| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 3,299,548 | T→G | 6.8% | intergenic (‑246/+63) | EO946_RS17065 ← / ← gap | phosphoglycerate kinase/type I glyceraldehyde‑3‑phosphate dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 3,299,548 | 0 | T | G | 6.8% | 1180.3 / 4.0 | 480 | intergenic (‑246/+63) | EO946_RS17065/gap | phosphoglycerate kinase/type I glyceraldehyde‑3‑phosphate dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (161/245); new base G (55/2); total (233/247) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.51e-18 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 497 total aligned reads displayed.
GGGCAGTTCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAG > NZ_CP034943/3299410‑3299687 | gggCAGTTCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTGTATCACACAACCTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCccctt > 1:2735657/1‑140 (MQ=255) ggCAGTTCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGTGGCGATCACAGAACGTTTTGTGGAAGCCGGTCTTCATTGAAAAAGGGAAAGGGAGTGCGGCcccgtc > 1:667636/1‑140 (MQ=255) ggCAGTTCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCcccttc > 1:6205813/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTGGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCGATCACCGAACGGTTTGTGAAACCCGGTCTTCAAGGAAAAAAGGCAAGGGAGTCcgtccccgtcccggg > 1:2427339/1‑137 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTGTCTATCACAGAACGTTTTGTGAAAGCCGGTCTTAATGGAAAAATGGAAAGGGAGTCCGTCCCCGTCCCGTg > 1:3550920/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTg > 2:4020405/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTg > 2:162405/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCGATAACATAACGGTTTGTGAAAGCCGGTGTTGATGGAAAAATGGCAAGGGAGTCCGTCCCCGTCCCGTg > 1:6988640/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCGACCACAGAACGTTTTGTGAAAGCCGGTCTTCATGGAAAAATGGAAAGGGAGTACGTCCCCTTCCCTTg > 1:4567975/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTATCTATAACAGAACGTTTTCTTAAAGCCGGTGATGATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCGTg > 1:7457849/1‑140 (MQ=255) ttCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGTCTCTATCACAGAACGTTTTATGAAAGCCGGTGTTCATGGTAAAAGGGAAAGGGAGTCCGTCCCCGTCCCGTg > 1:3757670/1‑140 (MQ=255) cGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTc < 2:30964/140‑1 (MQ=255) cTGAAGCCAGGGCCGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGGCGTTTCACTATCACCGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGc < 1:3620613/140‑1 (MQ=255) cTGAAGCCAGGGCAGCGGCCTTATTATTAATCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATAACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGc > 2:482729/1‑140 (MQ=255) cTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTGTCTATCACAGAAAGTTTTCTGAAATCCGGTGTTGATGGAAAAATGGAAAAGGAGTCCCTCCCCGTGCCTTGTCCGc > 1:1003032/1‑140 (MQ=255) cTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACATAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGGCCCCTTCCCATGTCCGc > 2:1812992/1‑140 (MQ=255) cTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGc < 1:6096398/140‑1 (MQ=255) tGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCt < 1:7680329/140‑1 (MQ=255) gAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCtt < 2:7629788/140‑1 (MQ=255) aaGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGCGTCCGTCCCCTTCCCTTGTCCGCttt < 1:5682575/140‑1 (MQ=255) gCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTGTATAACACAACGTTTTATGAAAGCCGGTCTTCATGGAAAAAGGGAGACGGAGTCCGTGCCCGTCCCGTGTCCGCtttga > 1:2893871/1‑138 (MQ=255) gCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTGTGAAAGCCGGTCTTCATTGAAAAAGGGAAAGGGAGTGCGTCCCCGTCCCGTGTCCGCTTTCa > 1:3267783/1‑140 (MQ=255) ccAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCAt < 1:7542075/140‑1 (MQ=255) ccAGGGCAGCCGCCATACGCGAACGCGCCGGCAAAGCAGCTAAAACCCCGGTCGTTTCTCTATCACAGAACGTTTTCAGAAAGCCGGTCTTCATGGAAAAAGGCAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCAt < 1:4253190/140‑1 (MQ=255) aGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTGCCCTTCCCTTGTCCGCGTTCATta > 2:1906735/1‑140 (MQ=255) aGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTACGTCCCCTTCCCTTGTCCGCTTTCATta > 2:810905/1‑140 (MQ=255) ggCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTGTGTATCACAGAAAGTTTTATGTAAGCCGGTGTTGATTGTAAAATGGGAAGGGCGTGCGTCCCCGTCCCGTGTGCGCTTTGATtatt > 1:4995376/1‑139 (MQ=255) gCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAg < 2:3184307/140‑1 (MQ=255) gCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAg < 2:2661284/140‑1 (MQ=255) cGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTGTGTATGACACTACGGTTTGTGAAAGCCCGTGTTCATGG‑AAAAGGGAAAGGGAGTCCGTCCCCGTCCCGTGTCCGCTTTCTATATATCGCtt > 1:584376/1‑140 (MQ=255) cGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATAAAACAACGTTTTATGAAAGCCCGTCTTCAATGAAAAAAGGAAAGGGAGTCCGTCCCCGTCCCGTGTGCGCTTTAATTATATCGCt > 1:3054585/1‑140 (MQ=255) cGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTAACACAGAACGTTTTCTGAAAGCCGGTCTTCATTGAAAAAGGGAAAGGGAGTCCGTCCCCGTCCCTTGTCCGCTGTCATTATAGCGCt > 2:7498377/1‑140 (MQ=255) ccTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCttat > 2:3568290/1‑138 (MQ=255) cGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGATTTCATTATAGCGCTTCTATTCaaa < 1:5426673/140‑1 (MQ=255) cGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAAAGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCaaa < 1:2233635/140‑1 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTGATGGAAAAAGGGAAAGGGAGTACGTCCCCATCCCGTGTGCGCTTTCATTATAGCGCTTCTATTCAAAAGa > 2:2401989/1‑140 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTATTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCGTCCCTTGTCCGGTTTGATTATATCGCTTCTATTCAAAAGa > 2:5428399/1‑140 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATAACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGa > 2:7343813/1‑140 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATAAAAGAACGTTTTGTTAAATCCGGTCTTCATTGAAAAAGGGAAAGGGAGTCCGTCCCCGTCCCGTGTCCGCTTTCATTATATCGCTTATAATAaaaaaa > 1:4110738/1‑138 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGTCTCTATCACACAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCGTTCAGTATATCGCTTCTATTCACAAGa > 2:7187170/1‑140 (MQ=255) aaGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTGAGTCTAGAACAGTACGTTTTCTGTAACCCGGTCTTCATGGGAAAAGGGAAAGGGCGTGCGGCCCCTGCCCTTGGCGGCTTTGATTATAGCGCGTGTATTCAAAAGa > 2:2254259/1‑140 (MQ=255) gcgcCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAAc < 1:1097462/140‑1 (MQ=255) ccGGCAAAGCTGCTAAAAACGCGGTCGTTTGTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATTGAAAAAGGGAAAGGGCGTCCCTCCCCTTCCCTTGTCCGCTTTCATTAAAGCGCTTCTATTAAAAATAACCaa > 2:6628854/1‑140 (MQ=255) ccGGCAAAGCTGCTAAAAACGCGGTCGTTTGTCTATCACAGAAAGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCGTCCCTTGTCCGCTTTCATTATAGCGCTTCGATTCAAAAGAACCaa > 2:4426982/1‑140 (MQ=255) cGGCAAAGCTGCTAAAAACGCGGTCGTTTGTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTACGTCCCCTTCCCTTGTCCGCTTTAATTATAGCGCTTCTATTAAAAAGAACCaaa > 2:4360913/1‑139 (MQ=255) cGGCAAAGCTGCTAAAAACGCGGTCGTTTGGCTATCAAAGAACGTTTTCTGAAACCCGGTCGTGCTGGAAAAATGGAAAGGGAGTCCGTCCCCTGCCCTTTTGCGCGTTGCTTATAGCGCGTCTATTAAAAAgctgtctc > 2:57132/1‑133 (MQ=255) cGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATACCATAACGTTTTCTGAAAGCCGGGCTTCATTGAAAAAGGGAAAGGGCGTCCGTACCCATACCGTGTCCGCTTTAAATATATCGCTTCTATTCAAAAGAACCAAg > 2:5123729/1‑140 (MQ=255) cGGCAAAGCTGCTAAAAACGCGGTCGTGTGTCGATACCACAACCTTTTGTGTAAGCCGGGCGGCATGGTAAAAAGGACACGGAGTCCGGCCCCCTCCCGTGTGCGCGGTCATTATAGCGCTTCTATTAAAAAGAACCAAg > 1:2102020/1‑140 (MQ=255) ggCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGt < 2:3783284/140‑1 (MQ=255) gCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTc < 1:4468092/140‑1 (MQ=255) aGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTATTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGt < 2:4917212/140‑1 (MQ=255) gctgctAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGGTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTc < 2:6294618/140‑1 (MQ=255) gctgctAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTc < 2:2525990/140‑1 (MQ=255) aaaaaCGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCtat < 1:6570167/140‑1 (MQ=255) tATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCttttttt < 1:2333792/140‑1 (MQ=255) tATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCttttttt < 2:7399857/140‑1 (MQ=255) aTCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTg < 2:5031070/140‑1 (MQ=255) cacaGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCg < 2:4638484/140‑1 (MQ=255) cacaGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCg > 1:5531758/1‑140 (MQ=255) cacaGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCg < 1:3155690/140‑1 (MQ=255) acaGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGa < 1:1816469/140‑1 (MQ=255) gAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGt < 1:917546/140‑1 (MQ=255) gAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGt < 2:3306879/140‑1 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATCAATTAAAGACCTTTTTTTGCGATGTa > 2:2832788/1‑140 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCttttttt > 1:6329303/1‑132 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTa > 1:1738789/1‑140 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTa < 1:4634236/140‑1 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTa < 2:533857/140‑1 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTa > 1:806777/1‑140 (MQ=255) aaCGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCAATATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATCAATTAAAGACCTTTTGTTTCGATGTa > 2:2141321/1‑140 (MQ=255) cGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAg > 1:4838773/1‑140 (MQ=255) cGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAg > 1:1505716/1‑140 (MQ=255) ttCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCTCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGc < 2:1093623/140‑1 (MQ=255) ttCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCACAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTGTGCGATGTAAGCTGc < 2:6069647/140‑1 (MQ=255) tCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCa < 1:5591210/140‑1 (MQ=255) tCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGGCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCa < 2:4471648/140‑1 (MQ=255) ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCCGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa < 2:590056/140‑1 (MQ=255) ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa < 1:3320314/140‑1 (MQ=255) ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa < 1:1960882/140‑1 (MQ=255) ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa < 1:7343813/140‑1 (MQ=255) ggTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTcaacaa < 2:2950010/140‑1 (MQ=255) gTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCaacaac < 2:5217567/140‑1 (MQ=255) gTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCaacaac < 2:3002355/140‑1 (MQ=255) gTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCaacaac < 2:4170813/140‑1 (MQ=255) cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCCAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt < 2:3859979/140‑1 (MQ=255) cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt > 1:1611366/1‑140 (MQ=255) cATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGt < 1:1255042/140‑1 (MQ=255) aaaaGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGt < 2:1746788/140‑1 (MQ=255) aagggaaagggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAg < 1:3903259/140‑1 (MQ=255) agggaaagggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGc < 2:1224368/140‑1 (MQ=255) agggaaagggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGc < 2:701189/140‑1 (MQ=255) agggaaagggaGTCAGTCCCCTTCCCTTGTCCGCTTTAATTATAGCGATTCTATTCAAAAGAACAAATTCAGGTCAGCTATAAATTAAAGACCTTTTTTTGCGTTGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGc < 2:1468677/140‑1 (MQ=255) agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt < 1:2534970/140‑1 (MQ=255) agggaGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCttt > 1:5077532/1‑140 (MQ=255) gtccgtccCCTTCCCGTGTCCGCTTTCATTATAGCGCTTCTATGCAAAAGAACCAAGTCAGGTCCGCGCGAAATTAAAGACCTTTTTGTGCGATGTACGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGttc > 1:5198422/1‑139 (MQ=255) tccgtccCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTAt > 2:3662630/1‑140 (MQ=255) tccgtccCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTAt > 1:6793337/1‑140 (MQ=255) cttcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCaa > 1:5947059/1‑140 (MQ=255) ttcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAg > 1:7168616/1‑140 (MQ=255) ttcccttGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACATTTTTTTGCGGTGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAg > 1:1353633/1‑140 (MQ=255) | GGGCAGTTCGTCTGAAGCCAGGGCAGCGGCCTTAGGCGTAAGCGCCGGCAAAGCTGCTAAAAACGCGGTCGTTTCTCTATCACAGAACGTTTTCTGAAAGCCGGTCTTCATGGAAAAAGGGAAAGGGAGTCCGTCCCCTTCCCTTGTCCGCTTTCATTATAGCGCTTCTATTCAAAAGAACCAAGTCAGGTCCGCTATAAATTAAAGACCTTTTTTTGCGATGTAAGCTGCAAGGTCAACAACGCGGTTAGAGTAGCCGCTTTCGTTATCGTACCAAG > NZ_CP034943/3299410‑3299687 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |