| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,200,979 | G→T | 7.3% | G200* (GGA→TGA) | EO946_RS16570 → | spore germination protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,200,979 | 0 | G | T | 7.3% | 441.5 / 3.1 | 203 | G200* (GGA→TGA) | EO946_RS16570 | spore germination protein |
| Reads supporting (aligned to +/- strand): ref base G (78/102); new base T (21/2); total (99/104) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.97e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 209 total aligned reads displayed.
AACGATAACGATTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCC > NZ_CP034943/3200840‑3201118 | aacgataacgatTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAg < 1:1330962/140‑1 (MQ=255)aacgataacgatTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAg < 1:1003252/140‑1 (MQ=255) cgataacgatTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTGCATCTCTTTTTTAGGa > 2:719740/1‑140 (MQ=255) cgataacgatTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGGTTTAGGTGAAGGTCTTGGACACATTGCTAACTCTCTTACTGTCGTTTCCCTCTCTTTTTTAGGa > 2:4041325/1‑140 (MQ=255) taacgatTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATg < 1:2747936/140‑1 (MQ=255) attattattTGTCTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCTCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGt < 2:2443419/140‑1 (MQ=255) ttACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGtt < 2:2642561/140‑1 (MQ=255) cTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATATGTTTTTTAGGAATTGAAGTGATTGTGtttat > 1:3646022/1‑138 (MQ=255) aTTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATGAATGGAAGTGATGCTGTTTCTTcc > 2:3139285/1‑140 (MQ=255) aTTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTTATGCTGTTTATTcc > 1:2402637/1‑140 (MQ=255) aTTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAACTGATGCTGTTTATTcc > 2:3213337/1‑140 (MQ=255) tgtgTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATGGGTTTTTTAGGAATGGAACTGATGCTGTTTCTTCCTg > 1:3513023/1‑140 (MQ=255) tgtgTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTACTg > 1:789023/1‑140 (MQ=255) tgtgTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAAAGGAAGTGATGCTGTTTATTACTg > 1:2917545/1‑140 (MQ=255) tgtgTTTGGGATCAGTATTAAAATTAGTGACATCAATCATGTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCGAGTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTg < 1:2363960/140‑1 (MQ=255) ggATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTTATGCTTTTTATTCCTGAACATATg > 2:2516775/1‑140 (MQ=255) ggATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCGTTTTTATGAATGGAAGTGATGCTGTTTGTTCCTGAACATATg > 1:400935/1‑140 (MQ=255) gTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGaagaaa < 2:2789351/140‑1 (MQ=255) agttttGACATCAATAATTTGCGCCCTGATTTAGGTGAAGGTCTTTGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTATTAATGGAAGTGATTCTGTTTCTTCCTGAACATATCTAGAAAATGAAATa < 2:2035729/138‑1 (MQ=255) aTTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATa < 2:232655/140‑1 (MQ=255) aTTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATa < 1:1569555/140‑1 (MQ=255) tttttGCCATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCAGTGCTAACTCTCTGACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATac < 2:1226428/140‑1 (MQ=255) ttGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATAcaca < 1:686430/140‑1 (MQ=255) gACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAtt < 2:2783638/140‑1 (MQ=255) gACATCAATAAGTTGCGCCCTGTTTTCGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAtt < 2:426882/140‑1 (MQ=255) aCATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTc < 2:1561561/140‑1 (MQ=255) aCATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACACATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTc < 2:2473788/140‑1 (MQ=255) aTCAATAATTTGCTCACTGTTTTATGTGAAGGTCTTGGAACCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAg < 2:2396021/140‑1 (MQ=255) aTCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAg < 2:2900308/140‑1 (MQ=255) aTCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAg < 2:3802065/140‑1 (MQ=255) aataatTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGata < 2:883523/140‑1 (MQ=255) taatTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATg < 2:4233439/140‑1 (MQ=255) taatTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATg < 2:3093799/140‑1 (MQ=255) tGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATATCTTTTTTATGAAATGAAGTGATTCTGTTTGTTACTGAACAAAAGAAAAAAAAAAAAAACACAATCACATATTAGGCt > 1:3304496/1‑140 (MQ=255) cgcCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGt < 1:1552295/140‑1 (MQ=255) ccTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCgg < 1:4266052/140‑1 (MQ=255) aggTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGc < 1:3618328/138‑1 (MQ=255) aggTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGc < 1:2015084/138‑1 (MQ=255) gTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAAAATATGAAGAAAAAGAAATACACATTCATATATTAGGCTGTAGGGtt > 2:1727825/1‑140 (MQ=255) ttttAGGTGAGGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTttcttc < 1:1256649/87‑1 (MQ=255) ttttAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCAACTCTTTTTTATGAATTGAAGTTATGCTGTTTGTTACTGAACAAATGAAGAAAAATAAAAAAACAATCATATATGCGGCTGTCGGCgtt > 1:1724647/1‑140 (MQ=255) gAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTACATCTCGTTTTTAGGAAAGGAAGTGATTCTGTTTATTCCTGAACAAATGAATAAAAAGAAAAAAACAATCAGATATTCGGCTGTAGGCGTTATGAttac > 1:57245/1‑138 (MQ=255) aaGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTATTACAGAAAATATTAAGAAAAATAAATAAAAAATAAGATATTCGGCTGTCGGCGTTCTGATTACg > 1:2792675/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATGTCTTTTTTAGGAATGGAAGTGATGCTGTTTCGTCCTGAACATATGAAGAAAAAGAAATACACAGTCAGATATGCGGCTGTCGGCTTTGTGTTTGCGa > 2:187703/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATGGCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACCTATGAAGAAAAAGAAATACAAATTCAGATATGGGGCTGTGGGGTTTCTGATTGCGa > 2:1424482/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTTCACAAATGAAGAAAAAGAAATACACATTGAGATATTCGGCTGTGGGCTTTGTGATTGCGa > 1:3131068/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTTTCGGCTTTATGATTACGa > 2:3406298/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa > 2:537964/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:112954/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 2:3603214/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:2081760/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGa < 1:1385462/140‑1 (MQ=255) aGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGAAGCAGTTTATTCCTTAACATATGAAGAAAAATAAATAAAAATTCAGATATGCGGCTGTCGGCTGTCTGATTCCGa > 2:194208/1‑140 (MQ=255) aGGTCTTGGACCCATTGCTAACACTCTTACTGTCGTTTGGATCTGTTTTTTAGGTAAGGTCGTGATGCTGTTTGTTGCGGAACAGATGAAGCAAAAGAAATACAGATTCAGATATGCGGCTGTCGGCTGTGTGATTGCgg > 2:1264263/1‑139 (MQ=255) aGGTCGTGGACCCATTGCTAACTCTCTTACTGTCGGTTCCATCTCTTTTTGAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATAGGCGGCTGTCGGCTTTCTGATTCCGa < 2:4071047/140‑1 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 2:600282/140‑1 (MQ=255) cTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGattat < 2:337603/140‑1 (MQ=255) ggACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTGTTTTTTAGGAATGTAAGTGATGCGGTTTCTTCCTGAACATATGAAGAAAAAGAAATACAAATTAAGAGATGCGGCTGTGGGCTTTCTGATTCCGATTAtttt > 2:3190901/1‑140 (MQ=255) ggACCCATTGCTAACTCTCTTACTGTCGTGTCCATCTCTTTTTTAGGAAAGGAACTTATGCGGTTTCTTCCGGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGGTTTGTGATTCCGATTAtttt > 2:3640390/1‑140 (MQ=255) gACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTta < 1:1989690/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 2:260013/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 2:1360676/140‑1 (MQ=255) aCCCATTGCTAACTCTCTTACTGTCGTTTCAATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCAGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTtat < 1:2063141/140‑1 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCCACTATTTTTTTGGTATGGTAGTGATGCGTTTTCTTGCAAAACATATTAAAAAAAAAAAATAAACAATAACAAATTAGGCTGTCGCCTTTCTGAATGCCATTATTTTataaat > 1:1045634/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTGTTTTTTATGAATGGAAGCGATGCTGTTTGTTCCTGAAAATATGAATAAAAATAAATACACATTAAGATATTCGGCTGTCGGGGTTGTGATTACGATTATGTTatatat > 1:453146/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:1005468/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAAAATATGAATAAAAAGAAATAAACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTatatat > 2:2073863/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTACCTCTATTTTTTAGGAATGGAACTGATGCTGTTTCTTCCGGTACATATGCAGAAAAAAAAATACACATTCCGTAATGCGGCTGGCGGGGTTCTGATTCCGCTTATTTTatatat > 1:2341342/1‑140 (MQ=255) aTTGCTAACTCTCTTACTGTCGTTTACATGTATTTTTTAGGAATTGAAGTGAAGCGGTTTCTTGCTGAAAATATGAAGAAAAACAAATACACAATCACGTATGGGGCTGTCGGGTTTGTGAATCCGATTATTTTatatat > 2:569579/1‑140 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:2661207/140‑1 (MQ=255) ttGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:3709500/140‑1 (MQ=255) agacagaCTCTCTTACTGTCGTGTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATc < 2:2959620/134‑1 (MQ=255) aCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTGTTCCTGAACATATGTAGAAAAAGAAATACACATTCAGATATTCGGCGGTCGGGGTTGTGGTTGCGGTTATTTTATATATCCTGACa > 1:3726727/1‑140 (MQ=255) aCTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACa < 2:3048555/140‑1 (MQ=255) aCTCTCTTACTGTCGTTTACATGTCTTTTTTAGGAATTGAAGTGATGCTGTTTGTTTCTTAACATATTAAGAAAAATAAAAACACAATAAAATATTCGGCTGTGGGCGTTGTTATTGCGCTTATTTTatatataatgaaa > 1:3260592/1‑133 (MQ=255) ctctctTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGTTGCTGTTTCTTCCGGAACATATTAAGAAAAAGAAATACAAAATCAGATATGCGGCTGTCGGCGTTCTGATTCCGAGTATTTTATATATACTGACat > 1:3056239/1‑140 (MQ=255) ctctTACTGTCGTTTACATCTCTTTTTTATTAATGGAAGTGATGCTGTTTCTTCCTGAACTTATGATGAATAATATTTAAACTTTCATATATTCTGCTTTCGTGTTTTTTATTTTTATTATTTTTTATATCCTTAGatat < 2:825079/140‑1 (MQ=255) ctTACTGTCGTTTCCATCTCTTTTTTAGGCATGGAAGGGTTGCTGTTTCTTCCTGAACATATGAATAAAAAGAAAAACAAATTCACATATGCGGCTGTGGGCTTTCTGCTTCCGATTATTTTATATATCCGGAGCTATGt > 1:2992480/1‑140 (MQ=255) ctTACTGTCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTGTTCCTGAACATATGAAGAAAAAGAAATACACATTAAGATATGCGGCTGTGGGCGTTGTGATTGCGATTATTTTATATATACAGACATATGt > 1:2872299/1‑140 (MQ=255) cTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATc < 1:1819651/140‑1 (MQ=255) tCGTTTGCATCTCTTTTTTAGGAATGGAAGTGATGCTTTTTCTTCCTGAACATATGAAGAAAAAGAAATACACAATCAGATATTCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATACTGACATATTTCATCgtt > 2:3623990/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATTGAAGTGATGCTGTTTCTTCCTGAACATAAGAAGAAAAAGAAATACACATTAAGATATGCGGCTGTCGGAGTTGTTATTCCCATTATTTTATATATCCTTAAATATGTAATAgtt > 2:3454700/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATTAAGAAAAAGAAATACACATTCAGATATTCGGCTGTCGGGTTTCTGATTCCGATTATTTTATATATCCTTACAAGTGTGATGgtt > 2:4160892/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATTAAGAAAAAGAAATACAAATTCAGATATTCGGCTGTCGGCTTTGTGATTAGGATTATTTTATATTTCCTGTCATATTTCATCgtt > 2:3672800/1‑140 (MQ=255) tCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTATTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTACGATTATTTTATATATACTGACATATGTCATCgtt > 2:941788/1‑140 (MQ=255) tCGTTTCCATCGGTTTTTTAGGAATGGAAGTGATGCGGTTTCTTGCGGAACATATGAATAAAAAGAAATACAAATTCAGATATGCGGCTGTCGGCTTTGTGATTCCGATTATTTTATATATAATGACATATGTCATCgtt > 2:1501231/1‑140 (MQ=255) gTTTCCATCTCTTTTTTATGAATGGAACTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTAGGGTTTCTGATTCCGATTATTTTATATATACTGACATATTTCATAgttgt > 2:1980263/1‑140 (MQ=255) gTTTCCATCTCTTTTTTATGAATGGAACTGATGCTGTTTCTTCCTGAACAAATGAAGAAAAATAAATACACAATCAGATATGCGGCTGTGGGGTTTCTGATTCCGATTATTTTATATATCCTGACATATTTCAACgttgt > 2:1833236/1‑140 (MQ=255) gTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAAAATATTAAGAAAAAGAAATAAACATTCAGATATTCGGCTGTCGGCTTTCTGATTACGATTATTTTATATATACTGACATAATTAATAgttgt > 2:3306393/1‑140 (MQ=255) gTTTCCATCTCTTTTTTAGGAATGGAAATGATGCTGTTTCTTACTGAACATATGAAGAAAAAGAAATACACATTAAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgt > 2:392527/1‑140 (MQ=255) gTTTCCATCTCTTTTTTAGGAAGGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATAAACATTCAGATATGGGGCTGTCGGCTTTCTGATTCCGAGTATTTTATATATCCTGACATATGTCATCgttgt > 2:2562571/1‑140 (MQ=255) gTTTCCAACTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTTATTCCCATTATTTTATATATCCTGACAAATTTCATAgtttt > 2:4000225/1‑138 (MQ=255) tttCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 1:1856632/140‑1 (MQ=255) gttCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCgttgtt < 2:1517361/139‑1 (MQ=255) agagacaGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGa < 1:3411263/134‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:513182/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:2829581/140‑1 (MQ=255) tttttAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 1:1014392/140‑1 (MQ=255) tttttAGGAATGGAAGCGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGAc < 2:453146/140‑1 (MQ=255) ggAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACCTATGTCATCGTTGTTGGGGCTTTGACCGCTcc < 1:861020/140‑1 (MQ=255) | AACGATAACGATTATTATTTTACTGATTGTGTTTGGGATCAGTTTTAAAATTTTTGACATCAATAATTTGCGCCCTGTTTTAGGTGAAGGTCTTGGACCCATTGCTAACTCTCTTACTGTCGTTTCCATCTCTTTTTTAGGAATGGAAGTGATGCTGTTTCTTCCTGAACATATGAAGAAAAAGAAATACACATTCAGATATGCGGCTGTCGGCTTTCTGATTCCGATTATTTTATATATCCTGACATATGTCATCGTTGTTGGGGCTTTGACCGCTCC > NZ_CP034943/3200840‑3201118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |