New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	607689 =	133 (0.720)	11 (0.060) +CCCGGTG	9/256	6.8	7.9%	coding (532/1125 nt)	EO946_RS03185	collagen‑like protein
	?	NZ_CP034943	= 607690	138 (0.740)					coding (533/1125 nt)	EO946_RS03185	collagen‑like protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607825‑607689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGT  <  NZ_CP034943/607690‑607598                                                                                                                                          |||||||                                                                                              GGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCC                                                                                                   >  2:919130/1‑140  GTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCt                                                                                                  <  2:2298912/140‑2   TCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCtg                                                                                                 <  2:1926196/140‑3                         GTCGCTCCGGCTGGTCCGGCGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGGCGCTCCGCCGTCGCCCGCAGCCCCTGTGGCTCCGGTCGCTCCGGTGGG                                                                           >  2:2320645/1‑140                         GTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGG                                                                           >  2:1219420/1‑140                          TCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGGGGCTCCGGCCTCCCCCGGAGCGCCTGGGGCTCCCGTCGCTCCGGTGGGT                                                                          >  1:2404023/1‑140                             CTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGGCCGACGTCCCCCGTAGCCCCGGTGGCGCCCGTCGCTCCGGGTGGGCCG                                                                       >  2:2114856/1‑140                               CCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGTCGGCCCCAGGAGCCCCGGTGGCTCCCGGCGCGCCGGGTGGTCCGGg                                                                     >  1:2239001/1‑139                                 GGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTT                                                                   <  1:1219420/140‑1                                      GTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTGCGCGTGGTCCGAAGTCCCCAGTCGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCG                                                              >  1:776201/1‑140                                      GTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGGTGGTCCGGCTTCCCCG                                                              >  1:1771420/1‑140                                       TCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCGTCCCCGG                                                             >  1:1886836/1‑140                                            CGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCT                                                        >  1:208135/1‑140                                                CCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCAGACGTCCCCAGAAGCCCCTGTGGCTCCAGTCGCTCCGCTTGGTCCGCCTTCCCCGGTAGCTCCTG                                                    >  1:2420550/1‑140                                                                                                                                          CCCGGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGT  <  1:1143172/100‑1                                                                                                                                             GGTGGCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGT                                      <  1:924821/61‑1                                                                                                                                          |||||||                                                                                              GGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGACGTCCCCAGTAGCCCCTGTGGCTCCCGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NZ_CP034943/607825‑607689 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCTCCTGTCGCTCCGGTTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGTCCGGCTTCCCCGGTAGCTCCTGTCGCTCCGGCTGGT  <  NZ_CP034943/607690‑607598

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.