| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 91969 | NA (NA) | 15 (0.030) | 12/248 | NT | NA | intergenic (+131/‑39) | EO946_RS00485/EO946_RS00490 | 16S ribosomal RNA/23S ribosomal RNA |
| ? | NZ_CP034943 | 91973 = | NA (NA) | intergenic (+135/‑35) | EO946_RS00485/EO946_RS00490 | 16S ribosomal RNA/23S ribosomal RNA | |||||
ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/91830‑91969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGTAAGACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGGGAGCTGTAAGCAAGCTTTGAT > NZ_CP034943/91973‑92110 ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 2:7059152/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 2:7059034/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 2:3083728/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 2:2413985/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA > 1:3342086/1‑140ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA > 1:6865793/1‑140ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA < 1:6120213/140‑1ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGGCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA > 1:3367732/1‑140 CTTTCTAAGGATAGTTACGGAATATCAGACATTGGGTCTTATAAACAGACCGTTCCCTGTGTTGTTTCGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTCGACATCACATTCAAGTAgt < 1:6033394/140‑3 ACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTA < 1:5837714/140‑1 TGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGG > 2:764004/1‑140 TGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGG > 2:1737190/1‑140 TGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGG < 1:1498325/140‑1 GGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTT < 1:1000588/140‑1 GGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTT < 1:1000573/140‑1 TATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTT > 1:5249825/1‑140 GTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCA < 1:5036449/140‑1 CTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTG < 1:6456041/140‑1 AAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATTACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGA > 1:7377015/1‑140 CTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGG < 1:1811696/140‑1 AAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGG < 2:5249825/140‑1 TGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGAT < 1:764004/140‑1 TGAAAACTAGATAACAGTAGACATCACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGAT < 1:1737190/140‑1 CACATTCAAGTAATACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTCGGAGCCGATGAAGGACGGGACGAACACCGCTCTGCTTCGGGGAGCGGTAAGCAAG > 1:1426236/1‑140 gAGTAAGACAAGATATCACATTGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGTGAGCTGTAAGCAAGCTTTGAT < 2:7302688/139‑1 ACCTCCTTTCTAAGGATATTTACGGAATATAAGACCTTGGGTCTTATAAACAGAACGTTCCCTGTCTTGTTTAGTTTTGAAGGATCATTCCTTCGAAACGTGTTCTTTGAAAACTAGATAACAGTAGACATCACATTCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/91830‑91969‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aGTAAGACAAGATATCACATAGTGATTCTTTTTAACGGTTAAGTTAGAAAGGGCGCACGGTGGATGCCTTGGCACTAGGAGCCGATGAAGGACGGGACGAACACCGATATGCTTCGGGGAGCTGTAAGCAAGCTTTGAT > NZ_CP034943/91973‑92110 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |