| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,996,857 | C→A | 9.1% | intergenic (‑163/+43) | purA ← / ← EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,996,857 | 0 | C | A | 9.1% | 470.6 / 10.8 | 200 | intergenic (‑163/+43) | purA/EO946_RS20530 | adenylosuccinate synthase/VOC family protein |
| Reads supporting (aligned to +/- strand): ref base C (76/99); new base A (2/23); total (78/122) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.73e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 219 total aligned reads displayed.
TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCTC > NZ_CP034943/3996718‑3996995 | tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3869755/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 1:1522245/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTAGTTTTACAAGCGTTTTCTCATAGCATTGTcc > 1:2918870/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAAATGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTACATTCGTTTTACAAGCGTTTTCTCATCGCATTGTcc > 2:3702683/1‑140 (MQ=255)tCAAAACGATTCTATTCAAACAAATAAAGTTTATCATTGAAGAAACAGAAAGTAAATTGTAAATCCGAACAATAAATTAATGTAAATCAATATTCGTTCGCTTCAATTCGTTTTACAAGCGTTTTCTAATCGCATTGTcc > 2:665567/1‑140 (MQ=255) gATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAg > 1:3433315/1‑140 (MQ=255) ttCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGcg > 2:3629500/1‑139 (MQ=255) ttCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAAAATTAACTTAATGTAAATCACTATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTTTCCTAAAAAGCt > 2:1795573/1‑140 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 1:1491368/140‑1 (MQ=255) ttCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGa < 2:1035677/140‑1 (MQ=255) acaaaTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACtt > 1:96543/1‑140 (MQ=255) caacTCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACttt < 1:313549/140‑1 (MQ=255) tCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATc > 1:3050561/1‑140 (MQ=255) tATCAGTGAAGAAACATAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc < 1:1963194/140‑1 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc > 1:603266/1‑140 (MQ=255) tATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGc < 1:4097571/140‑1 (MQ=255) aagaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGaaaaa > 1:3697330/1‑140 (MQ=255) agaaACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAag < 1:517943/140‑1 (MQ=255) aaaCAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCTCGAAAAagag > 2:2831936/1‑140 (MQ=255) aaaCAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTGTAGCACGAAAAagag > 2:2282290/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑t > 1:3988266/1‑140 (MQ=255) gAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑t < 2:125614/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑tt < 1:2591578/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑tt < 2:3829014/140‑1 (MQ=255) aaaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑tt < 1:3576020/140‑1 (MQ=255) aaaGTCAAATGTAAATCCGAACATTTAATGAATTTAAATCAATATTCGTTAGCTTGAATTCGTTTTACAAGCGTTTTCTCATCGCATTGTACTAAAAAGCTCGTGAAACTTTTATCCATTAGCACGAAAAAGAGTTAC‑tt < 1:2800232/140‑1 (MQ=255) aaGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTg > 1:3321375/1‑140 (MQ=255) aGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGc < 1:863604/140‑1 (MQ=255) tCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCt > 1:3850461/1‑140 (MQ=255) aTTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGat < 2:338314/140‑1 (MQ=255) ttGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGata < 1:461669/140‑1 (MQ=255) tGTAACTCCGAACAGTAAAATAATGTAAATCACTATTCGTTCGCTTCCATTAGTTTTACAATCGTTTTCTCATCGCATTTTCCTAACAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGatat < 2:2448441/140‑1 (MQ=255) tGTAAATCCTAAAATTAAATGAATGTAAATCAATATTCGTTCGCTCCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGatat < 2:2229836/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGatat < 1:3074799/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGatat < 1:212074/140‑1 (MQ=255) tGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGatat < 2:90695/140‑1 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAATCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTATCACGAAAAAGACTTAC‑TTGCCTGATATCCCtt > 1:822291/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCtt > 1:2559592/1‑140 (MQ=255) aTCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTGTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCtt > 1:4159699/1‑140 (MQ=255) tttaaataaaTATTGGTTCGCTTCATTTCGTTTTAAAATCTTTTTCTAATCGCATTGTCCTAAAAAGCTGGTCAAAATTTTATACTTTACAACTAAAAAGTGTTAT‑TTGCCTTATACCCGTTTTTTTTTAATAAAAACGa < 2:1345127/138‑1 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 2:352594/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1091543/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:3456120/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:2841564/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGa > 1:1582061/1‑140 (MQ=255) tGTAAATCAATATTCGTTCGCTCCCATTCTTTTTACAAGCGTTTTGACTTCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTCGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTAATAAAAACGa < 2:2067809/140‑1 (MQ=255) aaTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTCGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTGTGTATTCATAAAAACGACTCg > 2:320610/1‑140 (MQ=255) aTCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCGTTTTGTATTCATAAAAACGACTctc > 2:2489491/1‑138 (MQ=255) aaaTATTCTTTCGCTTCCATTCTTTTTAAATGCTTTTTCTCATCGCTTTGTCATAAAAAGATCGTGAAACTTTTATCCTTTAGCACTAAAAAGTTTTAT‑TTGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCa < 2:3012709/139‑1 (MQ=255) tatTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAAcc > 2:876576/1‑140 (MQ=255) gttcgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCg > 1:180521/1‑140 (MQ=255) tgcgCTTCAATTCTTTTTAAACGATTTTTCTCATCGATTTGTCCTAAAAAGCTCGTGAAATTTTTTTCCTTTTCAACGAAAAATATTTAC‑TTGCCTTTTATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCgg < 2:1241263/138‑1 (MQ=255) tcgCTTACATTCTTTTTAAAAGCGTTTTATAATCGCATTGTCATAAAAAGCTCGTGAAAATTTTATCCTTTACCACTAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGa < 2:2411596/140‑1 (MQ=255) tcgCTACCATTCGTTTTACAAGCTTTTTCTCATCGCATTTTCATAAAAAGCTCGTTAAAATTTTATCCTTTAGCACGAAAAATAGTTAG‑TTGCCTTATATCCATTTTGTATTAATAAAAACGACTCGCCAACCGTCCGGa < 2:1013699/140‑1 (MQ=255) cgCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGAGTCGCCAACCGTCCGGAt > 1:2285761/1‑140 (MQ=255) cTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATcc > 2:2708466/1‑140 (MQ=255) ttacATTCGTTTTACAAGCGTTTTCTCATCGCTTTGTCCTAAAAAGCTGGTTAAACTTTTATCCTTTAGCACTAAAAAGTGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCct < 2:3797286/137‑1 (MQ=255) tcacATTCTTTTTAAATGTTTTTACTCCTCGCTTTGTCAAAAAAAGCTCGTTAAATTTTTATCCTTTACCAGAAAAACTTGTTCC‑TTGCCTTATATCCTTTTTTTATTCATAAACACGACTCGCCAACCGTCCGGATCct < 1:770633/137‑1 (MQ=255) ttCGTTTTACAATCGTTTTCTCATGGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCACTTTTGTATTCATAAAAAAGACTCTACAACAGTCCGGATCGTCTATc > 2:3098179/1‑140 (MQ=255) ttCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAGAAACGACTCGCCAACCGTCCGGATCCTCTATc > 1:2895154/1‑140 (MQ=255) ttCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATc > 2:2823294/1‑140 (MQ=255) ttCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATc > 2:3501513/1‑140 (MQ=255) ttCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATc > 1:1181052/1‑140 (MQ=255) ttCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCATTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTCTTCATAAAAACGACTCGCCAACCGTACGGATCCTCTATc > 2:3890822/1‑140 (MQ=255) ctttttACAAGGTTTTTCACATCGAATTGTCCTAAAATCCCCGTTAAACTTTCACCCTTCACCCCCAAAAA‑CTTTACGGTGCATGATATCAGTTTTTTTTTAATAACAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 1:1602224/138‑1 (MQ=255) ctttttACAAGCGTTTTCTCATCGAATTGTCCTAAAAAGCTCGTCAAACTTTTAGCCTTTAGCACGAAAAAGTGTTAC‑TTGCCTGATAGCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 2:1318208/138‑1 (MQ=255) cGTTTTACAAGGGTTTTCTAATCGCTTTGTCCTAAAAAGCCCGTTAAATTTTTATCCTTTAGCACTAAAAATTGTTAG‑TTGCCTGATAGCCCTTTTGTTTACATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGt < 2:1675857/140‑1 (MQ=255) cGTTTTACAAGCTTTTTCTCATCGCATTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTTTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGt < 2:4144061/140‑1 (MQ=255) ttttACAAGCGTTTTCTCATCTCATTTTCATAAAAAGCTCGTTAAACTTTTATCTTTTAGAACGAAAAAGAGTTAC‑TTGCCTTATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:595104/140‑1 (MQ=255) ttttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACTAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTCTTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa > 2:1577310/1‑140 (MQ=255) ttttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa > 2:343867/1‑140 (MQ=255) ttttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa > 2:1937045/1‑140 (MQ=255) ttttACAAGCGTTTTCTCAGCGCTTTGTACTAAAAAGCTCGTCAAACTTTTATCCTTTAGCACGAAAAAGAGTTAG‑TTGCCTGATATCCGTTTTTTATTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:1654090/140‑1 (MQ=255) ttttAAAAGGTTTTTCTCATCGCTTTGTCATAAAAAGCTCGTTAAAATTTTATCCTTTAGCACCAAAAATATTTAA‑TTGCCTGATATCCCTTTTTTATTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 2:155782/140‑1 (MQ=255) tttaACAAGGTTTTTATCATCGATTTGTACTAAAACGCTCGTTAAATTTTTATCTTTCACCACTAAAACTAGTTTG‑TTGCGTGATATCCTTTTTGTATACATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCa < 1:1148893/140‑1 (MQ=255) tttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCAc > 1:2111098/1‑140 (MQ=255) tttACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCAc > 1:3818583/1‑140 (MQ=255) ttAAAAGCGTTTTATACTCGCATTGTCCAAAAAAGCTCGTGAAACTTTTTTCGTTTCGCACTAAAAAGATTTAG‑TTGCCTGTTATCCCTTTTGTATTAATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACg < 2:3984526/140‑1 (MQ=255) tACAAGGGTTTTATCTTGGCTTTGTCATAAAATGCTCGTTAAACTTTTATCCTTTACCACTAAAACTAGTTAC‑TGGCCTGATATCCCTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc < 2:1722725/140‑1 (MQ=255) tACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGc > 2:3053008/1‑140 (MQ=255) ggtttttCTCATCGCTTTGTCCAAAAAAGATCGTTAAAATTTTATCCTTTCGCACCAAAAAGAGTTAG‑TTGCCTGATATCCCTTTTTTTTTAATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:352594/137‑1 (MQ=255) gggTTTTCTAAGCGCTTTGTCCAAAAATCCTCGTCAAAGTTTTAACCTTTAGCACTAAAAAGAGTTCG‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 1:4011623/138‑1 (MQ=255) gctttttCTCATCGAATTGTCCTAAAAAGCTCGTGAAAATTTTATCCTTTAGCACGAAAAAGAGTTAC‑TGGCCTGATATCCCTTTTTTATTCATATACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:2895154/137‑1 (MQ=255) gCGTTTTCTAATCGCATTGTCAAAAAAAGCTCGTTAAAATTTTATCCTTTAGCACGAAAAAGATTTAC‑TGGCCTTATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCa < 2:1181052/140‑1 (MQ=255) gtttttCTCTTCGTAGTGTAAAAAAAAGCTCCTTAATGTTTTATCCTTCACCACAAAATATAGTTTT‑TTGCATTATAGCCCTTTTTTATTCTTAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 1:2427168/138‑1 (MQ=255) gtttttCTCATCGCATTGTCCTAAACAGCTCGTTAAAATTTTATCCTTTAGCACGAAAAAGATTTAG‑TTGCCTGATATCCATTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:1513199/138‑1 (MQ=255) ggTTTTCTCATCGCTTTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTCCCACTAAAAAGAGTTAG‑TTGCCGGATATCCCTTTTGTTTCCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:4036074/139‑1 (MQ=255) ggTTTTATCATCTCATTGTCATAAAAAGCTCGTGAAACTTTTATCCTTTACCACTAAAAAGAGTTAC‑TTGCCTCATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:492080/139‑1 (MQ=255) ctttttCTAATCGCATTGTCATAAAAACCTCTTTAAAATTTTATCCTTTAGCACTAAAAATAGTTAC‑TTGCATGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:2971009/138‑1 (MQ=255) cGTTTTCTCATCGAATTGTCCTAAAAAGCTCGTTAAAATTTTATCCTTTACCACTAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCAt < 2:4159699/140‑1 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCCTAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 2:4049896/1‑140 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:4262120/1‑140 (MQ=255) ttttCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATgg > 1:178553/1‑140 (MQ=255) tttCTCTGCGCATTGGCCTAAAATGCGCTTCAAAGTTTTAGCCTTTCCCACGAAAAAGTGTTCG‑GTGCCTGATATCCCTTGTTTTTTCATAAACACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:1290698/140‑1 (MQ=255) tttCTCATCGAATTGTCCAAAAAAGCTCGTGAAAATTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 2:3304570/140‑1 (MQ=255) tttATCATCGCTTTGTCCAAAAACGCTCTTTAAAATTTTATCCTTTACCACCAAAAATAGTTAC‑TTTCATGATAGCCTTTTTTTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGc < 1:789907/140‑1 (MQ=255) tCGCATTGGCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTCTCGTCACGCCTCCATGGCTCCAGTa > 2:751799/1‑140 (MQ=255) ttGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGt > 1:1314826/1‑140 (MQ=255) tCCTAAACAGCTCGTTAAACTTTTATCCTTTAGCACTAAAATGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCAAAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 1:2929143/140‑1 (MQ=255) tCCTAAAAAGCTCGTCAAACTTTTACCCTTTCCCACCAAAAAGTGTTAG‑TTGCATGATATCCCTTTTGTATACATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTtct < 1:392101/140‑1 (MQ=255) | TCAAAACGATTCTATTCAAACAAATCAAGTTTATCAGTGAAGAAACAGAAAGTCAATTGTAAATCCGAACATTAAATTAATGTAAATCAATATTCGTTCGCTTCCATTCGTTTTACAAGCGTTTTCTCATCGCATTGTCCTAAAAAGCTCGTGAAACTTTTATCCTTTAGCACGAAAAAGAGTTAC‑TTGCCTGATATCCCTTTTGTATTCATAAAAACGACTCGCCAACCGTCCGGATCCTCTATCGTCACGCCTCCATGGCTCCAGTACGGGTTCTC > NZ_CP034943/3996718‑3996995 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |