Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NZ_CP0349432,270,0640GC30.1% 153.3 / 17.8 90L39V (CTA→GTA) prsWglutamic‑type intramembrane protease PrsW
Reads supporting (aligned to +/- strand):  ref base G (24/34);  new base C (0/25);  total (24/66)
Fisher's exact test for biased strand distribution p-value = 3.73e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

ACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTTTATATT  >  NZ_CP034943/2269925‑2270202
                                                                                                                                           |                                                                                                                                          
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  2:1372443/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:116812/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  2:1276697/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1989122/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1968656/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1860463/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1829016/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1651905/1‑140 (MQ=255)
aCCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACAGTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAg                                                                                                                                            >  1:1166571/1‑140 (MQ=255)
     cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAATAACAACCCCTAGaaaaa                                                                                                                                       >  2:688151/1‑140 (MQ=255)
     cAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGaaaaa                                                                                                                                       >  1:1232218/1‑140 (MQ=255)
            aaCAATTTTATTTATTCCACCAAAACCCCGTACGATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAAATTTGGGGTAAATACAACAACAACCCCTAGAAAAAACGACCg                                                                                                                                <  1:1969445/140‑1 (MQ=255)
             aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGa                                                                                                                               >  1:58656/1‑140 (MQ=255)
             aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGa                                                                                                                               >  1:1683912/1‑140 (MQ=255)
             aCCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGATTCCGACTCCAACATTCTCTTTTTCAAGCACGTACTGGAAATACAGTGACGGAAATACAAGAACAACGCCTAGAAAAGACgcgccg                                                                                                                               >  2:1203021/1‑135 (MQ=255)
               cATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAg                                                                                                                             >  2:341087/1‑140 (MQ=255)
                tttttAATTATACCACCAAAACCCATCAACAAAAAAAATAACATAAAAAGCTTCCGCCTCCCAAATTCTATTTTTCAAGCACGTACTGTATAAACTTTGTGGTAAATACAACAACAACCCCTACAAAAAACGACCGAAGc                                                                                                                            <  1:517390/139‑1 (MQ=255)
                aTTTTAATTATTCCTCCAAAAACCCTTAATATAAAAAAGAAACGAAAAAGCTTCCGCATCCCACATTCTATTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTATAAAAAACGACCGAAGc                                                                                                                            <  2:1072610/140‑1 (MQ=255)
                aTTTTAATTATACCTACAAAAACCCTTAATATAAAAAAGAAAACAAAAAGCTTCCGCATCCCACTTTCTCTTTTTAAAGCACGTACTGGATAAACATTGTGGGAAATACAACAACAACCCCTACAAAAAACGACCGAAGc                                                                                                                            <  2:1860463/140‑1 (MQ=255)
                aTTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAATAAACTAAAAAGCTTCCGCCTCCCAAATTATCTTTTTCAACCACTTACTGGATAAACATTGTGGTAAATACAAGAACAACCCCTACAAAACACGACCGAAGc                                                                                                                            <  2:312193/140‑1 (MQ=255)
                  ttaaaggATGCCACCAACAACCCGGAACAAAAAAAACAACACAAACAGCTTCCCCCCCCCACATTCTCTTTTTCACGCACTTACGGGATAACCATGGTGGGAAATACACGAACAACCCCTAGAAAAAACGACCGAAGCAc                                                                                                                          <  1:1273765/134‑1 (MQ=255)
                   ttATTGATTACTCAAAAAACCCTGAAGATAAAAAAGAAACGAAAATGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGTAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:1970534/140‑1 (MQ=255)
                   ttATTGATCCCTCCAAAAACCTTAAAATAAAAAAACAAACAAAAACGGTCCCGCCTCCCACTTTCTCTTTTTCAAGCACGTACTGCATAAACATTGTGGTAAACACACCAACACCCCCTACAAAACACGACCGAAGCAcc                                                                                                                         <  1:341087/140‑1 (MQ=255)
                   ttAATTATTCATCCAAAAACCCTTAACATAAAAAAGAAACCAAAAAGCTTCCGCATCCCACATTCTCTTTTTAAACCACGTACTGGATAAAAATTGTGGGAAATACAACAACAACCCCTATAAAAAACGACCGAAGCAcc                                                                                                                         <  2:544486/140‑1 (MQ=255)
                   ttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:1968656/140‑1 (MQ=255)
                   ttAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:1989122/140‑1 (MQ=255)
                   ttAATGATTCCTCCAAAAACCCTCAATATAAAAAAGAAACTAAAAAGCTTCCGCCGCCCCCATTCTCTTTTTCACGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:2084865/140‑1 (MQ=255)
                   ttAATGATTCCTCAAAAAACCCTTAAGATAAAAAACAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTAAAGCACGTACTGTATAAACATTGTGGTAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:732224/140‑1 (MQ=255)
                   ttAATGATTCCTCAAAAAACCCTCAATATAAAAAACAACCCAAAAAGCTTCCGCCTCCCAAATTCTATTTTTAAAGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACAACCCCTACAAAAAACGACCGAAGCAcc                                                                                                                         <  1:1185375/140‑1 (MQ=255)
                   ttAATGATTCATCAAAAAACCATTAATATAAAAAAGAAACAAAAAAGCTTCCGCCTCCCACATTCTATTTTTCAAGCACGTACTGGATAAACATTTTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCAcc                                                                                                                         <  2:1403437/140‑1 (MQ=255)
                     acttaTTCATCAAAAACCCCTTAATATAAAAAAGAAACGAAAAAGCTGCCGCCTCCCAAATTATATTTTTCAAGCACGTCCTGTATAAACTTTGTGGGAAATACAACAACAACCCATAGAAAAAACGACCGAAGCACCat                                                                                                                       <  1:999195/136‑1 (MQ=255)
                     aaTTATTCCTCAAAAACCCCTTAAGATAAAAAAGAAACCAAAACGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACTTAGTGTATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat                                                                                                                       <  2:1699083/140‑1 (MQ=255)
                     aaTGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCat                                                                                                                       <  2:81854/140‑1 (MQ=255)
                         aTTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACCTTCTCTTTTTCAGGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGt                                                                                                                   >  1:1155459/1‑140 (MQ=255)
                          ttcaaaaaaaaaCCCTTAACATAAAAAACAAACCAAAAAGGTGCCGCCTCCCAATTTATTTTTTTAAAGCACTTAGTGTATAAACTTTGTGGTAAATACAACAACACCCCATACAAAAAACGACCGAAGCACCATATGTa                                                                                                                  <  1:1372443/133‑1 (MQ=255)
                          ttCCTCCAAAACCCCTGAATATAAAAAATAAACCAAAACGCTTCCGCCTCCCAAATTCTTTTTTTCAAGCACGTACTGTATAAAATTTGTGGTAAATACAACAACAACCCCTATAAAAAACGACCGAAGCACCATATGTa                                                                                                                  <  1:484532/140‑1 (MQ=255)
                          tcacacaaaaaaCCCGTAACAAAAAAAAAAAACCAAAAAGCTTCCGCCTCCCACATTCTCTTTTAAAAGCACGTACTGTATAAACTTTGTGGTAAATACAACAACCCCCCATCCAAAAAACGACCGAAGCACCATATGTa                                                                                                                  <  1:1617368/133‑1 (MQ=255)
                          taccacaaaaaaCCCTTAACAAAAAAAACAAACCAAAAAGGTCCCCCCCCCCACATTATCTTTTTCAACCACGTACTGTATAAACATTGTGGTAAAAACAACAACAACCCATACAAAAAACGACCGAAGCACCATATGTa                                                                                                                  <  1:931961/133‑1 (MQ=255)
                           tcatacAAAAACCCTGAAGAAAAAAAAGAAACTAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGTATAAACATTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTAc                                                                                                                 <  2:1166571/135‑1 (MQ=255)
                                cAAAAACCCTTAATATAAAAAATAAACCAAAACGCTTCCGCCTCCCACTTTCTCTTTTTAAAGCACGTAGTGGATAAACATTGTGGTAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:739409/140‑1 (MQ=255)
                                cAAAAACCCTTAACATAAAAAAGAAACGAAAACGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  2:1170118/140‑1 (MQ=255)
                                cAAAAACCCTCACTATACAAAACAAACCAACACGCGCCCGCCCCCCACATTCTCTTTTTAAAGCACTTACTGGATAAACTTTGTGGCAAATACAACAACAACCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:1167520/140‑1 (MQ=255)
                                aacacaCCCTCAACAAAAAAAACAAACCAAAACCCTTCCCCCCCCCAATTACAGTTTTAAAACCACGTACGGGATAAACTTTGTGGAAAATACAACAACAACCCCAACAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:1258274/135‑1 (MQ=255)
                                aaaaacCCCTCAATAAAAAAAATAAACCAAAAAGCTCCCGCCACACACATTCTCTTTTTCAAGCCCGTACTTGATAAACTTTGTGGCAAATACAACAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:691878/139‑1 (MQ=255)
                                aaaaacCCCTCAACAAAAAAAATAAACCAAACAGCTTCCCCCTCCCAAATTCTCTTTTTCAAGCACGTACTGGATAAACTTTGTGGGAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:1674713/139‑1 (MQ=255)
                                aaaaaaCCCTGATTAAAAAAAACAACCCAAAACGCTCCCCCCCCCCAATTTCTATTTTTCAACCACGTAATTGATAAACATTGTGGTAAATACAACAACACCCCCTAAAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:1903379/139‑1 (MQ=255)
                                aaaaaaCCCTCAAGATAAAAAAGAAACCAAAAAGCTTCCGCCGCCCAAATTCTCTTTTAAAAGCACGTACTGGATAAACTTTGTGGCAAAAACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGtt                                                                                                            <  1:2023553/139‑1 (MQ=255)
                                  aaaaCCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCa                                                                                                          <  2:1478045/140‑1 (MQ=255)
                                     ccccTCAACAAAAAAAACAACCAAAAAAGCTGCCCCCCCCCACTTTCTCTTTTCAACGCCCGTACTGCAAAAACTTGGTGGTAAATACAACAACACCCCCTACAAAACACGACCGAAGCACCATATGTACAGGTTCATTa                                                                                                       <  1:647124/139‑1 (MQ=255)
                                     aCCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTACAACCACGTACTGTATAAACTTTGTGGGAAATACAACAACACCCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTa                                                                                                       <  1:646956/140‑1 (MQ=255)
                                                      taaaCCAAAAAGCTTCCGCAACACAAATTAAATTTTTCATTAACGTACTGTATAAACATTGTTGTAAATACAATTAAAACACCTATAATAAAATAAATAATAACCATTTGTAAATGTTAATTATCATACTGATCTTTtat                                                                                      <  2:432558/139‑2 (MQ=255)
                                                             aaaaGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGTAAATACAACAACAACCCATACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTaaataaaaa                                                                               <  1:1563226/140‑1 (MQ=255)
                                                             aaaaGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAATAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTaaataaaaa                                                                               <  2:1077353/140‑1 (MQ=255)
                                                                aGCTTCCGCCTCCAACATTCTCTTTTTCAAGCACTTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTaaataaaaataa                                                                            <  2:506562/140‑1 (MQ=255)
                                                                       gccgccCACATTATCTTTTTCAAGCACGTACTGTAAAAACTTTGTGGGAAATACAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACa                                                                     <  1:688151/140‑1 (MQ=255)
                                                                                 ttatctTTTTCAAGCACTTACTGTATAAAAATTGTGGGAAATAAAACAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc                                                           <  1:275826/137‑1 (MQ=255)
                                                                                 ttCTCTTTTTCAAGCACTTACTGTATAAACATTGTGTGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc                                                           <  2:1689851/140‑1 (MQ=255)
                                                                                 ttCTCTTTTTCAAGCACGACCTGGATAAACATTGTGGGAAATCCAAGAACAACCCCTAGAAACAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc                                                           <  1:474886/140‑1 (MQ=255)
                                                                                 ttCTATTTTTCAATCACGTACTTGATAAACATTGTGGGAACTAAAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGcc                                                           <  2:556848/140‑1 (MQ=255)
                                                                                    tctTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCggg                                                        >  1:1974941/1‑140 (MQ=255)
                                                                                       ttttCAAGCACTTACTGTATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGc                                                     <  2:595315/140‑1 (MQ=255)
                                                                                       ttttCAAGCACGTACTGGATAAACTTTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGAGc                                                     <  2:608743/140‑1 (MQ=255)
                                                                                         ttCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCaa                                                   >  1:427552/1‑140 (MQ=255)
                                                                                          tCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt                                                  <  2:116812/140‑1 (MQ=255)
                                                                                          tCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAt                                                  >  1:1408595/1‑140 (MQ=255)
                                                                                          tCAAGCACGCACTGGATAACCAGTGTGGGAAATACAAGAACACCCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACACCGCGATGCCGGGAGCAAt                                                  <  2:417012/140‑1 (MQ=255)
                                                                                                aCGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGc                                            >  2:757848/1‑140 (MQ=255)
                                                                                                 cttACTGTATAAACTTTGTGTGAAATACAACAACAACCCCTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCa                                           <  1:1182776/138‑1 (MQ=255)
                                                                                                          tAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGAtt                                  >  2:376241/1‑140 (MQ=255)
                                                                                                          tAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGAtt                                  >  1:179017/1‑140 (MQ=255)
                                                                                                             acttggtgGGAAATACAAGAAAACCCCCTAGAAAACACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAACAATAACTTAACCGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  1:492032/135‑1 (MQ=255)
                                                                                                             accttGTGGGAAATCACAGAAACACCCCTAGAAAAAACGACCGAAGCACCCTATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  2:1739404/137‑1 (MQ=255)
                                                                                                             aCATTGTGGTAAATACAACAACAACTCCTACAAAAAACGACCGCAGCACCATATGTACAGGTTCATGACCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGAGGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  1:194203/140‑1 (MQ=255)
                                                                                                             aCATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTGAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  2:58656/140‑1 (MQ=255)
                                                                                                             aCATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGCGCACTTCCTGCAGAGATGATTGCa                               >  2:722604/1‑140 (MQ=255)
                                                                                                             aCATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  2:1683912/140‑1 (MQ=255)
                                                                                                             aCATTGTGGGAAAGACAAGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAAGTCCTGCAGAGATGCTTGCa                               <  1:473773/140‑1 (MQ=255)
                                                                                                                ttttgctaaaTACAAGAACAACAGCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTGTTAAATAAAAATAACTTAACACCGCGATGCCTGGAGCAATTCCTGAAGAGATGATTGCAAAc                            <  2:85480/133‑1 (MQ=255)
                                                                                                                ttGTGGGAAATACAATAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACGGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAAc                            <  2:1078524/140‑1 (MQ=255)
                                                                                                                  gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt                          >  2:399889/1‑140 (MQ=255)
                                                                                                                  gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt                          >  2:1814521/1‑140 (MQ=255)
                                                                                                                  gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt                          >  2:1788341/1‑140 (MQ=255)
                                                                                                                  gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt                          >  2:585809/1‑140 (MQ=255)
                                                                                                                  gtgGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACAt                          >  2:1276459/1‑140 (MQ=255)
                                                                                                                        aaTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCa                    >  2:1300500/1‑140 (MQ=255)
                                                                                                                         aTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               <  2:1763189/128‑1 (MQ=255)
                                                                                                                         aTACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCa                               >  1:1763189/1‑128 (MQ=255)
                                                                                                                          tACAAGAACAACCCCTCGAAAAAACGACCGAAGCACCATATGGACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAAc                  <  2:1110827/140‑1 (MQ=255)
                                                                                                                          tACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATATTTTAAATAAAAATAACTTACCAGCGCGATACCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAAc                  <  2:372399/140‑1 (MQ=255)
                                                                                                                           aCAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAAcc                 >  2:191211/1‑140 (MQ=255)
                                                                                                                           aCAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATAAGGCAAcg                 >  2:1500641/1‑139 (MQ=255)
                                                                                                                              aGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct              <  2:1974941/140‑1 (MQ=255)
                                                                                                                              aGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct              <  1:1517963/140‑1 (MQ=255)
                                                                                                                              aGAACAACCCCTACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct              <  1:1240111/140‑1 (MQ=255)
                                                                                                                              aGAACAACCCATACAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTCACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACctct              <  2:97750/140‑1 (MQ=255)
                                                                                                                                      cccTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTTta      <  1:585809/140‑1 (MQ=255)
                                                                                                                                       ccTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTTtat     <  1:757848/140‑1 (MQ=255)
                                                                                                                                        cTATAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTTtata    <  2:1651905/140‑1 (MQ=255)
                                                                                                                                          aGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATCCTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCGTTCCTTTATAtt  >  2:89459/1‑140 (MQ=255)
                                                                                                                                           |                                                                                                                                          
ACCATCAGAATAAACCATTTTAATGATTCCTCCAAAAACCCTGAAGATAAAAAAGAAACGAAAAAGCTTCCGCCTCCCACATTCTCTTTTTCAAGCACGTACTGGATAAACATTGTGGGAAATACAAGAACAACCCCTAGAAAAAACGACCGAAGCACCATATGTACAGGTTCATTATCATACTGATCTTTTAAATAAAAATAACTTAACAGCGCGATGCCGGGAGCAATTCCTGCAGAGATGATTGCAAACATCAGGCAACCTCTTTCCTTTATATT  >  NZ_CP034943/2269925‑2270202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑