| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 634,052 | T→G | 15.5% | E573D (GAA→GAC) | EO946_RS03330 ← | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 634,052 | 0 | T | G | 15.5% | 627.7 / 44.5 | 324 | E573D (GAA→GAC) | EO946_RS03330 | ABC‑F family ATP‑binding cassette domain‑containing protein |
| Reads supporting (aligned to +/- strand): ref base T (91/172); new base G (59/2); total (150/174) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.13e-21 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 339 total aligned reads displayed.
GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAA > NZ_CP034943/633914‑634187 | gTCTTCATGGATGGTTTGTACATTTTCATTTTCTTGATAGATTTCCTGATAACATAGCAATTCTTATTTATTACTAATGTTTTCTTCAATGGTTTTTACATTTTATTCTTTTTATTAAATAATACGGAgtcgttgtcgtt < 2:4076493/140‑1 (MQ=255)gTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGtt < 1:5319074/140‑1 (MQ=255) tCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGttc > 1:1531620/1‑140 (MQ=255) cATGGATGGCTTGTACCTTTTCATGGTCATGATAGATTTCCGGATCACATAGCAATACATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATACGACGGAGTCGTTGGCGttctttc > 2:4147172/1‑140 (MQ=255) tggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGttttta > 1:5597559/1‑139 (MQ=255) ggCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTcc < 2:1385767/140‑1 (MQ=255) gCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTGCa > 1:3277983/1‑140 (MQ=255) cTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCAt < 1:3981814/140‑1 (MQ=255) ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGGTTCTTTTTACAtt > 2:1177976/1‑140 (MQ=255) ttGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTGTTTTTCCAtt > 1:4467607/1‑140 (MQ=255) gTACCTTTTCATGGTCTTGATAGATTTCCGGATCACCTAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCt < 2:3599159/140‑1 (MQ=255) gTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCt < 2:5351152/140‑1 (MQ=255) aCCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCttt < 2:912823/140‑1 (MQ=255) ccTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTATCTTTTTCCATGGtttt > 2:6153398/1‑140 (MQ=255) ccTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCtttt > 2:833272/1‑140 (MQ=255) ttttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttc < 1:4858438/140‑1 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTATTTTTGGATTAttttttt > 1:2005641/1‑138 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGTTGTTTGTTTTTGGAGTCtttttgt > 1:5888716/1‑138 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTATTCAATCAGACGGAGTCGTTTGCGTTCTTTATTTTTACATTATTTttct > 2:1946093/1‑140 (MQ=255) tttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAAAAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTCTTTTTCCAATAtttttgt > 2:7099507/1‑138 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTACATTGTTTttctt > 2:2612948/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTCCAATATTTttatt > 1:1668017/1‑140 (MQ=255) ttCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTttctt < 2:7303628/140‑1 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGGGGTGTTTGTTTTTGCATTGTTTTTATTATTAata > 1:4320254/1‑140 (MQ=255) tCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGTTTGTTTTTGCATTCTTTTTGTTGTTAata > 1:1812351/1‑140 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:3423450/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:7571363/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATg < 1:6238887/140‑1 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTCTTTTTCCATTATTTTTATTCTTCATATg > 2:4389242/1‑140 (MQ=255) ttGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCAGACGGAGTCGTTGGCGTTGTTTGTTTTTTCAATATTTTTATTATTCATATg > 2:4570/1‑140 (MQ=255) gATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGaa < 2:7643653/140‑1 (MQ=255) taTTTGCTGATCAGATATCAATTCATCGTTATGAATAATGTTTTTTTCAATGGTTTGATGAGTGGCTTCAATTTATTGAATCCTATGGAGTCGTTTGAGTTCTTTCTTTTTCCATTCTTTTTTTTTTTCTTTTGATCGtt < 2:4507426/139‑1 (MQ=255) gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACCGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt < 2:3762330/140‑1 (MQ=255) gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt < 1:1875003/140‑1 (MQ=255) gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt < 1:848199/140‑1 (MQ=255) gATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCAGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGtt < 1:7678667/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt < 2:6343872/140‑1 (MQ=255) aTTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGttt < 2:7228831/140‑1 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTTCAATCTTTTTGTTGTTCATAATAAAGtttt > 1:1188945/1‑140 (MQ=255) tttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTACATTCTTTTTATTGTTCAAATTAAACtttt > 1:3646447/1‑140 (MQ=255) ttCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTGTTTCGTTTTCCATAATTTTTATTCTTGATAGTGACGttttt > 2:4000634/1‑139 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTCCATTATTTTTATTCTTAATATTAAAGTTTTGa > 2:7113506/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTGTTTCTTTTTACATTGTTTTTCTTATTCATATGTAAGttttta > 2:6615350/1‑138 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTGCTTTGTTTTTGCATTCTTTTTCTTATTAATATGAACGTTTTGa > 2:2394522/1‑140 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGGTTCTTTTTACAATATTTTTATTATTAATATGAAATttttta > 2:6551313/1‑138 (MQ=255) tCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTATTCTTGATATTAACGTTTTGa > 2:3872042/1‑140 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATTTTTTCTTCCATTGTTTGAACAGTGGGTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTTTTCGTCTTCATATGAACGTTTTGAGt < 2:2920643/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCACTGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:4639966/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:2791050/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:5269327/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 2:5608450/140‑1 (MQ=255) cGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTACATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTCCATTCTTGTTCTTCTTCATATGAACGTTTTGAGt < 1:710479/140‑1 (MQ=255) cGGACCACATACCACTTCATCGTTCTGACTAATGTTGTCTTCAATTGTTTGAACAGAGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCGTCATATGAACGTTTTGAGt < 1:6447534/140‑1 (MQ=255) cGGAACACATAGCACTTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACACTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGt < 1:3824466/140‑1 (MQ=255) aTCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTGTTTGTTTTTGCATTGTTTTTGTTGTTCATATGAACGTTTTGTGTAAg > 2:2964689/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGTTCTTTCTTTTTACATTCTTTTTGTTCTTCATATGAACGTTTTTAGTAAGGCGTAACCGAAg > 2:3097879/1‑140 (MQ=255) ttCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTACATTGTTTTTGTTGTTCATATGAAAGTTTTGAGTCAGGCTTAAACGAAg > 2:5129776/1‑140 (MQ=255) aTCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTATTTTTCCATTGTTTTTCTTCTTCATATGAACGTGTTTAGTCAGGCGTAAACCAAGCAg > 2:7052960/1‑140 (MQ=255) cGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTGTTTGTTTTTGCAATGTTTTTGTTGTTGATATTAACCTTTTTATTGAGGCTTAAACCAAGCAggg > 1:6024957/1‑139 (MQ=255) gTTATGACTAATGTTTGCGTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCGTTCATTTTCCATTCTTTTTCTTCTTCATATGCACGTTTTGACTCAGGCTTAACCGAAGCAGGCg < 1:1090621/140‑1 (MQ=255) ttATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTGTTTTTCTTCTTCATATGAACGTTTTGTGTCTGGCTTAACCGTAGCAGGCGt > 2:7394167/1‑140 (MQ=255) aCTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGTTGGTTTTTTTTGGATTGTTTTTGTTTTTGATATTTAAGTTTTTTTTGAGGCTTAAACCAAAGACGCGgttttt > 1:4703443/1‑140 (MQ=255) aaTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCgg < 2:3744438/140‑1 (MQ=255) aaTGTTTTCTTCAATGGTTTGAACAGTGGCGTCAATTTGTTCAATCCGACGGAGTCGTTGGGGGTGTTTTTTTTTTCAATATTTTTTTTGTTGATTATTACGTTTTTTTTAAGGCGTAAACCAAACAGGCGgtttttgag > 1:7316204/1‑137 (MQ=255) aTGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGa < 2:1645214/140‑1 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTTGCGTTCTTTCTTTTTGCATTGTTTTTGTTCTTGATATTAAAGTTTTGAGTCAGGCTTAAACGAAGCAGGCGTTTTTTAGGAt > 2:6121532/1‑140 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTGTTTCTTTTTGCATTCTTTTTCTTCTTCAAATGAACGTTTTTAGTGAGGCTTAACCCAAGCAGGCGTTTTTTAGGAt > 2:1877947/1‑140 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTCTTTATTTTTGCAATCTTTTTCTTCTTCATATGAACGGTTTGGGTCAGGCGTAACCGAATCAGGCGTTTTTTgggtt > 2:6854254/1‑138 (MQ=255) tGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATACGACGGAGTCGTTGGGGTTATTTATTTTTACATTCTTTTTGTTCTTCATATGAACGTTTTTAGTCAGGCTTAAACGAAGCAGGCGTTTTTTGGGAt > 2:3649807/1‑140 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCct < 2:6976183/140‑1 (MQ=255) ttcttcAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGGTATTTATTTTTGCCTTCTTTTTCTTCTTGATATTAAAGTTTTGAGTAAGGCTTAAACCAAGCACGCGTGTTTTCGGATTCct > 2:4719045/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTGTTTTTGCATTGTTTTTGTTGTTCATATTAACGTTTTGAGTGAGGGTTTACCGAATCACGCGTTTTTTTGTATTCCTCTTTGTGTTTCAt > 2:6423837/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTGCCTTCTTTTTCTTCTTCATATGAACGTTTTGAGTGAGGCTTAAACGAACCAGGCGTTTTTTGGGATTGCTCTTTGTGATTAAt > 2:508264/1‑140 (MQ=255) tGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTATTCTTCATATTAACGTTTTGAGTCAGGCTTAAACGAAGAAGGCGTTTTTTAGGAATACTCGTTCTGTTTGAt > 2:2501378/1‑140 (MQ=255) aaCAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTGGGCGGTGGTTATTTTTGGATTATTTTTTTTGTTAAAATTTACGTTTTTATTTAGGCTTAAAAGAACCAGGCGTTTTTTGGGATTGCTGTTTGTGAtttcttt > 1:6731458/1‑135 (MQ=255) aGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtct < 2:3295557/140‑1 (MQ=255) gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc < 1:2600901/140‑1 (MQ=255) gTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTtctc < 1:3507264/140‑1 (MQ=255) tGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGGGGTCTTTGTTTTTCCATTATTTTTCTTGTTAATATGAAAGTTTTTAGTAAGGCGTAAACGAAGCAGGCGTTTTTTAGGATTGCTCTTGCGTATTAAttttatac > 2:3507264/1‑136 (MQ=255) tGGCTTCAATTTCTTCAATCAGACGTAGTCGTATGCGTTGTTTAATTTTCCAATGTTTTTCTTCTTAAAAAGAACGTTTTGACTCAGGCTTAAACGCAGACTGCGGTTTTTAGGATTGCTCTTGCTGATTCAttttgtga > 2:2263162/1‑136 (MQ=255) cTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAAt < 2:2299007/140‑1 (MQ=255) cAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCa < 2:25993/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTGTTTCTTTTTGCCATCTTTTTATTCTTGATATTAACCGTTTGTGTCAGGCTTAAACCAATCAGGCGTTTTTTGGGATTACTCTTGGTGATTGATTTTGGACAAATCAAgctggg > 2:3045453/1‑138 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:7136507/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 1:1329192/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTGTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAgctgct < 2:2090238/140‑1 (MQ=255) ttcAATCCGACGGAGTCGTTGGCGGTGTTTGTTTTTCCATTGTTTTTCTTCTTCATAGGAAAGGTTTTAGTCACGCTTAACCCAAGCAGGCGGTTTTTAGGATTCCGCTTGGTGGTTGATTTTGTACAAATAAAactggg > 2:77104/1‑138 (MQ=255) cAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGctct < 2:2428444/140‑1 (MQ=255) cAATCCGACGGAGTCGTTGGCGTTATTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGctct < 2:1331438/140‑1 (MQ=255) cGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtttt < 2:4636247/140‑1 (MQ=255) cGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGtttt < 2:1284372/140‑1 (MQ=255) cGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCGTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGttttttt < 2:4300202/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:595827/140‑1 (MQ=255) gAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 2:1761212/140‑1 (MQ=255) gAGTCGTGGGCGTTCTTTCTTTGTCCCTTCTTTTTCGTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTtct < 1:4114131/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 1:2417280/140‑1 (MQ=255) tCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 1:972425/140‑1 (MQ=255) tCGTTGGCGTTCTGTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCg < 1:2302183/140‑1 (MQ=255) gTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGta < 2:2810094/140‑1 (MQ=255) tGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGtata < 1:7166542/140‑1 (MQ=255) | GTCTGCATGGATGGCTTGTACCTTTTCATGGTCTTGATAGATTTCCGGATCACATAGCAATTCATCGTTATGACTAATGTTTTCTTCAATGGTTTGAACAGTGGCTTCAATTTCTTCAATCCGACGGAGTCGTTGGCGTTCTTTCTTTTTCCATTCTTTTTCTTCTTCATATGAACGTTTTGAGTCAGGCTTAACCGAAGCAGGCGTTTTTTCGGATTCCTCTTGCTGATTCATTTTCTCCAATTCAAGCTGCTCTGTTTTTTTCTCCGTATAA > NZ_CP034943/633914‑634187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |