BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,671	C→G	8.0%	P172A (CCA→GCA)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,671	0	C	G	8.0%	764.4 / 43.2	303	P172A (CCA→GCA)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base C (159/115); new base G (11/15); total (172/131)
Fisher's exact test for biased strand distribution p-value = 1.48e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 304 total aligned reads displayed.

AGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA  >  NZ_CP034943/607532‑607809

       tccGGCGAAGCCGGTGCACCGGGTGCCTCCGGAGCCACAGGCGCAACTGGCGAACCAGGACCACCCGGAGCCACAGGAGCTCCCGGTGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                     <  1:2058935/139‑1 (MQ=2)

       aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACTGGGGCTAAAGGGGAATCCGGACCAGCCGGAGCGACAGGACCAACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGAAGCACCCACCgg                                                                                                                                     >  1:2201335/1‑140 (MQ=17)

       aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGCAGCGGGAGCAACCgg                                                                                                                                     >  1:3417981/1‑140 (MQ=17)

       aCCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCGCCGGAGCGACCGCAGCGACCGGGGAAGCCGGACCAACCgg                                                                                                                                     >  1:624224/1‑140 (MQ=255)

       aCCGGGGAAGCCGGACCAGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGACGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGGGCACCAGGACCagcagg                                                                                                                                     >  2:2767785/1‑135 (MQ=11)

             ccccccGCACCAGCCGGCGCCCCCGGAGCCCCAGGACCAGCAGGAGACGCCGGACCACCGGCAGCCACAGGAGCTACCGGGCAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGAc                                                                                                                               <  2:6634342/136‑1 (MQ=2)

             caaGCCGGACCTGCCGGCGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGAc                                                                                                                               <  2:6932062/139‑1 (MQ=255)

                  cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTCCGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAg                                                                                                                          <  1:2953505/140‑1 (MQ=255)

                  cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGCGCGACAGGAg                                                                                                                          >  2:1668725/1‑140 (MQ=17)

                  cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCGGGAGCAGCCGGAGGGAGAGGAGCGACCGGGGAAGCGGGGCCGCCCGGAGCGCCGGGAg                                                                                                                          >  2:2988151/1‑140 (MQ=17)

                  cGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGATGCCGGACCAAGCGGAGCGACAGGAg                                                                                                                          >  2:6331283/1‑140 (MQ=255)

                     aCCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCTGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTa                                                                                                                       <  2:4351153/140‑1 (MQ=255)

                          ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACCggg                                                                                                                  >  1:7518088/1‑140 (MQ=255)

                          ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                  <  1:6694291/140‑1 (MQ=255)

                          ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                  >  1:5790553/1‑140 (MQ=255)

                          ccGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCggg                                                                                                                  <  2:4472224/140‑1 (MQ=255)

                                   cGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                                                         >  1:3136927/1‑140 (MQ=255)

                                    gggATCCACAGGCGCTACTGGGTCAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                        <  2:6811156/140‑1 (MQ=11)

                                    gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                        <  1:2706624/140‑1 (MQ=255)

                                    gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                        >  1:3922388/1‑140 (MQ=255)

                                    gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAc                                                                                                        >  1:5312208/1‑140 (MQ=255)

                                    gggAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCAGGACCACCCGGAGCGCCCGGAGCTACCGGGGAAGCCGGAc                                                                                                        >  2:67128/1‑140 (MQ=255)

                                        gcgaccggggCTACGGGGGAAGCCGGAGCCGCCGGAGCGACAGGTGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGc                                                                                                    <  2:1163429/134‑1 (MQ=11)

                                          cacaGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACGCGGAGCGACCGGAGCAACCGGGGAGGCGGGAGCAGACg                                                                                                  >  2:1751019/1‑140 (MQ=14)

                                          cacaGGGGCTACTGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCg                                                                                                  >  2:3890964/1‑140 (MQ=255)

                                           ccaGCGGCGACGGGGCAAGCCGGCCCACCCGGAGCGCCAGGAGCGACCGGGGAAGCCGCACCAGCCGGAGCGACCGCAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                 <  2:4103401/139‑1 (MQ=14)

                                            caGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGa                                                                                                >  2:1235228/1‑140 (MQ=255)

                                                 gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                       >  1:4346376/1‑96 (MQ=37)

                                                 gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAcc                                                                                                                                       <  2:4346590/96‑1 (MQ=37)

                                                 gCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGAc                                                                                           <  1:3841069/140‑1 (MQ=40)

                                                  cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGGGACAGGGAAAGCAGTACCAGCCCGAGCGACCGGAGCAAACGGGGAATCCCGACCAACCGGAGCGACAGGAGCTACGGGGGGAGCCGGGCGAGCCGGCGGGAcc                                                                                          >  1:3975513/1‑139 (MQ=9)

                                                  cTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACa                                                                                          >  2:4855992/1‑140 (MQ=40)

                                                    aCTGGGGACGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCGACAGGGGAAGCCGCACACGGCGGAGCGACAGGAGCTACCGGGGCTGCCGGGGCGGCCGCGGCGACggg                                                                                        >  2:1958747/1‑140 (MQ=11)

                                                    aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                     >  1:1550330/1‑95 (MQ=37)

                                                    aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCgg                                                                                                                                     <  2:1550289/95‑1 (MQ=37)

                                                    aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAgg                                                                                        >  2:6113563/1‑140 (MQ=255)

                                                    aCTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGCAGCTACAGGAGCGACCGCGGACGCCGGACCAGCCGGAGAGACAgg                                                                                        >  2:7645203/1‑140 (MQ=14)

                                                          gAAGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACAGGGGAAGCCGGACCAGCCGGAGCGACAGCAGCtcc                                                                                  >  2:7438154/1‑138 (MQ=255)

                                                          gAAGCCGGTCCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCTGCCGGAGCGACAGGAGGTAGGGGGGGAGCCGGACCAAGCGGAGCGCCAGGTGCTCCCGGGGCAGCCGGGCGAGAGGGAGCGAGAGGAGCTAc                                                                                  >  2:3632714/1‑140 (MQ=14)

                                                           aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                   >  1:5467149/1‑122 (MQ=38)

                                                           aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGcc                                                                                                   <  2:5467149/122‑1 (MQ=38)

                                                           aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTAcc                                                                                 >  2:927265/1‑140 (MQ=255)

                                                           aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGACGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTAcc                                                                                 >  2:2094923/1‑140 (MQ=255)

                                                           aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGAACAGCCGGAGCGACAGGAGCTACCGGCGACTCCGGAACAACCGGAGCGACAGTAGCTCCCGGGGCAGCCGGAGCAGACAGAGCGACAGGaacacac                                                                                 >  2:1118453/1‑134 (MQ=14)

                                                             cccGGACCACCCGGAGCCCCAGGAGCTCCCGGCGACCCCGGAGCACCCGGAGCGACAGGAGCACCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgg                                                                               <  1:4376731/139‑1 (MQ=14)

                                                              cgggACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCggg                                                                              <  1:1444590/138‑1 (MQ=255)

                                                               cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCgggg                                                                             <  1:127254/140‑1 (MQ=255)

                                                                  aCCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGCTCGACAGGAGCTAGCGGGGATGCCGGACGTTGCGGTGAGAGTGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAg                                                                          <  1:4580674/140‑1 (MQ=14)

                                                                   ccACCCGGAGATACAGGAGCTCCCGGGGACCCCGGACCAGCCGGAGCCCCAGGAGCTACCGGAGAAGCCGGACCAACCGGAGCGACAGGCGCTACCGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGc                                                                         <  1:2532430/140‑1 (MQ=14)

                                                                      gCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCgg                                                                                                 <  1:6732857/113‑1 (MQ=39)

                                                                           aGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCaa                                                                 >  1:6603823/1‑140 (MQ=255)

                                                                                     gCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAACCGGAGCGAc                                                       >  2:6724768/1‑140 (MQ=255)

                                                                                      cTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACg                                                      <  1:1742167/140‑1 (MQ=40)

                                                                                        aCCGGGGAAGCCGGACGAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACGGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGACGGACCAACCGGAGCGACggg                                                    <  1:7434327/140‑1 (MQ=255)

                                                                                        aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACggg                                                    >  2:4212782/1‑140 (MQ=255)

                                                                                        aCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCAACCGGGGAAGCAGGAACAGCCGGAGCGGCCTGAGCTCCACGCGAAGCGGGTCCAACCGGAGCGACcgg                                                    >  2:3806238/1‑140 (MQ=14)

                                                                                         ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACCGGAGCAACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAACAGGAGCGACGCGa                                                   >  2:310107/1‑140 (MQ=14)

                                                                                         ccGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCCGCCGGACCAGCCGGAGCGACCGGAGCGACCGGGGAAGCCGGAGCAACCGGAGCGACGGGa                                                   >  2:1986010/1‑140 (MQ=14)

                                                                                          cGGTGAAGCCGGACCAGCCGGAGCGCCAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAg                                                  <  1:6901642/140‑1 (MQ=255)

                                                                                          cGGGGCAGCCGGACCACCCGGAGCGACAGGAGCTACCGGCGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCGGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAg                                                  <  1:2008807/140‑1 (MQ=255)

                                                                                              gccgCCGGACCAGCCGGAGCGACAGGCGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  2:6522067/137‑1 (MQ=255)

                                                                                              gcaGCCGGACCCGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  1:3647261/138‑1 (MQ=255)

                                                                                              gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGTAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  1:2585729/140‑1 (MQ=255)

                                                                                              gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAg                                                                                               <  1:4092974/91‑1 (MQ=37)

                                                                                              gAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  2:5312208/140‑1 (MQ=255)

                                                                                              gAACCCGGACCACCCGGAGCAACAGGACCTCCCGGGGCCGCCGGACCAACCGGAGCGACAGGAGCTCCCGGCGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  1:1345719/140‑1 (MQ=14)

                                                                                              caacccGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcac                                              <  2:4804837/136‑1 (MQ=255)

                                                                                               aaGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCcaca                                             <  1:5901535/140‑1 (MQ=255)

                                                                                                 gCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGACGCCGGACCAGGCGGAGCGGCCGGAGCGACCGGGGGCGCGGGAGCGTCCGGACCGCCGGGAGcgggagg                                           >  1:7218606/1‑134 (MQ=11)

                                                                                                 cccGGAGCACCCGGCGCCCCCGGACCTACCGGCGCAACCGGAGCCACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAgg                                           <  1:5171744/139‑1 (MQ=14)

                                                                                                   cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACGGGCGCCGCCGGCACAGCCGGAGCGCCGGGAGcccacgccg                                         >  2:5260600/1‑133 (MQ=11)

                                                                                                      accccacGGAGCTCCCGGAGCCACCGGCGCCACCGGACCAACCGGAGCCCCAGGAGCTCCCGGCCCAGCCGGACCCCCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa                                      <  2:896402/134‑1 (MQ=9)

                                                                                                      aCCAGCGGGAGCCCCAGGAGCTACCGGCGACGCCGGAGCTCCCGGGGCGACAGGAGCTCCCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGATACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa                                      <  2:2174182/140‑1 (MQ=14)

                                                                                                      aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGCCGCCGGCCCAGCCGGAGCCGCAGGAGCGACCGGGGCCGCCGGAGCCACCGGGGCGCCGGGAGCCCCCGGGGcca                                      >  2:54019/1‑138 (MQ=14)

                                                                                                      aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGCACCCGGACCAACCGGAGCGACGGGAGCCACAGGGGcga                                      >  2:3956117/1‑138 (MQ=255)

                                                                                                      aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTa                                      >  2:7228967/1‑140 (MQ=255)

                                                                                                      aCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGCGCGACGGGAGCCACAGGGGcgc                                      >  2:4422867/1‑138 (MQ=255)

                                                                                                         aGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAAACGGAGCGACGGGAGCCACAGGGGCAAcgg                                   >  2:3703364/1‑138 (MQ=255)

                                                                                                           cggcaGCGACAGGAGCTACCGGGGAAGCCGGACCCACCGGAGCGACAGGTGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                 <  2:5771556/136‑1 (MQ=255)

                                                                                                           ccGGTGCGACAGCAGCGACCGGGGCATCCGGAACAACCGGAGCGACATGAGCTACCGTTTATGCCGGACCAGCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTggg                                 <  1:335859/140‑1 (MQ=17)

                                                                                                                            cccGGGGAAGCCGGACCTACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACTGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCgg                <  2:1286250/139‑1 (MQ=255)

                                                                                                                            aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGACGCCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGCCCAACCGCAGCGACGGGAGCGACAGGGGCTACAGGGGACGGCGGACCAGCCgg                >  2:5131697/1‑140 (MQ=17)

                                                                                                                            aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGa                                                                     <  1:962778/87‑1 (MQ=38)

                                                                                                                               ggggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGc             >  1:4921171/1‑140 (MQ=255)

                                                                                                                                 ggAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACGGGGGACGTCGGACCAGCCGGAGCGa           >  1:926471/1‑140 (MQ=255)

                                                                                                                                 ccaccccGGACCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGa           <  1:1024975/135‑1 (MQ=17)

                                                                                                                                  gcaGCCGGAGCAACGGGAGCGACAGGAGCTACCGCCGAAGCCGCACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGAc          <  1:5948355/138‑1 (MQ=21)

                                                                                                                                  gAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGACCGGGGAAGCCGGACCAACCGGAGCGCCGGGAGCCACAGGGGCTACGGGGGACGTCGGACCAGCCGCAGCGAc          >  2:3355844/1‑140 (MQ=255)

                                                                                                                                    aaccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAg        >  2:2718191/3‑140 (MQ=14)

                                                                                                                                     gCCGGACCAACCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCGCCCGGGGACGCGGGACCTACCGGTGCGACGGGAGCCAAAGCTCCAACGGGGGAAGGCGGAACAGGCGCAGAGACatg       >  2:2613489/1‑138 (MQ=2)

                                                                                                                                     gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACAAACCGGAGCGACGGGAGCGACAGGGGCAACGGGGGACGTCGGACCAGCCGGAGCCACAgc       >  2:5954636/1‑139 (MQ=18)

                                                                                                                                     gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       <  2:1494821/140‑1 (MQ=255)

                                                                                                                                     gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       >  1:1494821/1‑140 (MQ=255)

                                                                                                                                     gCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGCGCTACTGGGGACGTCGGACCAGCCTGAGCGACAgg       >  1:7058299/1‑140 (MQ=255)

                                                                                                                                     accGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGTGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       >  2:5171479/2‑140 (MQ=14)

                                                                                                                                     accGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       >  2:701367/2‑140 (MQ=14)

                                                                                                                                     accGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAgg       <  1:4423127/139‑1 (MQ=14)

                                                                                                                                         gACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCt   <  1:5260997/140‑1 (MQ=255)

                                                                                                                                          aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa  >  2:7300613/1‑140 (MQ=255)

                                                                                                                                          aCCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTa  >  2:1413417/1‑140 (MQ=255)

AGGAGCTACCGGGGAAGCCGGACCAGCCGGGGCCACGGGAGCCACAGGGGCTACTGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTA  >  NZ_CP034943/607532‑607809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`