| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | 2220949 = | 195 (0.430) | 3 (0.010) | 3/230 | NT | 1.7% | coding (799/2796 nt) | dinG | ATP‑dependent DNA helicase DinG |
| ? | NZ_CP034943 | = 2220945 | 176 (0.420) | coding (803/2796 nt) | dinG | ATP‑dependent DNA helicase DinG | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTCAGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2221094‑2220949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgatgaAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTACGTA < NZ_CP034943/2220945‑2220807 TGTCAGAGAACCCCAATCATTCGATGAACATTCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGTAAATGAATAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGA < 1:7633092/140‑1TGTCAGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGA < 2:4528526/140‑1TGTCAGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGA < 1:5803582/140‑1 TCAGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATG < 1:6812597/140‑1 AGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGAT < 2:3628549/140‑1 AGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGAT < 2:3695858/140‑1 GAGAACCCCAATCCTTCGATGAACATGCCAATGAAGACTGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATG < 2:6497224/140‑1 GAGAACCCCAATCATTCGATGAACATGACAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATG < 2:6655580/140‑1 CGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAGGGCCAAATGATGATG < 1:248082/124‑1 CGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAGGGCCAAATGATGATG > 2:248082/1‑124 CCAATGAAGACGGGAACTTCGCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAAT > 2:3131893/1‑140 AATGAAGACGGGAACTTCGCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCG < 1:3131893/140‑1 AATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTACTCCGGGAATCGGAAAAACGATTGGCTATCTAATTACGGCTGCGCTAT > 2:6519793/1‑140 aGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAACACGATGGGCTATCTAATGCCGGCTGCGCTATGTCCCAAGAAATCAAAAAAACCGGTCATTATC < 1:6030161/139‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGCTTGGCTATCTAAGTCCGGCGGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 1:6132543/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:2286602/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:2019216/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:3217525/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:3317744/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:581896/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:3360936/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:4232607/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:6265909/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:7122672/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 1:1804206/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 1:1728656/140‑1 TGATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGATGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:7504057/140‑1 GATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCA > 1:688655/1‑140 GATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTAATTGCCAAGAAATCAAAAAAACCGGTCATTATCc > 2:2988433/1‑139 ATGATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAG > 2:1732906/1‑140 TGATGAAAGAAGGAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGT < 2:101681/140‑1 cTGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGTCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCTTTATCAGTAC < 1:5356423/139‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCTGGAATCTGAAAAACTATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:1973891/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:899053/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:846514/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:6160226/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:2062474/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTAC < 1:1950502/140‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC < 2:2352349/135‑1 ATGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATC > 1:2352349/1‑135 TGAAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAAGTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTACG < 1:7430132/140‑1 AAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTACGTA > 1:1368471/1‑140 TGTCAGAGAACCCCAATCATTCGATGAACATGCCAATGAAGACGGGAACTTCTCATTTGAGATCGAAAATTGGGAAGCGGGAAATGAAAAAGCGCTGTCAGAGTTAATGCCTGGGTATGAAAAAAGAGAAGGCCAAATGATGATGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NZ_CP034943/2221094‑2220949‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgatgatgaAAGAAGTAGCTGAAGCGTTTGCCAATCGTGAGCATGCGCTGATTGAAGCTCCTCCGGGAATCGGAAAAACGATTGGCTATCTAATTCCGGCTGCGCTATTTGCCAAGAAATCAAAAAAACCGGTCATTATCAGTACGTA < NZ_CP034943/2220945‑2220807 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |