BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,359	A→C	10.0%	T68P (ACC→CCC)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,359	0	A	C	10.0%	667.0 / 9.6	341	T68P (ACC→CCC)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base A (135/148); new base C (3/45); total (141/200)
Fisher's exact test for biased strand distribution p-value = 6.90e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 347 total aligned reads displayed.

GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGG  >  NZ_CP034943/607221‑607498

    cGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACCGGAGCCACGGGAGCTACCGGGGACGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGCACCAGCCGGACCAACCGGa                                                                                                                                        >  1:2089252/1‑140 (MQ=255)

     gggAGCTACTGGGGAAGCTGTACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGTAGCGACGGGAGCGACAGGAGATACCGTCGAAGCCGGACCAGCCGGACAAACCGGAg                                                                                                                                       >  1:3528262/1‑140 (MQ=18)

          cTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACg                                                                                                                                  <  1:6380439/140‑1 (MQ=255)

           tACTGGGGCAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACgg                                                                                                                                 <  2:6694832/140‑1 (MQ=255)

           gaCTGGCGAACCAGGCCCAGCCGGACCAGCCGGAGCCACCGGAGCCACGGGAGCTCCCGGGGAACCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACgg                                                                                                                                 <  2:307134/139‑1 (MQ=18)

            aCTGGGGAAGATGGACCAGCCGGACCTGCCGGAGCCACGGGAGCCACGGGAGCTACCGGGGAAGCGGGACCAGCCGGCGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACggg                                                                                                                                <  2:6125315/140‑1 (MQ=18)

             cTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACAGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGCCCGCCGCACCAGCCGGACCCTCCGGAGCGCCgggg                                                                                                                               >  1:1798997/1‑139 (MQ=18)

                gggAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCTCAGCCACGGGAGcc                                                                                                                            >  2:6988732/1‑140 (MQ=255)

                   aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACg                                                                                                                         <  1:485203/140‑1 (MQ=255)

                   aaGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACg                                                                                                                         <  1:5041965/140‑1 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       >  2:455139/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       >  2:1314920/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       <  1:7609766/140‑1 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACggg                                                                                                                       >  2:679252/1‑140 (MQ=255)

                     gCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACAGGAGCGACGGGAGCCACggg                                                                                                                       >  1:6342559/1‑140 (MQ=255)

                       ttgaccagccggaccagccgGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCCACCGGCGCGACAGGAGCTCCCGGGGAACCCGCACCAACCGGACCGACCGAACAGACGGGAGCCAccgccg                                                                                                                     >  2:3939236/3‑135 (MQ=17)

                       tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGCGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAg                                                                                                                     <  2:3837324/140‑1 (MQ=255)

                       tGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                     >  2:1202781/1‑140 (MQ=255)

                       cggaccagccggaccagccGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAACCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAg                                                                                                                     <  2:2252386/139‑1 (MQ=255)

                          accagccggaccagccggAGCGACGGGAGCCACGGGAGCTCCCGGGGCAGCAGGACCAGCCGGAGCGACGGGAGCGCCTGGAGCTACCGGGGCAGCCGGACCAGCCGGAGCGTCCGGAGCGACCGGGGCCCCGGGGGcgc                                                                                                                  >  1:5388278/1‑138 (MQ=17)

                           ccagccgtaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCGAc                                                                                                                 <  2:7722131/140‑1 (MQ=255)

                               ccggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCCACGGGAGCGACGGGGGCTCCCggg                                                                                                             >  1:1881477/1‑140 (MQ=18)

                                cggaccagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCgggg                                                                                                            <  1:7059398/140‑1 (MQ=255)

                                   accagccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGCGAAGCCGGCCCAGCCGGACCAACCGGAGCGACGGGAGCAACGGGAGCTACCGGGGAag                                                                                                         >  2:1830695/1‑140 (MQ=255)

                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTCCCGGGGAagccgga                                                                                                    <  1:6212425/140‑1 (MQ=255)

                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCGACCGGAGCGACggg                                                                                                                                >  1:7145287/1‑112 (MQ=255)

                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccgga                                                                                                    <  2:6301056/140‑1 (MQ=255)

                                        ccggaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCAGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGACCAACCGGAGCGACCGGCGCCACGGGAGCTACCGGGGAagccgga                                                                                                    >  1:5068479/1‑140 (MQ=255)

                                           gaGCGACGGGAGCCACGGGAGCTACCGGGGACGCGGGACCAGCCGGAGCGAGGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggacca                                                                                                 <  1:5120384/140‑1 (MQ=255)

                                           gaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggacca                                                                                                 <  1:5858610/140‑1 (MQ=255)

                                           gaGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggacca                                                                                                 <  1:3996740/140‑1 (MQ=255)

                                            cgCGACGGGATCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                                <  1:5943984/139‑1 (MQ=255)

                                            aGCGTCGGGAGCCACTGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                                <  1:4668669/140‑1 (MQ=255)

                                            aGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccag                                                                                                <  2:826474/140‑1 (MQ=255)

                                                  gggAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccggac                                                                                          <  1:3586606/140‑1 (MQ=255)

                                                      gCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCCCGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCAc                                                                                      >  1:3464847/1‑140 (MQ=255)

                                                      gCCACGGGAGCTACCGGCGAAGCTGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAc                                                                                      <  2:4955435/140‑1 (MQ=255)

                                                       ccACTGGAGCTACCGGGGAAGCTGGACCTGCCGGAGCGACGCGAGCCACAGGAGCTACCGGGGAAGCGGGACCAGCCGGTCCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAAcc                                                                                     <  2:1977831/140‑1 (MQ=14)

                                                       ccACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCACGGGAGATACCGCGCAAGCCGGACCAGCCGGACCAccc                                                                                     >  1:258998/1‑140 (MQ=18)

                                                         aCGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCgg                                                                                   <  2:110105/140‑1 (MQ=255)

                                                               gCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCggagcgac                                                                             <  2:8996/140‑1 (MQ=255)

                                                                cTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgaca                                                                            >  1:625387/1‑140 (MQ=255)

                                                                 tACCGGGGAAGCTGTACCAGCAGGAGCGACGTGAGCGACAGGAGCTACCGGGGAAGACGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACAGGGCAAGACGGACAATCAGGAGCAAAAgtagcgacag                                                                           >  2:4739142/1‑140 (MQ=17)

                                                                 tACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacag                                                                           >  2:2827270/1‑140 (MQ=255)

                                                                 tACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCCACGGGAGATACCGGGGAAGCCGGACAAGCCGGACCACCCggagcgacag                                                                           >  2:1938738/1‑140 (MQ=255)

                                                                  aCCGGGGAAGAAGGACCAGCCGGAGGGACGGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCACCCggagcgacagg                                                                          <  1:1433707/140‑1 (MQ=18)

                                                                    cGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggag                                                                        <  1:4905722/140‑1 (MQ=255)

                                                                     ggagAAGCAGGACCAGCCGGAGCGCCGGGAGCCACCGGAGCCACCGGGGCAGCCGGACCAGCCGGACCAACCGCAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagc                                                                       <  2:592051/137‑1 (MQ=14)

                                                                       ggAAGCTGGACCAGCCGGAGGGACGGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcga                                                                     <  1:4373278/140‑1 (MQ=255)

                                                                        gcaGCTGGACCAGCCGGACCTACGGGAGCGAGAGGAGCTACCGGGGAACCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagggacaggagcgac                                                                    <  2:7248687/138‑1 (MQ=17)

                                                                        gAAGCTGGACCAGCGGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                    <  2:742633/140‑1 (MQ=255)

                                                                          aGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCACCCGGAGCAACCggagcgacaggagccgccg                                                                  >  2:2537822/1‑135 (MQ=17)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                 >  2:4612923/1‑140 (MQ=255)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                 >  2:2472659/1‑140 (MQ=255)

                                                                           gCTGGACCAGCCGGAGCGACGGGAGCCACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGagcgacaggagcgacagg                                                                 <  1:2760047/140‑1 (MQ=255)

                                                                             tGGACCAGCCGGAGCGACGGGAGCGACCGGAGCTACCGGGGCCGCCCGACCAGCCGGAACAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                               <  2:353067/140‑1 (MQ=17)

                                                                             tGGACCAGCCGGAGCGACGGGAGCGACAGGAGCAACCGGGCAAGCCGGACCAGCCGGAGCCACCGGAGCGACTGGCGCCACCGGAGCAGCCGGCGACGCCGGACCTCCCGGAGCAGCCGGACcgaccggagcgacgggag                                                               >  1:2548770/1‑140 (MQ=12)

                                                                             gggcccAGCCGGCGCTCCGGGAGCGACCGGAGCTCCCGGGGCAGCCGGACCAGCCGGCCCACCCGGAGCGACGGGAGCCACGGGTGCTCCCGGGGACGCCGGACCAGCCGGACCAACCGGAGcgacaggagcgacaggag                                                               <  2:3791651/136‑1 (MQ=17)

                                                                                accacacGGAGCGACGGGAGCCACTGGAGCCACCGGCGCTCCCGGCCAAGCCGGACCACCCGGCGCGACTGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTa                                                            <  1:1633394/134‑1 (MQ=14)

                                                                                aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGGACACACGGACCGACCGGAGCGACGGGGCCCACGGGGGCAACCGGGGACGCCGGAACAGCCGGACCGACCGGGGGGGCGGGAGCGCCGGGCGCtc                                                            >  2:2939541/1‑139 (MQ=9)

                                                                                aCCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCAACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCtc                                                            >  2:40228/1‑139 (MQ=255)

                                                                                   aGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAagccggaccagccggac                                                                                          <  1:526110/107‑1 (MQ=255)

                                                                                    gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACTGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCgg                                                        <  2:5351014/140‑1 (MQ=255)

                                                                                    gCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcga                                                                     <  1:7717381/127‑1 (MQ=255)

                                                                                         cgCGACGGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACGGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                   <  1:5779375/139‑1 (MQ=255)

                                                                                         aGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAg                                                   >  1:2914019/1‑140 (MQ=255)

                                                                                              cGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                              >  1:3245621/1‑140 (MQ=255)

                                                                                               gggAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGCGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACCGGAGATACCGGGGAAGCCGGAc                                             >  2:5077106/1‑140 (MQ=17)

                                                                                                  agcctcgggAGCTACGGGTGCAGGCGGACCCGCCGGACCACGCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACGGGAGGGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAg                                          <  2:6487260/133‑1 (MQ=14)

                                                                                                   gCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                         <  1:679252/140‑1 (MQ=255)

                                                                                                      actggAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      <  2:2089252/137‑1 (MQ=255)

                                                                                                      actggAGCACCCGGCGAAGCCGGACCAGCCGGACCACCCGGAGCGCCGGGAGCCACCGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      <  2:3505571/137‑1 (MQ=14)

                                                                                                      accggAGCTACCGGGGCAGCCGGACCACCAGGACCATCCGGAGCCACGGGAGCCACCGGAGCTCCCGGGGAAGCAGGACCAGCCGGACCACCCGGAGAGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      <  2:3612337/137‑1 (MQ=14)

                                                                                                      aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCCACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTCCCGGGGACGCCGGACCAGCCgg                                      >  2:5261835/1‑140 (MQ=255)

                                                                                                      aCAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      >  2:5422816/1‑140 (MQ=255)

                                                                                                      aCAGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                      <  1:3090161/140‑1 (MQ=255)

                                                                                                      aCAGGAGCGACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACGGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGCAGCCGGACCAGCCgg                                      <  2:428699/140‑1 (MQ=255)

                                                                                                           aGCGACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcga                                 <  1:4733504/140‑1 (MQ=255)

                                                                                                           aGCGACCGGCGACCCCCGCCCAGCCCGACCATCAGGAGCCACCGGAGCCACGGGAGCGACCGGGGATGCCGGACCAGCCGCACCATCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcga                                 <  2:516510/140‑1 (MQ=14)

                                                                                                            gccaCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgac                                <  1:1044017/137‑1 (MQ=255)

                                                                                                            gCTCCCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgac                                <  1:4253615/140‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGAGCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  2:6209131/140‑1 (MQ=255)

                                                                                                               aCCGGGGAAGCCGGACCAGCCGCACCAACCGGCGCGACGGGAGCCACGGGAGCTACCGGGGACGCCGGACCAGCCGGACCAACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacagg                             <  1:785236/140‑1 (MQ=255)

                                                                                                                 cGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgac                                >  2:4122310/1‑135 (MQ=255)

                                                                                                                     gAAGCCGGACCAGCCGGACCACCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgac                       <  1:6303178/140‑1 (MQ=255)

                                                                                                                      aaGCGGGACCAGCCTGACAAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCACCCGGACCAACGGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggcgcgaca                      <  1:6056906/140‑1 (MQ=17)

                                                                                                                        gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgaccgg                    >  2:4880320/1‑140 (MQ=255)

                                                                                                                        gccggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCggagcgacaggagcgcccgg                    >  1:3956480/1‑135 (MQ=255)

                                                                                                                        cccggaccacccggacccACCGGCGCGACCGGAGCCACGGGAGCTACCGGCGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacagg                    <  2:2365676/139‑1 (MQ=17)

                                                                                                                          cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                  >  2:5593725/1‑140 (MQ=255)

                                                                                                                          cggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggag                  >  1:1114781/1‑140 (MQ=255)

                                                                                                                           ggaccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgaccggagcgacaggagc                 >  2:4828696/1‑140 (MQ=255)

                                                                                                                              ccagccggaccaCCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  1:659848/140‑1 (MQ=255)

                                                                                                                              ccagccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCggagcgacaggagcgacaggagcgac              <  1:7513933/140‑1 (MQ=255)

                                                                                                                                 gccggacccAGCGTCGGGACGGGAGCCTCGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCACCCGGAGCGACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGagcgacaggagcgacaggagcgacagg           <  2:6342559/140‑1 (MQ=17)

                                                                                                                                 gccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCggagcgacaggagcgac                                                                    >  2:1480625/1‑83 (MQ=255)

                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgaccggcgcgaccgga          >  1:1258742/1‑140 (MQ=255)

                                                                                                                                  ccggaccaACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAgcgacaggagcgacaggagcgacagga          >  1:5192267/1‑140 (MQ=255)

                                                                                                                                      accaccCGGAGCGACGGGCGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTa      <  2:6827070/140‑1 (MQ=255)

                                                                                                                                          aCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                             <  1:2321658/97‑1 (MQ=255)

GCCACGGGAGCTACTGGGGAAGCTGGACCAGCCGGACCAGCCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCTGGACCAGCCGGAGCGACGGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACGGGAGCCACGGGAGCTACCGGGGAAGCCGGACCAGCCGGACCAACCGGAGCGACAGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACAGGAGCGACAGGAGCTACCGG  >  NZ_CP034943/607221‑607498

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`