| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP034943 | = 2766994 | 252 (0.590) | 4 (0.010) +AGCAGCACATCTTCCGAATCAAAAGTCGAAACC |
4/170 | NT | 1.9% | coding (60/660 nt) | EO946_RS14310 | hypothetical protein |
| ? | NZ_CP034943 | 2767028 = | 283 (0.630) | coding (94/660 nt) | EO946_RS14310 | hypothetical protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2766857‑2766994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCT > NZ_CP034943/2767028‑2767077 ||||||||||||||||||||||||||||||||| CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 2:6313391/140‑1 CATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCAGAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTAGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGC > 2:5418393/1‑140 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC > 1:4309086/1‑140 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC < 2:5766929/140‑1 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC < 2:7338107/140‑1 AAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACGTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAGCAGC < 2:212566/140‑1 CAGAAGGGAGCCTGACACATGAACAAACTGATACAGCTTGCTTTATTTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTcctca > 2:6844946/1‑135 AAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG > 1:4040482/1‑77 AAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAATAG < 2:4040482/77‑1 AACAAACTGATACAGCTTGCTTTATTTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGAAAGAGCT > 1:493017/1‑140 TACAGCTTGCTTTATTTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGA > 1:103125/1‑123 TACAGCTTGCTTTATTTTTCACATTGATGTTAACCGGTTGCTCGAATAGCAGCACATCTTCCGAATCAAAAGTCGAAACCACTGTTAAGACAACGGCAGCATTTCCTCAAAAGGAGCTGGAGA < 2:103125/123‑1 ||||||||||||||||||||||||||||||||| CCATAAAACCACCGACAGGAAAAAATGTAAAACAAAGTTAATCATAACCGATATATGAAGCAGAAGGGAGTCTGACACATGAACAAACTGATACAACTTGCTTTATTTTTCACATTGATAGTAACCGGTTGCTCGAAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NZ_CP034943/2766857‑2766994‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACTGTTCAGACAGCCGTAGCATTTAACCAAAAGGAATTGGAGAAAGAGCT > NZ_CP034943/2767028‑2767077 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |