| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,184,726 | A→C | 5.3% | intergenic (+22/+15) | mdtP → / ← EO946_RS16485 | multidrug efflux MFS transporter MdtP/tautomerase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,184,726 | 0 | A | C | 5.3% | 660.2 / 3.1 | 274 | intergenic (+22/+15) | mdtP/EO946_RS16485 | multidrug efflux MFS transporter MdtP/tautomerase family protein |
| Reads supporting (aligned to +/- strand): ref base A (133/116); new base C (20/5); total (153/121) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.12e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 295 total aligned reads displayed.
TATCGCGGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGATTGAGC > NZ_CP034943/3184587‑3184865 | tATCGCGGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCaa > 1:1484396/1‑140 (MQ=255)tATCGCGGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCaa > 1:1457906/1‑140 (MQ=255) tgggTCGGAGCCGTATTTACTTTGTTATTAAAACCTATAAAACTATGAAACAAGAAAACGGGAGAACAAGTAAAAGAGTATTGGTCACAAGCCTTTGAATCACCTTCACACTAATAGACCAACCAGCGGGTATCACTcag < 2:2019274/138‑3 (MQ=255) gcgGTCGGAGGCGTATTTACTTTTTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCcg < 1:3999179/140‑1 (MQ=255) gcgGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCcg < 1:3732302/140‑1 (MQ=255) cgGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCcgc > 2:819288/1‑140 (MQ=255) ggTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAACCCAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACACGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCcgcg < 2:2630553/140‑1 (MQ=255) gTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTCTCACTCCGCgg > 2:1699281/1‑140 (MQ=255) gTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCACTCCGCgg > 2:4171111/1‑140 (MQ=255) gTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCgg > 2:2097311/1‑140 (MQ=255) gTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGATGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAAACCGCgg > 1:871121/1‑140 (MQ=255) cGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAACCAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCgggg < 1:3634912/140‑1 (MQ=255) ccGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTtta < 1:3590163/140‑1 (MQ=255) tATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTttatta < 2:230461/140‑1 (MQ=255) tATTTACTTTGGTCTTAAAACCTATCAAACTATCATACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACACGCCGTTGAATCTCCTTCCCAGTAATAGCCCACCCCGCGGGTCTCCCTCCGGGGGGTGgtatta > 2:1582636/1‑140 (MQ=255) aTTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTGTtattat > 1:609502/1‑140 (MQ=255) aTTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCGTCCCATTAAGAGACCACCCCGCGGGTATCAATCCGCGGGGTTTtattat > 1:1045582/1‑140 (MQ=255) tACTTTGTTCTTAACAACTATCAACCTATCAAACTAGAAAACGGGAGAACATGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCTCGGGTATCAATACGCGGGGTTTTATTATTCa < 1:4197373/140‑1 (MQ=255) tACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCa < 2:2679150/140‑1 (MQ=255) aCTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCaa > 2:138641/1‑140 (MQ=255) aCTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCaa < 1:1236513/140‑1 (MQ=255) ttGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATAACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatca > 2:3444452/1‑140 (MQ=255) tGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCCATCCGCGGGGTTTTATTATTCAatcat > 1:424566/1‑140 (MQ=255) tGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatcat < 2:1282270/140‑1 (MQ=255) tGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatcat > 2:1140690/1‑140 (MQ=255) tGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACATTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatcat > 2:4000497/1‑140 (MQ=255) gTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatcatc > 2:3870389/1‑140 (MQ=255) gTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAatcatc > 1:2440368/1‑140 (MQ=255) ttCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCt > 1:3129619/1‑140 (MQ=255) tCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCACTCCGCGGGGTTTTATTATTCAATCATCTg < 2:1973259/140‑1 (MQ=255) tgaaaaCCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCCCCCCGCGGGTATCAAGCCGCGGGGTTTTATTATTCAATCATCTggg < 2:4067115/138‑1 (MQ=255) tcaaactatcaaacAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCAtt > 1:938419/1‑140 (MQ=255) atcaaacAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGaaa < 1:3317816/140‑1 (MQ=255) aaacAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGAc < 1:681550/140‑1 (MQ=255) aaacAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGAc > 1:1783744/1‑140 (MQ=255) aacAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCGTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGATTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGAcc < 1:2813217/140‑1 (MQ=255) gAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATcc > 2:3321318/1‑140 (MQ=255) aaaaCGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCt < 1:3691275/140‑1 (MQ=255) cGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATc < 2:804904/140‑1 (MQ=255) ggAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCGTCCATTACCGCCCGACCAATCCTCATCCt < 2:901214/140‑1 (MQ=255) aaCAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCCATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGAtt > 2:548947/1‑140 (MQ=255) aaCAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCCTCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGAtt > 2:3424057/1‑140 (MQ=255) tAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCAATTAAATTTACTATATAACAATTCTCATACTGAtttagtgg < 2:3135578/140‑6 (MQ=255) atagaAACAGGCACAAGGCGTTGAATCAACTTCCCATTAATAGACCACCACTCGGGTATCAATCCTCGGGTTTTTATTATTCAATCATCTGGGCCCGTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGc < 2:2511412/138‑1 (MQ=255) agagAAAGCGGCACAATCCGTTGAATCACCTTCCCCTTAATACACCACCCCGCGGGTATCACTCCGCGCGGTTATATTATTCACTCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGc < 1:2090384/140‑1 (MQ=255) agagAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGc < 2:1738574/140‑1 (MQ=255) agagAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCGTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGc < 2:393809/140‑1 (MQ=255) agagAAAGCGGCACAAGCCGTTGAATCACCGTCCCATTAAGAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGc < 1:1699281/140‑1 (MQ=255) aaGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCACTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGAt > 1:3032841/1‑140 (MQ=255) aaGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGAt > 1:1612343/1‑140 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGttt < 1:3192659/68‑1 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGttt > 2:859353/1‑68 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGttt > 2:3192659/1‑68 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATa < 1:3166518/140‑1 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATa > 1:1554534/1‑140 (MQ=255) aGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCAGCCTGATTGCCGGCCAGCATGaga > 1:2170539/1‑138 (MQ=255) gCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATGTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAaca < 2:3125463/140‑1 (MQ=255) cacaAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGa < 1:3867277/97‑1 (MQ=255) cacaAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAacac < 1:1141522/140‑1 (MQ=255) cacaAGCCGTTGAATCAACTTCCCATTAATAGACCACCCCGAGGTTATCAATCAGAGGGTTATTATTATTCAATCATCTGAGCCCTTACATTTCCGAAAGACCAATCCTCATCCTGATTTCCTGCCATCATGATAAacac < 2:177916/140‑1 (MQ=255) acaAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAACGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAAcaca < 1:2951806/140‑1 (MQ=255) tGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCAGCCTGATTTCCGGCCAGCATGATAAACACATCttctttt > 1:2876807/1‑140 (MQ=255) aTCACCTTCCCATTAATAGACCACCCCGCGGGTATCACTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCttcttttctt > 1:1447682/1‑140 (MQ=255) aTCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCttcttttctt < 1:138641/140‑1 (MQ=255) aTCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCAGATTTCCGGCCAGCATGATAAACACATCttcttttctt > 2:3843260/1‑140 (MQ=255) ccTTCCCATTAATAGACCACCCCGCGGGTCTCACTCCGCGGGGTTTTATTATTCAATCATCTCGGCCCTTCCATTTCCGAATGACCAATCCTCATACTGATTTCCGGCCAGCATCATAAGAACATCATCTTTTCTTACGc > 2:2474032/1‑140 (MQ=255) ccTTCCCATTAATAGACCACCCCGCGGGTATCACTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTGTCTTACGc > 1:4146571/1‑140 (MQ=255) ccTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGc < 1:2317802/140‑1 (MQ=255) ccTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTATTAAGc > 1:3963536/1‑140 (MQ=255) cTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGcc < 2:3032841/140‑1 (MQ=255) cATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATGATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCt < 2:2605130/140‑1 (MQ=255) cATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCt < 1:2217855/140‑1 (MQ=255) aTAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCg < 1:2580070/68‑1 (MQ=255) aTAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGAc < 2:4021473/74‑1 (MQ=255) aTAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGgaa > 1:1846340/1‑140 (MQ=255) accaccCCGCGGGTCTCCAGCCGCGGGGTGTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAAGCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCGTCTTTTCTTACGCCACGCTCGgactgaa > 1:3918590/1‑140 (MQ=255) accaccCCGCGGGTATCCATCCGCGGGGTTTTATTATTCAAGCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGgaatgaa > 2:1500667/1‑140 (MQ=255) accaccCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGgaatgaa > 1:896091/1‑140 (MQ=255) accaccCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGACCTTCCATTTCAGAAAGACCAATCCTCATCCTGATTTCCGGCGAGCATGATAAACTCATCTTCTTTTCTTACGCCAAGCTCGgaatgta > 2:2976355/1‑138 (MQ=255) accaccCCGCGGGTATCAATCAGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTAAGCCAAGCTCGgaatgaa > 1:2378062/1‑140 (MQ=255) accacaCCGCGAGTATCACTCCCCGGGGTATTATAATTCAAAAATCAGGGCCCTTCCATTTCAGAAAGACAAATACTCATCCTGATATCCGGCCAGCTTGATAAAAACATATTCTTTTCTTACGCCAAGCTCGgaatgaa > 2:96916/1‑140 (MQ=255) ccccGCGGGTATCCATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCCAGCCTCATCCTGATTTCCGGCCAGCATGATAAACACAGCTTCTGTTCTTCCGCCAAGGTCGGAATGAATCCg > 2:2848676/1‑140 (MQ=255) ccccGCGGGTATCACTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCg > 1:1669821/1‑140 (MQ=255) ccccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGTTAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCg > 2:2727149/1‑140 (MQ=255) ccccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCg > 2:3603318/1‑140 (MQ=255) ccccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCg > 2:717615/1‑140 (MQ=255) ccccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCg > 1:2718062/1‑140 (MQ=255) ccccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCGTCCATTTCCGAAAGACCCATCCTCATCCTGATTTCCGGCCAGCCTGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGACTCCg > 1:487336/1‑140 (MQ=255) cccGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCgg > 1:3487704/1‑140 (MQ=255) cccGCGGGTAACAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCATTCCCTTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTGCTTTGCGTCCGCCACTCTCGGAATGAATCCgg > 2:777575/1‑140 (MQ=255) cgcgGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCCGCATGATAAACACAACTTCGTTTCTTACGCCAAGCTCGGAATGAATCCGGCt > 1:4091984/1‑140 (MQ=255) gTATCCCTCCGCGGGGCTTTATTATTCAAGCATCTGGGCCCGTCCAGTTCCGAAACACCAATCCTCAGCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCACGCTCGGAATGAATCCGGCTTGCGa < 1:2258438/140‑1 (MQ=255) gTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGa < 1:2126643/140‑1 (MQ=255) aTCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGAtt < 1:565154/140‑1 (MQ=255) aTCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGAtt < 2:129967/140‑1 (MQ=255) aTCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGAtt < 1:1954365/140‑1 (MQ=255) taTCCGCGGGGTTTTTTTATTCAATCATCTGGGCCCTTCCATGTCCGAAAGCCCAATCCTCAGCCTGATTTCCGGCCAGCATGATACACACATCTTCTTTTCTTACGCCAAGGTCGGAATGAATCCGGCTTGCGATTGAg < 2:3716952/139‑1 (MQ=255) aaTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGATTGAg < 1:84501/140‑1 (MQ=255) aaTCCGCGGGGTTTTATTATTCAATCATCTGGGCCCGTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGATTGAg < 1:1007748/140‑1 (MQ=255) aaTCCGCGGGGTTATATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGATTGAg < 2:485514/140‑1 (MQ=255) | TATCGCGGTCGGAGCCGTATTTACTTTGTTCTTAAAACCTATCAAACTATCAAACAAGAAAACGGGAGAACAAGTAAAAGAGAAAGCGGCACAAGCCGTTGAATCACCTTCCCATTAATAGACCACCCCGCGGGTATCAATCCGCGGGGTTTTATTATTCAATCATCTGGGCCCTTCCATTTCCGAAAGACCAATCCTCATCCTGATTTCCGGCCAGCATGATAAACACATCTTCTTTTCTTACGCCAAGCTCGGAATGAATCCGGCTTGCGATTGAGC > NZ_CP034943/3184587‑3184865 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |