| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 438,766 | G→T | 5.1% | intergenic (‑32/‑74) | gabR ← / → gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 438,766 | 0 | G | T | 5.1% | 1042.2 / 8.8 | 370 | intergenic (‑32/‑74) | gabR/gabT | transcriptional regulator GabR/4‑aminobutyrate‑‑2‑oxoglutarate transaminase |
| Reads supporting (aligned to +/- strand): ref base G (219/118); new base T (2/31); total (221/149) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.67e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 370 total aligned reads displayed.
TGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTC > NZ_CP034943/438628‑438902 | gtgtCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGtt < 2:4634485/140‑1 (MQ=255) gtgGCAGCAGATTACGGCTGAGAATTTCTTTTTTTCGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGtt < 2:4887721/140‑1 (MQ=255) gtgGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGtt < 1:3930184/140‑1 (MQ=255) gtgGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGtt < 2:2736452/140‑1 (MQ=255) agcaagaagATAACGGCTGAGAATTTCTTTTTTAAGTAAATGATAAATTTGATGATATAAATAATCGGCTTCTTCTTAGAGGTCTAGATTCAATGTGATGACAATTTGAATATTCTCCTTCTGGTACAATCAAAAAGTta > 2:5238023/8‑140 (MQ=255) ggCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGTCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTAAAATCAAAAAGTtat > 1:6362197/1‑140 (MQ=255) ggCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTtat > 2:3880290/1‑140 (MQ=255) ggCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTtat > 1:3543223/1‑140 (MQ=255) ggCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTtat > 1:240023/1‑140 (MQ=255) gcagATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAAtt < 1:1784072/140‑1 (MQ=255) cagATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTg > 2:4519844/1‑140 (MQ=255) agATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTgg < 2:3684075/140‑1 (MQ=255) tACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACt > 2:328079/1‑140 (MQ=255) tACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACt > 2:4309975/1‑140 (MQ=255) cGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACttt > 2:6421706/1‑140 (MQ=255) cTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTtca > 1:4612301/1‑140 (MQ=255) gagaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTAGCATCAAAAAGTTATAATTGGTACTTTtcatc > 1:3083199/1‑140 (MQ=255) gagaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTtcatc < 1:7383051/140‑1 (MQ=255) gagaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTtcatc < 1:615692/140‑1 (MQ=255) agaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATCATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAACAGTTATAATTGGTACTTTtcatca > 1:2598284/1‑140 (MQ=255) agaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAACAAGTTATAATTGGTACTTTtcatca > 2:4790941/1‑140 (MQ=255) agaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGtt < 1:5025963/120‑1 (MQ=255) agaATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTtcatca > 1:7334247/1‑140 (MQ=255) tttttAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAaag > 1:2252298/1‑140 (MQ=255) ttttAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAaaga < 2:5011686/140‑1 (MQ=255) ttttcGCTAAATTTGCTGATAGATAGAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAACAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAg < 1:7762234/140‑1 (MQ=255) ttttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGa < 2:7334247/140‑1 (MQ=255) tttGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGaa < 2:6995828/140‑1 (MQ=255) tAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTa < 2:6355147/140‑1 (MQ=255) tatagataTAATCGGTTTTTTTTTAGGGGTCGAGTTTTAATTTGTTGTCAATTTGAATATTCTCCTTCTGGTACAATAAAAAATTTATAATTGGTACTTTTCATAATACCAAAAATAATTCACATTGGTAAGAAAATAGc < 2:2840530/139‑1 (MQ=255) gttagctaTATTCGGAGTGTTCTGTGCGGTCGAGTGTGTTGTTGTTGTCCATTTGAAGTTTCTCGTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATCCCAAAAATATGTCAGAATGGTAAGAAAATCGc < 2:1907842/138‑1 (MQ=255) tatatatAATCGGCTTTTTCTGTGCGGTGGAGTGTGAATGTTTTGTCCTTTTGCTTATTGTCATTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAACAAGTAAGATTGGTAAGAAAATAGCGa < 2:4908770/137‑1 (MQ=255) tatatatAAGGGGTTTGGTCTGAGGGGGCGAGTGTGAATTTTATGGCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAATAAGTCAGAATGGTAAGAAAATCGCGa < 2:4067952/137‑1 (MQ=255) agaaaTAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTAAATAATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGCGAc < 2:7053918/140‑1 (MQ=255) tatatAATCGGGTTTTTCTGAGGGGTCTTGTGTGAATGTTATTTCCATTTGCAGTTTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACa < 2:7183348/139‑1 (MQ=255) gataTAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACa > 2:5904366/1‑140 (MQ=255) atttaATCGGCTTTTTCGGAGCGTTCGAGTGTGAATGTGATGTCCTTTTGCCTATTCTCCTTCTGTTACCATCAAAAATTTATAATTGGTACTTTTCATAATACCAAAAATAAGTCATATTGGTAAGAAAATAGCGACAg < 2:605265/137‑1 (MQ=255) atatAATGGGGTTGTTGTGCGCGGTCGCGTGTGATTTTGATGTCCATTTGCATATTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAg < 2:6723620/140‑1 (MQ=255) atatAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAg > 2:3764366/1‑140 (MQ=255) ataATCGGCTTGTTCTGAGCGGTCGAGTGTGAATTTGATGTCCATTTGAAGATTCTCCTTCTGGTACAATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAggg < 2:2026865/140‑1 (MQ=255) tCGGCTTGTTCTGTGCGGTCGAGTGTGAATGTGATGTCATTTTGCAGTTTCTCTTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAATTCAGAATGGTAAGAAAATAGCGACAGGGGGAc < 2:1508932/140‑1 (MQ=255) tCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAATTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGAc > 2:1816158/1‑140 (MQ=255) ggCTTGTTCTGAGCGGTCGAGTTTGAATGTTATGTCAATTTGCAGATTCTCCTTCTTGTAACATAAAAAATTTTTAATGGGTACTTTTCATCATACAAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACAt < 2:7545973/140‑1 (MQ=255) gCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAAAAGCGACAGGGGGACATa > 1:5665938/1‑140 (MQ=255) cTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATAc > 1:7634935/1‑140 (MQ=255) ttGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACg > 2:2519466/1‑140 (MQ=255) ttcgtGAGCGGTCTTGTTTCATTGTGATGCCATTTTGCAGATTCCCCTTCGGGACCCAAAAAAATTTTATATTTGGAACTTTAAAACACCCAAAAAAGAAGTCAGATTGGTAACAAAATAGCGACAGGGGGACATACGCa < 1:3261235/136‑1 (MQ=255) ttCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGCCATACGCAt > 2:789775/1‑140 (MQ=255) tGAGGGGTCGAGTGTGATTGTGATGTCCTTTTGCAGATTCTCCTTCTGGTACAATAAAAAATTTATATTTGGTACTTTTCATCATACCAAAAAGAAGTCATAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAg < 2:1233180/140‑1 (MQ=255) tGAGCGGTCGTGTGTGAATGTGCTGTCAATTTGCATTTTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAg < 2:2412664/140‑1 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:5550589/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:661609/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 1:361424/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTc > 2:4828506/1‑140 (MQ=255) aGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATCAGTc > 2:4431539/1‑140 (MQ=255) gCGGTCGTGTGTGATTTTTATGTCCTTTTCCATATTATCCTTCTGGTACAAAAAAAATTTTATATTTGTTAGTTTTAAACAAACAAAAAATAATTCACATTGTTAACAAAAAAGCGACAGGGGGACATACGCATGAGTCa < 1:678870/140‑1 (MQ=255) gTCGAGTGTTAATGTGTTGTCATTTTGCATATTCTCCTTCTGTTACCATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaac < 2:1140584/140‑1 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:1006611/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:4723703/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:1382961/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:4425711/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:2096911/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 1:2691063/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTAATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAaaca > 2:3935905/1‑140 (MQ=255) tCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCGGGTACCATCAAAAAGTTCTAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAAGGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAatca > 1:825095/1‑140 (MQ=255) attgtgAATGTGATGTCCTTTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGACTGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAacaaca < 2:7687942/138‑1 (MQ=255) tttattgtgATGTCCTTTTGCATTTTCTCCTTCTGGTACAATCAAAATTTTATATTTGGTATTTTTCATCATACCAAAAAGAAGTAATATTGTTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:5998099/135‑1 (MQ=255) gttattttgATGTCCATTTGCAGATGCTCCTTCTGTTACAATAAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:3543220/133‑1 (MQ=255) gttattgtgATGTCCATTTGCATTTTCTCCTTCTGGTACCATAAAAAATTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 2:661609/135‑1 (MQ=255) gttattgtgATGTCATTTTGCTTATTCTCCTTCTGTTAACATAAAAATTTTATATTTGGTATTTTTAAAAATACAAAAAATAAGTCAGAATGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagca < 1:88771/135‑1 (MQ=255) aTGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACagcaagca > 2:4037328/1‑140 (MQ=255) gtgATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATc > 2:915978/1‑140 (MQ=255) ttaTGTCATTTTGAAGATTCTCCTTCTGTTACCAAAAAAAAGTTATAATTGGTACTTTTCATCATACAAAAAAGAAGTCAGAATGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCa < 1:4309975/138‑1 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAgggg > 1:4853521/1‑104 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 2:3166114/1‑140 (MQ=255) aTGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACg > 1:5231815/1‑140 (MQ=255) gTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGAc > 1:1237851/1‑140 (MQ=255) gTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGAc > 1:3394179/1‑140 (MQ=255) cgtttGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGc > 1:5505031/3‑140 (MQ=255) cATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTCAGAAAATAGCGACACGGGGACATACGCATGAGTCAAACAACACCAAGCATCACGACttc > 2:6180431/1‑138 (MQ=255) cATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACACCAGCAAGCATCACGACTGc > 1:6947918/1‑140 (MQ=255) cATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGAGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGc > 2:4228587/1‑140 (MQ=255) cATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTATTCATCATACCAAAAAGAAGTAAGAATGGTAAGAAAATAGCGACAGGGGTACATACTCATGAGTCAAACAACAGCAAGCATCACGACTGc > 2:5091015/1‑140 (MQ=255) ttGCATTTTCTCCTTCTGGTACCATAAAAAAGTTATAATTGGTACTTTTCATCATCCAAAAAAGAAGTCAGAATGGAACGAAACTAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCa < 2:3017405/140‑1 (MQ=255) tctcCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAATTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAAAAGAAAGCATCACGACTGCCCAGTGgcaga > 2:1274172/1‑139 (MQ=255) tcCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCaa > 2:1708340/1‑140 (MQ=255) cTGGTACCAACAAAAAGTTATATTTGGTACTTTTCATCAGACAAAAAACACGTCAGACTGGAAAGAAAATCGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACg < 1:2856856/140‑1 (MQ=255) tGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCCTGAGTCCAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACgg > 1:1530229/1‑140 (MQ=255) gTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGa > 2:2637361/1‑140 (MQ=255) gTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGa > 2:6810229/1‑140 (MQ=255) aCCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGc > 2:1037741/1‑140 (MQ=255) caaaaaaaaTTTATAATTGGTACTTTCCATCAACCCAAAAATAACTCAGACGGGAACGAAAAGAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCaa < 1:2978525/136‑1 (MQ=255) cATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAGAGAAGTCAGAATGATAAGAAAATACCGACAGGGGGATATTCACATGAGTCAAACAACAGCAAGCATCACAACTGCACAATGGCAGCAAAAACGGGATCaa > 2:5365195/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAAtt > 2:2918230/1‑140 (MQ=255) tCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATCCGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAACCGGGAGCCAtt > 2:6303766/1‑140 (MQ=255) cAAAAATTTATAATTGTTACTTTTCAAAATACCAAAAAGAAGTAAGATTGGTAACAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 1:3734283/140‑1 (MQ=255) aaaaaaGTTATATTGGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:2208940/139‑1 (MQ=255) aaaaaaGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCATAATGGTAATAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 2:578632/139‑1 (MQ=255) aaaaaaGTTATAATTGGTACTTTACATCATACCAAAAATAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTc < 1:1496605/139‑1 (MQ=255) aaaGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGtc > 1:6915287/1‑140 (MQ=255) | TGTGGCAGCAGATTACGGCTGAGAATTTCTTTTTTTAGTTTTTGATAAATTTGCTGATAGATATAATCGGCTTGTTCTGAGCGGTCGAGTGTGAATGTGATGTCCATTTGCAGATTCTCCTTCTGGTACCATCAAAAAGTTATAATTGGTACTTTTCATCATACCAAAAAGAAGTCAGAATGGTAAGAAAATAGCGACAGGGGGACATACGCATGAGTCAAACAACAGCAAGCATCACGACTGCCCAGTGGCAGCAAAAACGGGAGCAATTCGTC > NZ_CP034943/438628‑438902 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |