTTGACATCTTTGc > 1:2730313/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGACTCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:3241150/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCg < 2:316114/123‑1 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:2721793/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4116528/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:1038923/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:1708377/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:504842/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:466556/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:112166/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:4020907/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:1197072/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:1361069/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:3643680/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:1445556/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:3023275/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 1:2284626/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCGGTTCAGTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCCCTTTGACATCTTTGc > 2:3906755/1‑140 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGAGCAAGGCGCAAAATCAATACTTCAGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCttttc > 1:2447493/1‑138 (MQ=255) tGCGGCATCATAGGCATTTTTTAAAAGCTAGAAATCTGCGCAAGGCGCAAAATCAATAATTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGc > 2:2095079/1‑140 (MQ=255) cGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCgg > 2:2202665/1‑140 (MQ=255) cGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCGGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCgg > 2:3680920/1‑140 (MQ=255) gaaTTTTTAAAAAGCTCTAAATCTGCGCAAGCCGCAAAATCAATCCTACCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 2:4215137/138‑1 (MQ=255) gCATTTTTTAAACGCTCTAAATCGGCGCACGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 1:384882/140‑1 (MQ=255) gCATTTTTTAAACCCTCCAAATCTGCGCAAGGCGCAAAAGCAATACTGCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCa < 1:2343869/140‑1 (MQ=255) tttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGaa > 2:4137539/1‑140 (MQ=255) tttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGaa > 2:828635/1‑140 (MQ=255) tttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGaa > 1:3744590/1‑140 (MQ=255) ttttAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAGAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAgcgc < 1:3360652/131‑1 (MQ=255) ttttAAAAGCTCGAAATCTGCGCAAGGCGAAAAATAAATACTCCCCAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAAc < 2:493840/140‑1 (MQ=255) aacaaGCTCCAAATATGCGCACGGCCCAAAATCAAGCCTTCCTAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTa < 1:2484665/137‑1 (MQ=255) aaaGCTCGAAATCTGCGCAAGGCGAAAAATCAATACTTCCGAACGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTAct < 2:2737370/140‑1 (MQ=255) tGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGAtttt > 2:362459/1‑140 (MQ=255) tGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGAtttt > 2:1848544/1‑140 (MQ=255) tGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGAtttt > 1:1567435/1‑140 (MQ=255) gcgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTg > 1:359360/1‑140 (MQ=255) gcgcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTg > 1:1043946/1‑140 (MQ=255) gcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGca < 2:3093393/140‑1 (MQ=255) gcAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGca < 2:3065736/140‑1 (MQ=255) gcAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGTa > 1:664279/1‑140 (MQ=255) aaTCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGTAGCtt < 2:466556/140‑1 (MQ=255) ccGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGTAGCTTTGAATTAattc > 1:2014476/1‑140 (MQ=255) | TGCGAATCGTCGTTGTAGAACTGATCAGCTGTAAATACGCTTCCTACCGTCACCGGCACGCCTTTATCCTTTGCGGCATCATAGGCATTTTTTAAAAGCTCGAAATCTGCGCAAGGCGCAAAATCAATACTTCCGAAAGCGACTCTGTTCATTTGTGAATCAGTTGAGGATGTCATAGCCAAAATGACGTCCCGCACTTTGACATCTTTGCGGATAGCGCCGCAAGAACCTACTCTTATTAGATTTTGCACATCGTAGCTTTGAATTAATTC > NZ_CP034943/2139343‑2139614 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |