BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NZ_CP034943	= 2940996	384 (0.850)	3 (0.010)	3/248	NT	0.78%	coding (83/441 nt)	EO946_RS15155	FixH family protein
*	?	NZ_CP034943	2941000 =	384 (0.860)	3 (0.010)	3/248	NT	0.78%	coding (79/441 nt)	EO946_RS15155	FixH family protein
Rejected: Frequency below/above cutoff threshold.

Only 100 of 412 total aligned reads displayed.

CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTAC  >  NZ_CP034943/2940857‑2941135

cacTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG                                                                                                                                             <  2:6921004‑M1/140‑1 (MQ=255)

cacTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCGTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTG                                                                                                                                             <  1:2509307‑M1/140‑1 (MQ=255)

    tCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGt                                                                                                                                         >  1:6995747/1‑140 (MQ=255)

           ccccTTCCTCGGCATCCGTCACCGCGTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                  <  2:7702502/137‑1 (MQ=255)

           ccACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCt                                                                                                                                  <  1:1778738/140‑1 (MQ=255)

             aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                >  1:1080237/1‑140 (MQ=255)

             aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                >  1:4478603/1‑140 (MQ=255)

             aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                >  1:7588197/1‑140 (MQ=255)

             aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                >  1:6128862/1‑140 (MQ=255)

             aCTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTGCTCCGGGGTTTACTTTGTCAGGGCCAGTCAGCTTGACATCCACTACCTCAGGCGTCTCAGCTGCAGTATTTGCttt                                                                                                                                >  1:5560130/1‑140 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:2098293/140‑1 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:1750933/140‑1 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  2:127625/140‑1 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:3003679/140‑1 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:5091720/140‑1 (MQ=255)

                tCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:4229495/140‑1 (MQ=255)

                    cGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCa                                                                                                                         >  2:2684890/1‑140 (MQ=255)

                         tCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGa                                                                                                                    >  1:6758830/1‑140 (MQ=255)

                           cGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             <  1:4864889/129‑1 (MQ=255)

                           cGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGtt                                                                                                                             >  2:112126/1‑129 (MQ=255)

                           cGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTGCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACCTCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAAc                                                                                                                  >  2:4847863/1‑140 (MQ=255)

                              cACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGc                                                                                                               <  2:3483789/140‑1 (MQ=255)

                                 cGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATc                                                                                                            >  2:2892530/1‑140 (MQ=255)

                                              tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaa                                                                                               >  2:4437961/1‑140 (MQ=255)

                                              tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaa                                                                                               >  2:1516575/1‑140 (MQ=255)

                                              tatGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaa                                                                                               >  1:1562826/1‑140 (MQ=255)

                                                tGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaag                                                                                             <  2:3050748/140‑1 (MQ=255)

                                                   tACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcag                                                                                          >  1:5233195/1‑140 (MQ=255)

                                                     ccGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaa                                                                                        >  2:1988171/1‑140 (MQ=255)

                                                      cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGa                                                                                                                    >  2:7367098/1‑111 (MQ=255)

                                                      cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGa                                                                                                                    <  1:7367098/111‑1 (MQ=255)

                                                      cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGc                                                                                                               <  1:2654563/116‑1 (MQ=255)

                                                      cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaa                                                                                       >  2:6372036/1‑140 (MQ=255)

                                                      cGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaa                                                                                       >  2:7487684/1‑140 (MQ=255)

                                                        ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCCTCCATTAAGCaaaaaagcagaaaaa                                                                                     >  1:1218713/1‑140 (MQ=255)

                                                        ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaa                                                                                     >  1:1317032/1‑140 (MQ=255)

                                                        ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaa                                                                                     >  1:2344932/1‑140 (MQ=255)

                                                        ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaa                                                                                     >  1:7705628/1‑140 (MQ=255)

                                                        ctgctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaa                                                                                     <  2:7096569/140‑1 (MQ=255)

                                                          gctTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCaaaaaagcagaaaaaag                                                                                   >  1:405292/1‑140 (MQ=255)

                                                               atatGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAaaaagcagaaaaaagcagaa                                                                              <  1:7426465/140‑1 (MQ=255)

                                                               atatGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCAAGTCATCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAaaaagcagaaaaaagcagaa                                                                              <  2:2324573/140‑1 (MQ=255)

                                                                    cGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacc                                                                         >  1:3647023/1‑140 (MQ=255)

                                                                     gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                        >  1:4304527/1‑140 (MQ=255)

                                                                     gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                        >  1:5686468/1‑140 (MQ=255)

                                                                     gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                        >  2:511852/1‑140 (MQ=255)

                                                                     gACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaacca                                                                        >  1:7145304/1‑140 (MQ=255)

                                                                       cGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAAcaaccaaa                                                                      >  2:6695518/1‑139 (MQ=255)

                                                                       cGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAG‑ACAACCAACa                                                                     <  2:2132633/140‑1 (MQ=255)

                                                                          tttCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGATGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATc                                                                   >  2:4671266/1‑140 (MQ=255)

                                                                                 ggggTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCa                                                            <  2:4951093/140‑1 (MQ=255)

                                                                                 ggggTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCACGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCa                                                            <  2:884656/140‑1 (MQ=255)

                                                                                       tACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCAt                                                      >  2:3333140/1‑140 (MQ=255)

                                                                                       tACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCAt                                                      <  1:5374429/140‑1 (MQ=255)

                                                                                       tACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCAt                                                      >  1:7258852/1‑140 (MQ=255)

                                                                                        aCTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCTGTATTTGCTTTGTTTTCACCAGAACCGCATCCCTTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATc                                                     >  1:2871146/1‑140 (MQ=255)

                                                                                        aCTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATc                                                     >  1:6199121/1‑140 (MQ=255)

                                                                                         cTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCa                                                    <  2:5005247/140‑1 (MQ=255)

                                                                                                      aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       <  2:6191282/140‑1 (MQ=255)

                                                                                                      aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       <  1:3261371/140‑1 (MQ=255)

                                                                                                      aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       <  1:3830938/140‑1 (MQ=255)

                                                                                                      aGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGATGGAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       <  1:4671266/140‑1 (MQ=255)

                                                                                                      aGTCAGCTTGACATCCAAGACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       <  2:1404008/140‑1 (MQ=255)

                                                                                                       gTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGttt                                      >  2:1703788/1‑140 (MQ=255)

                                                                                                         cAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                    <  2:4205989/140‑1 (MQ=255)

                                                                                                           gCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCt                                  <  2:4304527/140‑1 (MQ=255)

                                                                                                           gCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCt                                  <  2:5686468/140‑1 (MQ=255)

                                                                                                            cTTGACATCCAATACCACAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTa                                 <  2:3611474/140‑1 (MQ=255)

                                                                                                               gACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCTCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                    <  2:6322553/134‑1 (MQ=255)

                                                                                                                  aTCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCg                                         >  1:6881880/1‑126 (MQ=255)

                                                                                                                  aTCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACAAACATCTTTTTCAGGCCATCACCCTTTCATCGTTTACCTAAAtagt                           >  2:4098080/1‑140 (MQ=255)

                                                                                                                    ccAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAAtagtag                         >  2:589550/1‑140 (MQ=255)

                                                                                                                      aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGACCAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       >  2:2750417/1‑140 (MQ=255)

                                                                                                                      aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGtt                                       >  1:1664363/1‑124 (MQ=255)

                                                                                                                      aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       <  1:6419553/140‑1 (MQ=255)

                                                                                                                      aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       >  2:4569035/1‑140 (MQ=255)

                                                                                                                      aaTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       >  2:1032782/1‑140 (MQ=255)

                                                                                                                       aTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAATCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCaa                      <  2:5460387/140‑1 (MQ=255)

                                                                                                                       aTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCaa                      <  2:2637646/140‑1 (MQ=255)

                                                                                                                       aTACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCaa                      <  2:6128862/140‑1 (MQ=255)

                                                                                                                       aTACCTCAGGCGTATCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGAAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCaa                      <  2:1820062/140‑1 (MQ=255)

                                                                                                                             cAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCtt                >  2:2459300/1‑140 (MQ=255)

                                                                                                                             cAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATACATTAAGCAAAAAAGAAGAAAAAAGCAGAACAACCAAAATATTTTTCATGCCATCACACTTTCAGAGTTTAACTAAAAATTAGAAAACGCtt                >  2:3927387/1‑140 (MQ=255)

                                                                                                                              aGGCGTCTCAGCTGCCTTTTTTGCTTTGTTTTCACCAGAACGGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACACCCAACATCTTTTTCATGCCATCACCCTTTCATCGTGTACCTAAATAGTAGCAAACGCTTa               <  2:6502554/140‑1 (MQ=255)

                                                                                                                              aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCttt                                              <  1:6602339/109‑1 (MQ=255)

                                                                                                                              aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTAc                                    >  1:3367919/1‑119 (MQ=255)

                                                                                                                              aGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTa               >  1:5958176/1‑140 (MQ=255)

                                                                                                                                gCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACa             <  1:6273889/140‑1 (MQ=255)

                                                                                                                                  gTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGc           <  2:1317032/140‑1 (MQ=255)

                                                                                                                                  gTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGc           <  2:5560473/140‑1 (MQ=255)

                                                                                                                                    ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       <  1:833633/126‑1 (MQ=255)

                                                                                                                                    ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCa                       >  2:833633/1‑126 (MQ=255)

                                                                                                                                    ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaa         >  2:1607983/1‑140 (MQ=255)

                                                                                                                                    ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaa         >  1:885216/1‑140 (MQ=255)

                                                                                                                                    ctcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaa         >  2:3242695/1‑140 (MQ=255)

                                                                                                                                     tcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGt                                        >  1:1863576/1‑108 (MQ=255)

                                                                                                                                     tcAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCaaa        >  1:5174790/1‑140 (MQ=255)

                                                                                                                                       aGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATg      <  2:7133989/140‑1 (MQ=255)

                                                                                                                                         cTGtatttgctttactttcaccagatccgcatccattaagcaataaagcagaaaaaagcagaacaaccaacacctttttcatgccatcaccctttcatcgtttacctaaatagtagcaaacgcttacagcaaatggtaca    <  1:3422‑M1/140‑138 (MQ=255)

                                                                                                                                           gtatttgctgtgtgttcaccagaaccgcatccattaagcaaaaaagcagaaaaaagcagaacaaccaacatctttttcatgccatcaccctttcctcgtttacctaaatagtagcaaacgcttacagcaaatggtacata  <  1:5831700‑M1/140‑140 (MQ=255)

CACTTCAAACTCCACTTCATCGGCATCCGTCACCGCTTCGTCACCATATGATACCGCTGCTTCATATGCGACGCTTTCTCCGGGGTTTACTTTTTCAGGGCCAGTCAGCTTGACATCCAATACCTCAGGCGTCTCAGCTGCAGTATTTGCTTTGTTTTCACCAGAACCGCATCCATTAAGCAAAAAAGCAGAAAAAAGCAGAACAACCAACATCTTTTTCATGCCATCACCCTTTCATCGTTTACCTAAATAGTAGCAAACGCTTACAGCAAATGGTAC  >  NZ_CP034943/2940857‑2941135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.