New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NZ_CP034943 = 607537293 (0.650)3 (0.010) 3/240 NT 0.70% coding (380/1125 nt) EO946_RS03185 collagen‑like protein
?NZ_CP034943 607799 = 571 (1.320)coding (642/1125 nt) EO946_RS03185 collagen‑like protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 320 total aligned reads displayed.

GACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAC  >  NZ_CP034943/607399‑607671
                                                                                                                                          |                                                                                                                                      
gaccagccggaccaCCGGGAGCGACAGGAGCCACAGGAGCTACGGGGGAAGCCGGACCAGCCGGCCCGACCGGAGCGACTGGAGCGACAGGAGCGACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCt                                                                                                                                       <  2:4348166/140‑1 (MQ=11)
 accagccggaccaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTa                                                                                                                                      >  1:2399167/1‑140 (MQ=255)
          accaACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACCGGAGCTACCGGGGCAGCTGGACCAGCTGGAGCGACCGGAGCGACAGGAGCTCCCGGGGAAg                                                                                                                             >  2:6694291/1‑140 (MQ=255)
              aCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGTAGCAGCCGGAGAGGCAGGACCAGATGGAGCGACGGGAGCTGCAGGAGCTACGGGAGACGCCgc                                                                                                                         >  1:4793429/1‑139 (MQ=17)
               ccggagcgaccggagcgaCAGGGGCTACCGGGGACGCCGGACCAGCCGGAGCGACCGGAGCGACAGGGGCTCCAGGAGCTACCGGGGCCCCTGGAGCACCTGGGGCGACGGGAGCGACAGGAGCTACCGGCGGAGCCggc                                                                                                                        >  1:7236666/1‑139 (MQ=17)
               ccGTAGCGACAGGAGAGACCGGAGGTACGGGTGCAGCCGGCCAAGCGTGTGCGAGAGGAGCGACAGGAGCGACAGGAGCTACCGGCGAAGCTGGACCAGCTGGAGCGAGGGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                        <  1:2793747/140‑1 (MQ=17)
               ccGGAGCGCCAGGCGCCACCGGTCCTACCGGGGCAGCCGGCCCCGCCGGCGCGAGAGGAGCGACAGGCGCCACAGGACGCACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                        <  1:3269340/140‑1 (MQ=17)
               ccGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGCGCGACGGGAGCGACAGGAGCTACCGGGGGAGCCGGa                                                                                                                        >  1:3751449/1‑140 (MQ=255)
               ccGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                        <  2:7757261/140‑1 (MQ=255)
               ccGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCGACCGGAGCGACCGGCGACGCGGGACCTGCTGGAGCGGGCGGAGCGACAGGAGAGACCGGGGAAGCCGGa                                                                                                                        >  1:1644493/1‑140 (MQ=17)
                cGGAGCGACCCGAGCGACAGGCGCTACCGGGGAAGCCCGACCAGCCGGAGCGACAGGACCGCCAGGAGCGACAGGACCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                       <  1:2745656/140‑1 (MQ=18)
                     ggacaggagcgacaggagcTCCCGGGGAAGCCGGACCAGCCGGAGGGACAGGAGCGACAGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  1:1827057/139‑1 (MQ=255)
                     ggacagcagcgacaggctcAACCGGTGAAGCCGGACCAGCCGGACTGCCTGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  1:7067854/139‑1 (MQ=17)
                     cgaccggagccaccggagCTACCGGGGAAGCCGGACCAGCCGGAGCCACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  1:832735/140‑1 (MQ=14)
                     cgacaggcgcgacaggcgCTCCCGGCGCAGCCGGACCAGCCGGACCGACAGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  1:6774982/140‑1 (MQ=17)
                     cgacaggagcgacaggagCTACCGGGGAAGCCGGACCAGCCGGAGCGCCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  2:1097442/140‑1 (MQ=255)
                     cgacaggagcgacaggagCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                                  <  2:7651095/140‑1 (MQ=255)
                          ggagcgacaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCCGGGAAGCTCGACAACCACTCTCAACCGGACCCACACGCGCTACCGGGGAAGCCGGCGCAGCCGGGGc                                                                                                             >  2:4197805/1‑140 (MQ=17)
                           gagccacaggagcTCCCGGGGAAGCCGCCCCACCCGGAGCGACAGGCGCGACTCGAGCGACAGGAGCTACCGGGGAACCTGCACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGcc                                                                                                            <  1:1444399/140‑1 (MQ=17)
                              cgacaggagcGCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCCACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACg                                                                                                         <  1:7453415/140‑1 (MQ=255)
                                actggagcTACAGGGGAACCAGGACCAGCCGGAGCGACAGGAGCCACAGGAGCCACAGGAGCTACCGGTGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                       <  2:2871888/137‑1 (MQ=17)
                                acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCGGGACCAGCTGGAGCGACGGGAGCGAAAGGAGCTACCGGAGACACAGGCCCAACCGGAGCCACggg                                                                                                       >  2:7687485/1‑140 (MQ=17)
                                acaggagcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                       <  1:5168873/140‑1 (MQ=255)
                                acaggagcTACCGGCGAACCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                       <  1:973602/140‑1 (MQ=255)
                                    gagcGACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGcc                                                                                                   <  1:6732901/140‑1 (MQ=255)
                                      gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                 >  2:3699173/1‑140 (MQ=255)
                                      gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcac                                                                                                 <  1:4880320/140‑1 (MQ=255)
                                      gcTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGCGCGACAGGAGCcac                                                                                                 >  1:5755506/1‑140 (MQ=18)
                                       cTACGGGGGAAGCTGGACCAGCCGGACCACCCGGAGCGACCGGAGCCACAGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                <  2:2189340/140‑1 (MQ=11)
                                       cTACCGGGGAAGCCGGCCCAGCCGGAGCCCCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                <  1:3350282/140‑1 (MQ=255)
                                       cTACCGGGGAAGCCGGACCAGCCGGAGCTACAGGAGCGAAAGGAGCTACAGGAGCTACAGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                <  1:1257523/140‑1 (MQ=255)
                                       cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGTGCGACAGGAGCACACGGCCAAGCGGGACCATCAGGAGCTACGGGAGCGACAGGACCTACAGGCGAAGCCCGACCTCCCGGGGCCACGGGAGCcacc                                                                                                >  1:1289282/1‑139 (MQ=18)
                                       cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGAGCGGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGGGCCACGGGAGCcacc                                                                                                >  1:5877850/1‑139 (MQ=255)
                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  1:918790/140‑1 (MQ=255)
                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  1:6058994/140‑1 (MQ=255)
                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  1:399513/140‑1 (MQ=255)
                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  2:6148848/140‑1 (MQ=255)
                                         aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGACCGACAGGAGCCACAGGACCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  1:5267575/140‑1 (MQ=255)
                                         aCCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAgg                                                                                              <  1:6652621/140‑1 (MQ=255)
                                              ggAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                         <  2:1488623/140‑1 (MQ=255)
                                              ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTAGCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGAGAGGAGCTCCCGGGGCAGCCGGACCTGCGGGGGCGACGGGCGCCCCAGGGGCtc                                                                                         >  1:4103401/1‑139 (MQ=18)
                                              ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                         <  1:5422816/140‑1 (MQ=255)
                                              ggAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTa                                                                                         <  1:6279804/140‑1 (MQ=255)
                                               gAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGAGCGACAGGAGCTACCGGGGACGCTGGCCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTAc                                                                                        >  1:6462694/1‑140 (MQ=255)
                                               gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGCGCATGCGGTGAAGCTGGAGCAGCCGGAGCGTCGGGAGCGCCCGGAGCTACGGGGGAAGACGGACCAGCCGGGTCCACCGGAGCCACAGGGGcgcc                                                                                        >  2:7430269/1‑137 (MQ=18)
                                               gAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCcaca                                                                                                >  1:210477/1‑132 (MQ=255)
                                                   cctgACAAGCCGCAGCGACAGCAGCTACAGGAGCGACTTGAGATACCGGGTATGCTGGACCAGCTGTCGCGACGGTATCGACAGTAGCTACCGGGGAACCCGGACCAGACGGGGACACGGGAGCCACAGGGGCTACTggg                                                                                    <  1:4739142/137‑1 (MQ=19)
                                                    cGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTgggg                                                                                   >  1:4425030/1‑140 (MQ=255)
                                                          aGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCg                                                                             >  1:1018063/1‑140 (MQ=255)
                                                           gCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCCACAGGAGCTACCGGGGACGCCGGACCACCCGGGGCCACGGGAGCCCCAGGGGCTACGGGGGAAGGCgg                                                                            >  2:2585140/1‑140 (MQ=21)
                                                            ccGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGa                                                                           >  2:6901642/1‑140 (MQ=255)
                                                            ccGGAGCCCCAGGACCCAAAGGAGCCCCAGGAGATACAGGCCAACCCGGACCCCCTGGAGCGCCGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCGACGGGAGCCACAGGGGCTACTGGGGAAGCCGGa                                                                           <  2:176922/140‑1 (MQ=12)
                                                                  cgaccggagcgacaggagcgacaggagCTCCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGcc                                                                     <  1:6957449/140‑1 (MQ=255)
                                                                    acaggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCgg                                                                   <  2:4425030/140‑1 (MQ=255)
                                                                     caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGAAGCCGGACCAGCCGGa                                                                  >  2:4582637/1‑140 (MQ=255)
                                                                     caggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGa                                                                  >  2:628044/1‑140 (MQ=255)
                                                                     caggagcgacaggagcgacaggagcTACCGGGGAAGCAGGACCAGCTGGAGCGACCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGGGCCACAGGAGCCACAGGGGCTACAGGGGGAGACGGACCGGCCGGa                                                                  >  2:205132/1‑140 (MQ=21)
                                                                      aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGCCCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGCAGCCGGCCCAGCCGGAg                                                                 >  1:6196497/1‑140 (MQ=21)
                                                                      aggagcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAg                                                                 >  1:4226909/1‑140 (MQ=255)
                                                                          gcgccaggatcgacaggagcTACCGGGGAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGCACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGAc                                                             <  2:6337174/140‑1 (MQ=21)
                                                                          gcgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGAc                                                             <  1:4331959/140‑1 (MQ=255)
                                                                           cgacaggagcgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGCCGGACCAGCCGGAGCGACa                                                            >  1:3009073/1‑140 (MQ=255)
                                                                           cgacaggagcgacaggagcTACCGGGGAAGCGGGACCCGCAGGAGCGACGGGAGCGACAGGAGCTACCGGTGACGCCGGACCCGCCGGCGCCACGGGAGCCACAGGGGCGAGTGGGGAAGCCGGAGCCGCCGGcgcgccc                                                            >  1:6898541/1‑137 (MQ=18)
                                                                             acaggagcgacaggagcTACCGGGGTCGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTTCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGCGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                          <  1:4065076/140‑1 (MQ=255)
                                                                               aggagccacagcagcTCCCGGGCAAGCGGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACGGGTGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAg                                                        <  2:1258742/140‑1 (MQ=21)
                                                                                    cgacaggagcTACCGGGGACGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                <  2:5057858/111‑1 (MQ=255)
                                                                                    cgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAg                                                                                >  1:5057858/1‑111 (MQ=255)
                                                                                    cgacaggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACGGGCGACGACGCACCAGCCGGCGCGACAGGAGCTAcc                                                   >  2:4032137/1‑140 (MQ=21)
                                                                                       caggagcTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                <  1:3699173/140‑1 (MQ=255)
                                                                                           agcTACCGGGGACGCTGGACCCGCTGGAGCGACGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAg                                            <  2:5268368/140‑1 (MQ=255)
                                                                                             cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCCCAGGGGCTACTGGGGAAGCCGGACCAGCCGGACCGCCAGGAGCTCCCGGGGAAGcc                                          >  2:4543245/1‑140 (MQ=255)
                                                                                             cTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGcc                                          >  2:2597622/1‑140 (MQ=255)
                                                                                              tACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                          <  1:7655136/123‑1 (MQ=255)
                                                                                               aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                                       <  2:5908803/61‑1 (MQ=35)
                                                                                               aCCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGTGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCgg                                        >  1:7407362/1‑140 (MQ=255)
                                                                                                    ggAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACGGGGGAAGACGGACCTGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAccgg                                   >  2:5385183/1‑138 (MQ=18)
                                                                                                     gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGTGCCACCGGAGCCCCAGGGGCTCCGGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTCCCGGGGACGCCGGagcagc                                  >  1:6502934/1‑140 (MQ=18)
                                                                                                     gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGCGACGGCGGACCCGCCGGAGCGACAGGAGCTCGCGGGGACGCCGGACCAGc                                  >  2:5098274/1‑140 (MQ=18)
                                                                                                     gAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACGCGAGCCCCCGGGGCGACAGGGCACGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCGGc                                  >  2:4080576/1‑140 (MQ=14)
                                                                                                        gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                               <  1:2596811/140‑1 (MQ=255)
                                                                                                        gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                               <  1:6370884/140‑1 (MQ=255)
                                                                                                        gCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                               >  2:3495768/1‑140 (MQ=255)
                                                                                                            gACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCg                           <  2:2399167/140‑1 (MQ=255)
                                                                                                                 gCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                      <  1:5315307/140‑1 (MQ=255)
                                                                                                                  cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                     >  1:2293391/1‑140 (MQ=255)
                                                                                                                  cTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCCACGGGAGCCACAGGCGGGTCTGGGGCAGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGa                     >  2:1652673/1‑140 (MQ=14)
                                                                                                                      agtcatgggAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACTGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                 >  1:5634144/7‑124 (MQ=255)
                                                                                                                      agctcccggAGCCACAGGCGCTACCGGCGACGCCGGACCACCCGCGGCCACGGGAGCCACAGGGCCTCCGGGTCAAGCGGGACCAGACGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAGCCGGAGCGACAGGAGCTa                 <  1:7762266/133‑1 (MQ=14)
                                                                                                                      accagccggAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                                        <  2:302449‑M2/28‑1 (MQ=255)
                                                                                                                      aGCGACGGGAGCTACAGGAGCTCCCGGTGAAGCCGGAGCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGAGCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTa                 <  2:3970349/140‑1 (MQ=17)
                                                                                                                      aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGa                                                              <  2:3280283/95‑1 (MQ=255)
                                                                                                                      aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACagcagcaa                 >  1:3126290/1‑138 (MQ=255)
                                                                                                                          aCGGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg             <  2:2791101/140‑1 (MQ=255)
                                                                                                                           cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACggg                                                                                                       >  1:3496184/1‑49 (MQ=255)
                                                                                                                           cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACCGGGGCTACTGGGGAAGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg            <  2:555243/140‑1 (MQ=255)
                                                                                                                           cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTggg                                                                                    <  1:4566463/68‑1 (MQ=255)
                                                                                                                              gAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGccacgggagcc         <  1:1990340‑M2/139‑5 (MQ=255)
                                                                                                                               aGCGACCGGAGCTCCCGGCGACGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACGGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg        <  1:4485029/140‑1 (MQ=17)
                                                                                                                                    cAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa   <  2:3096726/140‑1 (MQ=255)
                                                                                                                                          cTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc                                                             <  2:4744924/76‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                      
GACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCTGGACCAGCTGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAC  >  NZ_CP034943/607399‑607671

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.