New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607623 =	118 (0.860)	16 (0.130) +AGTAGCCCCT	11/250	5.2	9.7%	coding (466/1125 nt)	EO946_RS03185	collagen‑like protein
	?	NZ_CP034943	= 607846	204 (1.490)					coding (689/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607752‑607623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCT  <  NZ_CP034943/607846‑607709                                                                                                                                   ||||||||||                                                                                                                                           ccCCGGCTGCTCCCGCCTCCCCGGTAGCTCCTGTGGCTCCGGCTGCCCCCGCTTCCCCGGTAGCTCCTGTCGCTGGGGGTGGTCCGGGTTCCCCCGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCCT                                                                                                                                            <  2:18049/138‑1                                                                     GTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCGTCCCCAGT                                                                                                                                                   >  2:1363964/1‑65                                                                           CCGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTA                                                                                                                                                  >  2:381781/1‑60                                                                             GGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCC                                                                                                                                             >  2:783460/1‑63                                                                             GGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGTAGCCCC                                                                                                                                             <  1:783460/63‑1                                                                                        CTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCAGT                                                                                                                                                   <  1:1621800/46‑1                                                                                        CTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCGTCCCCAGT                                                                                                                                                   >  2:1621800/1‑46                                                                                                 gAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTCGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGGGGCTCCCGTCGCT                                            <  1:1419899/139‑1                                                                                                      ccgGTCGCTCCGGCTGGTCCGACGTCCCCAGTCGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGT                                       <  2:523981/137‑1                                                                                                      CCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGT                                       >  1:1270219/1‑140                                                                                                      CCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGT                                       >  1:522635/1‑140                                                                                                          gCGCTCCGGCCGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCGTCCCCGGGAGCTCCTGTCGCTCCGGCGGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGT                                   <  1:59167/139‑1                                                                                                               CCGTCTGGTCCTACGTCCCCTTTAGCCCCTGTGGCTCCGGGCGCTCGGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGC                              <  1:1773053/140‑1                                                                                                               CCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGC                              >  2:1467183/1‑140                                                                                                                  GCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                           <  2:2035690/140‑1                                                                                                                  GCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                           <  2:289469/140‑1                                                                                                                  GCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTC                           <  2:658460/140‑1                                                                                                                      gtgcgaCTTCCCCCGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCG                       <  1:627421/134‑1                                                                                                                        gcgacgTCCCCAGTCGCACCTGTGGCTCCCGTCGGTCCTGTTGGTCCGGCTTCCCCGGTAGCTCCTGGCGCTCCGGCTGGTCCGACGTCCCCAGTCGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGT                     <  2:844768/134‑1                                                                                                                            cgTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCGGGGGCGCCCGACGCAACGGGTGGGCCGGGTTCCACGGGAGCT                 >  1:416100/3‑140                                                                                                                               CCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCT              <  2:522635/140‑1                                                                                                                               CCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCT              <  2:971296/140‑1                                                                                                                                CCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGGAGCTCCTG             >  1:1664921/1‑140                                                                                                                                     TAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCGGGTCCGTCGTCCCCAGTAGCCCCTGTGGCGCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGGAGCTCCTGgggcg        >  1:1889044/1‑135                                                                                                                                        CCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGCCTCCCGTCGCTCCGGTTGGTGCGGCGTCCCCGGTAGCTCCTGTCGCTGCG     >  1:1346888/1‑140                                                                                                                                        CCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTAGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCG     >  1:1796013/1‑140                                                                                                                                         gCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGG    <  2:315838/139‑1                                                                                                                                           CTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGGTGGTCCGACGTCCCCAGTAGCCCCTGTCGCTCCCCTCGCTCCGGTTGGTCCGGCTTCACCGGTAGCTCCTGTCGCTCCGGgt  >  1:1187083/1‑138                                                                                                                                           CTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCT  >  1:607548/1‑140                                                                                                                                           CTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCT  >  1:1148615/1‑140                                                                                                                                            TGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGT                                                                         <  1:557193/68‑1                                                                                                                                            TGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGT                                                                         >  2:557193/1‑68                                                                                                                                   ||||||||||                                                                                                                                           CTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607752‑607623 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTGGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCT  <  NZ_CP034943/607846‑607709

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.