| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,992,777 | G→T | 81.5% | L295M (CTG→ATG) | walK ← | cell wall metabolism sensor histidine kinase WalK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,992,777 | 0 | G | T | 81.5% | 1190.6 / 241.4 | 521 | L295M (CTG→ATG) | walK | cell wall metabolism sensor histidine kinase WalK |
| Reads supporting (aligned to +/- strand): ref base G (45/52); new base T (212/212); total (257/264) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.74e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01 | |||||||||||
Only 100 of 556 total aligned reads displayed.
AATTCATCATCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGCTCT > NZ_CP034943/3992641‑3992913 | aTTCATCATCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAACTCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTcc < 1:946861/140‑1 (MQ=255) aTTCATCATCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTcc > 1:3606560/1‑140 (MQ=255) aTTCATCATCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGAAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTcc > 2:2518735/1‑140 (MQ=255) tcatcaTCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAg > 2:748459/1‑140 (MQ=255) tcatcCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAgcgc > 2:2014675/1‑140 (MQ=255) tcatcCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAgcgc > 2:1538206/1‑140 (MQ=255) cccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCACGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCggg < 2:2166327/140‑1 (MQ=255) cccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCggg < 1:2184787/140‑1 (MQ=255) cccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCggg < 1:3284472/140‑1 (MQ=255) cccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCggg < 2:2102250/140‑1 (MQ=255) cccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCggg < 1:3366274/140‑1 (MQ=255) ccGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGc < 1:2927841/140‑1 (MQ=255) aTTTCAAGCAGCATAGAATCCTGCTGCTCAACTAAATCTTCAAACGTATAATTCTCTAGAATACCCAGCAAGCTCGTAATCGGCAGTTCTAAGGCTGTTTCTCGTGAAACGTTCAGCATCTCCAGCTCCGGGCTGTTTac > 1:3910497/1‑139 (MQ=255) tCAAGCAGCATAGAATCCTGCTGCTCCACTAACTCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAagag < 1:2077398/140‑1 (MQ=255) tCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAagag < 1:2682497/140‑1 (MQ=255) caTAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTg > 1:1955809/1‑140 (MQ=255) caTAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTg > 1:1579420/1‑140 (MQ=255) tAGAATCCTGCTGCTCCACTAAATCTTCCAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGcc < 2:2472552/140‑1 (MQ=255) tAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGcc < 1:2755463/140‑1 (MQ=255) tAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGcc < 1:2562070/140‑1 (MQ=255) tCCTGCTGCTCCACTAAATCTTCAAACGTATAAGTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGtt < 2:1467886/140‑1 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAATGGTGTTTCACGTGAAACGTTCAGCTTCTCCAGCGCCGGGCTGTGTATGAGAATAATTGCCCCGTTTCg > 1:2317193/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:4257889/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:4147561/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 1:332614/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:1239894/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:1192282/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:2845793/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 1:1627866/1‑140 (MQ=255) tgctgcTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCg > 2:321753/1‑140 (MQ=255) ctgctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGt > 2:3878852/1‑140 (MQ=255) ctgctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGt > 1:2400244/1‑140 (MQ=255) ctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTtg > 1:1428964/1‑140 (MQ=255) ctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTtg > 2:3022669/1‑140 (MQ=255) ctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTtg > 1:3423927/1‑140 (MQ=255) ctCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTtg > 2:3728473/1‑140 (MQ=255) tCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTtgt < 2:640713/140‑1 (MQ=255) cTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCg > 2:2797402/1‑140 (MQ=255) tCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGcc > 1:3756055/1‑140 (MQ=255) tCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGcc > 1:374414/1‑140 (MQ=255) tCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGcc > 1:2029549/1‑140 (MQ=255) tCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGGTTGTGGCGATAACGcc > 1:3630688/1‑140 (MQ=255) aaaCGTATTATTCTCTTCAATCCCCAGAAAGCTCGTAATCGGCATTTCTAATGCTTTTTAACGTGAAACGTTCAGCATCTACAGCTCAGGGCTGTTTAAGATAATAATTTGCCAGTTTATGTTTTTGGCGATAACGcgtt < 2:3295779/140‑4 (MQ=255) aaaCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGt < 2:352505/140‑1 (MQ=255) aaaCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGt < 2:2075020/140‑1 (MQ=255) aaaCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGt < 1:3490548/140‑1 (MQ=255) aaaCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGt < 1:2819728/140‑1 (MQ=255) aaaCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGt < 2:3771845/140‑1 (MQ=255) aCGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCt < 1:2988901/140‑1 (MQ=255) taATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCat > 2:91619/1‑140 (MQ=255) aaTTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCata < 2:1047141/140‑1 (MQ=255) aaTTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCata < 2:3389525/140‑1 (MQ=255) aaTTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCata < 1:1798385/140‑1 (MQ=255) aaTTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCata < 2:1620494/140‑1 (MQ=255) aaTTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCTGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCata < 1:2112809/140‑1 (MQ=255) tctcTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAg < 1:613941/140‑1 (MQ=255) gctctTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAg < 1:1713620/139‑1 (MQ=255) ctctTGAATCCCCAGCAAGCTCGGAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAgg < 2:2288014/140‑1 (MQ=255) tctTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGc < 1:737391/140‑1 (MQ=255) tctTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGc < 2:3606560/140‑1 (MQ=255) ctTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCa > 1:3879029/1‑140 (MQ=255) ctTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTGTGTGGCGATAACGCCGTCGGTCATATAGGCa > 2:2989693/1‑140 (MQ=255) ttGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCaa > 2:1267362/1‑140 (MQ=255) ttGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCaa > 1:4266668/1‑140 (MQ=255) tCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGGTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACa > 2:1352680/1‑140 (MQ=255) ccAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCAtata > 2:1748600/1‑127 (MQ=255) aGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGc > 1:306463/1‑140 (MQ=255) aGCAAGCTCGTAATCGGCATTTCTAAGGCTGTGTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGACTGATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGc > 1:1193622/1‑140 (MQ=255) tAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTg < 2:3681080/140‑1 (MQ=255) aTCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATTGGCAATAACAGAGGCAAGCTTTCTgcg < 2:2725922/140‑1 (MQ=255) aTCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCACCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTgcg < 2:1112922/140‑1 (MQ=255) cGGCATTTCTAAGTCTGTTTCACGTGACACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGct < 1:816710/140‑1 (MQ=255) cGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGct < 1:915208/140‑1 (MQ=255) ggCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCggg > 1:1908043/1‑51 (MQ=255) gCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGctct > 2:1672511/1‑140 (MQ=255) tAAGGCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGATTAAGAGAATAATTGCCCCGGTTCTGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTg > 2:1931701/1‑140 (MQ=255) ggCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCa < 2:1823223/140‑1 (MQ=255) gCTGTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCAt > 2:855134/1‑140 (MQ=255) gTTTCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGc > 1:1026426/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 2:399729/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 2:3070099/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc < 1:4019674/140‑1 (MQ=255) tttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 2:3829873/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGGTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 1:1335464/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 1:2482393/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 1:4100847/1‑140 (MQ=255) tttCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGcc > 1:3145413/1‑140 (MQ=255) ttCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCt > 2:469450/1‑140 (MQ=255) tCACGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCGGTCCTCGCCTg > 2:2958870/1‑140 (MQ=255) aCGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTggg < 1:3807273/140‑1 (MQ=255) aCGTGAAACGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTggg < 1:2257036/140‑1 (MQ=255) aCGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTggg < 1:1393576/140‑1 (MQ=255) tGAACCGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCACTAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCAt > 1:1494327/1‑140 (MQ=255) aaCGTTCAGCATCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCtt > 2:3190742/1‑140 (MQ=255) gagcatcTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGct < 1:852747/139‑1 (MQ=255) cagcatCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGct < 1:561443/140‑1 (MQ=255) cagcatCTCCAGCGCCGGGCTGTCTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGct < 1:2616028/140‑1 (MQ=255) gcatcTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGctct < 2:332925/140‑1 (MQ=255) gcatcTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGctct < 2:587869/140‑1 (MQ=255) gcagcTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGctct < 2:2400244/140‑1 (MQ=255) | AATTCATCATCCCGCTCAATTTCAAGCAGCATAGAATCCTGCTGCTCCACTAAATCTTCAAACGTATAATTCTCTTGAATCCCCAGCAAGCTCGTAATCGGCATTTCTAAGGCTGTTTCACGTGAAACGTTCAGCAGCTCCAGCGCCGGGCTGTTTAAGAGAATAATTGCCCCGTTTCGGTTTGTGGCGATAACGCCGTCTGTCATATAGGCAATAACAGAGGCAAGCTTTCTGCGCTCTCCTTCTGTCATCGCCTGGGCATCTTCAAGCTCT > NZ_CP034943/3992641‑3992913 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |