BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NZ_CP034943	607,844	C→G	7.3%	A229A (GCC→GCG)	EO946_RS03185 →	collagen‑like protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NZ_CP034943	607,844	0	C	G	7.3%	2021.2 / 105.0	628	A229A (GCC→GCG)	EO946_RS03185	collagen‑like protein
Reads supporting (aligned to +/- strand): ref base C (249/330); new base G (18/29); total (268/360)
Fisher's exact test for biased strand distribution p-value = 6.46e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 634 total aligned reads displayed.

GACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTACACATGC  >  NZ_CP034943/607705‑607981

 aCCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCa                                                                                                                                          >  2:90097/1‑140 (MQ=255)

     gCCGGAGCGCCCCCAGCTACCGGGGAAGCCGCACCACCCGGAGCGACGGGAGCCACAGGGGCGACTGGGGACGCCGGACCAGCCGGAGCCACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACagg                                                                                                                                      <  1:4683107/140‑1 (MQ=14)

      ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGa                                                                                                                                     >  1:1040444/1‑140 (MQ=255)

       cGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAg                                                                                                                                    >  2:447571/1‑140 (MQ=255)

          aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGccc                                                                                                                                 >  2:663427/1‑139 (MQ=255)

          aGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCca                                                                                                                                 >  2:7072057/1‑140 (MQ=255)

              gccggagcgccaggagcgaccggggaagccggaccacccgtagcgacgggagccacaggggctacgggggaagtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGAGCcacagg                                                                                                                             <  1:2988151‑M2/15‑1 (MQ=255)

              gccggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGAGCcacagg                                                                                                                             <  1:7575270‑M2/15‑1 (MQ=255)

              cccggagccacagcagctaccggtgaccccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGAGCcacagg                                                                                                                             <  1:1113615‑M2/15‑1 (MQ=255)

              actggAGCTACCGGGGCCGCCGGACCAAGCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacagg                                                                                                                             <  1:5169453/137‑1 (MQ=255)

              aCAGGAGCGACCGGGGAAGCCGGACCACCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGAAGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacagg                                                                                                                             <  1:4080335/140‑1 (MQ=255)

               cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggc                                                                                                                            >  2:5565968/1‑140 (MQ=255)

                cggagcgaccggagctaccggggaagccggaccacccggagcgacgggagccacaggggctacgggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGAgccacagggg                                                                                                                           <  1:5832401‑M2/17‑3 (MQ=255)

                aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCCCGGGAGCcacaggca                                                                                                                           >  2:2741815/1‑140 (MQ=255)

                aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggca                                                                                                                           >  1:2541626/1‑140 (MQ=255)

                 ggagcgacaggagctaccggggaagccggaccaaccggagcgacgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGagccacaggggc                                                                                                                          <  1:5704923‑M2/18‑4 (MQ=255)

                    gCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggcacagg                                                                                                                       <  2:7334623/140‑1 (MQ=255)

                      tACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGag                                                                                                                     <  1:6742508/140‑1 (MQ=255)

                         cGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGCCCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGagcag                                                                                                                  <  1:168127/140‑1 (MQ=255)

                          ggggAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGagcagc                                                                                                                 <  2:2856865/140‑1 (MQ=255)

                          ggggAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGagcagc                                                                                                                 <  2:3995624/140‑1 (MQ=255)

                             gAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACgg                                                                                                                                       >  2:1548851/1‑115 (MQ=255)

                             gAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTgg                                                                                                              >  2:2992517/1‑140 (MQ=255)

                             gAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTgg                                                                                                              >  2:5144615/1‑140 (MQ=255)

                                  cGGACCCCCCCGACCGACGGGAGCCCCAGGGGCTTCTGGGGACGCCGGACCAGCCGGAGCGCCAGGAGCTACCGGGGAAGCCGGACCAACCGCAGCCACAGGCGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAt                                                                                                         <  2:7022677/140‑1 (MQ=18)

                                  cGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAt                                                                                                         <  2:1673794/140‑1 (MQ=255)

                                  cGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTAt                                                                                                         <  2:721103/140‑1 (MQ=255)

                                       cAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGaa                                                                                                    <  1:54518/140‑1 (MQ=255)

                                         ccgggtgCGACGGGATCCTCAGGGGATACTGTGGACGTCGTACAAGCCGGAGCTACAGGAGCTACCGGGGAAGCGGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCATCTGGGTTATCCGAATa                                                                                                  <  1:5087430/134‑1 (MQ=21)

                                         aCCGGCCCGACGGGAGAGTCAGCGGCTCCGGGGGACGCCGGAGCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  2:5388278/140‑1 (MQ=21)

                                         aCCGGAGCGTCGGGAGACAGAGGGGCTACTGGGGACTTCGGACCAGCCGGAGCGACCGGAGCTACCGGGGAAGCCTGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  1:6637348/140‑1 (MQ=25)

                                         aCCGGAGCGCCGGGAGCCACAGGGGCTACTGGGGACGTCGGCCCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  1:868399/140‑1 (MQ=255)

                                         aCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  2:3401882/140‑1 (MQ=255)

                                         aCCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  2:1467322/140‑1 (MQ=255)

                                         aCCGGAGCGACGGCAGCCACAGGGGCTACTGGGTACGTCTGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  2:1813750/140‑1 (MQ=255)

                                         aCCGGAGCGACCGGAGCCAGAGGTGAGACTGGGGACGGGGGTCCCGCCGTAGCGACAGCACCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  1:4421474/140‑1 (MQ=21)

                                          ccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATAc                                                                                                 >  1:6581634/1‑140 (MQ=255)

                                          ccGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATAc                                                                                                 >  1:3180181/1‑140 (MQ=255)

                                              cgCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             <  1:7182675/139‑1 (MQ=255)

                                              cgCGACGGGAGCCACAGGGGCTACTGGGGACGGCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             <  1:6328436/139‑1 (MQ=255)

                                              aGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             <  1:2888938/140‑1 (MQ=255)

                                              aGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             <  1:310107/140‑1 (MQ=255)

                                                cGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGtat                                                                                           <  2:6097225/140‑1 (MQ=255)

                                                    gggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACCGGCACAGGAGCAGCTGGGTTATCCGAATACGGGtctctat                                                                                       >  1:3988142/1‑140 (MQ=255)

                                                    gggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGtatctat                                                                                       >  1:4284138/1‑140 (MQ=255)

                                                     ggAGCGACAGGAGCTACCGGGGAAGTCGGACCATCCGGATCGACAGGAGCTACCGGGGAAGCCGGACCATCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGtatatata                                                                                      <  1:4196922/140‑1 (MQ=21)

                                                     ggAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGtatatata                                                                                      <  1:4528657/140‑1 (MQ=255)

                                                            cgggagccacaggggctactggggacgtcggaccagccggagcgacaggagctaccggggaagccggaccaaccggagcGACGGGAgccacagggg                                                                                                                           <  1:3550752‑M2/17‑3 (MQ=255)

                                                                  cTACTGGGGACGTCGGACCAGCCGGAGCAACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  >  1:3925332/1‑115 (MQ=255)

                                                                    aCTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCa                                                                       >  2:6354450/1‑140 (MQ=255)

                                                                       ggggcagTCGGACCAGCCGGAGCGACTGGAGCGACCGGCGAAGCCGGAGCACCCGGAGCGCCAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAAc                                                                    <  1:2222456/134‑1 (MQ=37)

                                                                       ggggTCTTCGGACGAGGCGGATCGTCTCGAGCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAAc                                                                    <  2:5800946/140‑1 (MQ=37)

                                                                          gACGTCTGAACAGCAGGAGCGACAGGAGCAACCTGGGACGCAGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAACTGGGTTATCCGAATACGGGTAGATATATAACTTAAGCGCTCAAACgtt                                                                 >  2:1243077/1‑138 (MQ=37)

                                                                          gACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             <  1:971669/112‑1 (MQ=255)

                                                                          gACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGt                                                                 >  2:5262638/1‑140 (MQ=255)

                                                                          gACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGt                                                                 >  2:3167705/1‑140 (MQ=255)

                                                                          gACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATAGATATAACTTAAGCGCTCACACGGt                                                                 >  2:4961030/1‑140 (MQ=255)

                                                                           aCGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacagg                                                                                                                             <  1:2470658/79‑1 (MQ=255)

                                                                           aCGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacagg                                                                                                                             >  2:2470658/1‑79 (MQ=255)

                                                                           aCGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTa                                                                >  2:2323217/1‑140 (MQ=255)

                                                                           aCGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTAGATATATAACTTAAGCGCTCAAACGGTa                                                                >  2:5713800/1‑140 (MQ=255)

                                                                             gccGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACgg                                                                                                                                       <  1:1188563/65‑1 (MQ=25)

                                                                             gTCGGACCAGCCGGGGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGc                                                              >  1:1573888/1‑140 (MQ=255)

                                                                             gTCGGACCAGCCGGAGCGACAGGAGCTCCCGGGGAAGCCGGACCAACCGGAGCGACAGGCGCCACGGGAGCCACAGGCACAGGCGCAGCTGGGGTATCCGAATACGGGTCTATCTATAACTTAAGCGCTCAAACGGTCGc                                                              >  1:1484168/1‑140 (MQ=37)

                                                                             gTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGACTACGGGTATATATATAACTTAAGCGCTCAAACGGTatc                                                              >  2:6495112/1‑138 (MQ=255)

                                                                             gTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGc                                                              >  1:1338302/1‑140 (MQ=255)

                                                                               cGGACCAGCCGGAGCGACAGGAGCTACCGGGGACGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATCCGGGTATATCTTTACCTTAAGCGCTCACACggtaggta                                                            >  1:7256798/1‑140 (MQ=25)

                                                                               cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGGCCAACCGGAGCGACAGGAGCCACg                                                                                                                                        >  2:2089473/1‑64 (MQ=255)

                                                                               cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCcacaggcacagg                                                                                                                       >  1:1915441/1‑81 (MQ=255)

                                                                               cGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGt                                                                                             >  1:4912058/1‑107 (MQ=255)

                                                                                       ccGGAGCGACAGGAGCTACCGGGGAAGTCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAAc                                                                    <  2:3675514/124‑1 (MQ=255)

                                                                                       ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCt                                                    >  1:6216846/1‑140 (MQ=255)

                                                                                       ccGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCt                                                    >  1:7472316/1‑140 (MQ=255)

                                                                                       ccGGAGCGACAGGAGATACCGGGGAAGCCGGACCAACCGGAGCTACAGGAGCCACGGGAGCCACAGGCACACTAGCAGCTGGGTTATCCTAATACGGGTCTATATATAACTAAATCGATCAAACGGTAGCTATAGAGGCt                                                    >  1:5560278/1‑140 (MQ=37)

                                                                                                cAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACgg                                                                                                                                       <  1:2326820/48‑1 (MQ=255)

                                                                                                 aGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACg                                                                   <  2:4275289/115‑1 (MQ=255)

                                                                                                     gCTACCGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGa                                      <  2:3906679/140‑1 (MQ=255)

                                                                                                     gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGa                                      <  1:6439707/140‑1 (MQ=255)

                                                                                                     gCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGa                                      <  1:7438154/140‑1 (MQ=255)

                                                                                                        aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTc                                   >  1:2422551/1‑140 (MQ=255)

                                                                                                        aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTc                                   >  2:1023735/1‑140 (MQ=255)

                                                                                                        aCCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTc                                   >  1:2093201/1‑140 (MQ=255)

                                                                                                          cGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCaa                                 <  1:6894825/140‑1 (MQ=255)

                                                                                                          cGGGGAAGCCGGACCACCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCaa                                 >  2:6894825/1‑140 (MQ=255)

                                                                                                          cGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCaa                                 <  2:2259299/140‑1 (MQ=255)

                                                                                                             ggAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAg                              <  1:531384/140‑1 (MQ=255)

                                                                                                                 gCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGAt                          >  2:7494523/1‑140 (MQ=255)

                                                                                                                    ggACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAac                       <  2:3506481/140‑1 (MQ=255)

                                                                                                                    ggACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAac                       <  1:3802885/140‑1 (MQ=255)

                                                                                                                          aCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCAcccc                 <  2:4793429/140‑1 (MQ=255)

                                                                                                                          aCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCAcccc                 <  1:6094197/140‑1 (MQ=255)

                                                                                                                          aCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCAcccc                 <  1:7072057/140‑1 (MQ=255)

                                                                                                                          aCCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCAcccc                 <  1:1789148/140‑1 (MQ=255)

                                                                                                                           ccGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATa                                                                                                  <  2:7660352/58‑1 (MQ=255)

                                                                                                                           ccGGAGCCTCAGGAGCGACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCa                <  1:3277705/140‑1 (MQ=255)

                                                                                                                               aGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGaa            <  1:3703364/140‑1 (MQ=255)

                                                                                                                                    cAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTaca       <  1:2718191/140‑1 (MQ=255)

                                                                                                                                      ggagcCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGGAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTAcaca     <  1:5954636‑M2/135‑1 (MQ=255)

                                                                                                                                       gagcCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTACACAt    <  2:6216846‑M2/136‑1 (MQ=255)

                                                                                                                                       gagcCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTACACAt    <  1:4614005‑M2/136‑1 (MQ=255)

GACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACGGGAGCCACAGGGGCTACTGGGGACGTCGGACCAGCCGGAGCGACAGGAGCTACCGGGGAAGCCGGACCAACCGGAGCGACAGGAGCCACGGGAGCCACAGGCACAGGAGCAGCTGGGTTATCCGAATACGGGTATATATATAACTTAAGCGCTCAAACGGTAGCTATAGAGGCTGATGTCATTTTTGATTCAACAGGGATAACCACCCCAGGAATTACACATGC  >  NZ_CP034943/607705‑607981

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`