| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NZ_CP034943 | 112,660 | C→A | 5.2% | T12K (ACA→AAA) | cysE → | serine O‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP034943 | 112,660 | 0 | C | A | 5.2% | 1928.7 / 24.2 | 673 | T12K (ACA→AAA) | cysE | serine O‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (174/433); new base A (60/2); total (236/437) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.57e-27 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 675 total aligned reads displayed.
ACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACGCCTTATATCT > NZ_CP034943/112521‑112799 | gAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGTATA‑GGAAATCAAAGAGAGAAGGGGGGGGAAGCAGGTGTTGTTTATACTTCTCAAAGACGACAATGATAAAGTGTTCg > 1:6621358/1‑140 (MQ=255) cgcgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGCAGACATTGATACAGTGTTCGATCa < 2:3748390/140‑1 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGCGGCGCTTTTTTTATTTGGGGTAGA‑CGAAATGAAATATTGAATGGGGGGGACGCCTGTGTTTTTTTGAATTCTGTAAGAAACAATTGATACCGTGTTAGGTCAAg > 1:100097/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGATGCGCGGTTTTTATTTGGTGAATA‑GGAAATAAAATATATAAGTGGGGGGCAGCATTTGGTTTTTTTAATGATAAAAAAACACAATGATAAATTGTTCAATaaaa > 1:7107749/1‑139 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGAAGA‑GGAAATCAAATATAGAACTGGGGGGAAGCCTGTGTTTTTTAGAATGCTAAAAGAAGACATTGATACACTGTTCGaaaaaa > 1:5953952/1‑135 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGAAGA‑GGAAAACAAAAAGAGAAGTGGGGGGAACCCAGTGTTTTTTATTATTCTCAAATAAAAAATTGATAAAGTGTTCGATAAAg > 1:7504877/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGT‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTCAAAGAAGACATTGATACAGTGTTAGATCAAg > 2:5136207/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATTCTCAAAGAAGACAATTATAAATTGTTCGATaaaa > 2:5827986/1‑139 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTGTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAATCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTAGATAAAg > 2:2620410/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCGTTTTTTAGTGGGTGACGA‑GGAAATCCAAAAGCTTAGTGGGGGGGAGCATGTGTGGTTTATAATGCTCAAAAAAGACATTGATAAAGGTTTGGATAAAg > 1:958729/1‑140 (MQ=255) cgcgGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCGGTTTTTATTGGGGGTAGA‑TGTCATCCAAAAGTGAAGTGGGGGGAACCCATTGTTTTTTTGGAAGGTCAAATGATACATATATAAATTGTTCGATaaat > 1:4011992/1‑139 (MQ=255) tttAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCca < 2:3080304/140‑1 (MQ=255) tctGTCATGTTTTCATGCCGAGGCGCTTTTTTTATTTGGTGTAGA‑TGGAATCAAATAGAGTAGTGGGGGGAAGGATGTGTTTTTTTGTATGCTCAAAGAAGACCTTGTTAAATTGTTCGATCAAGATCCCGCAGCaagaa > 1:1909300/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGTGAAGA‑GGGAATCAAATAGAGAAGTGGGGGGAAGCCAGTGTTTTTTAGAATTCTCAAAGAAGACATTGTTAAAGTTTTGGATGAAGATCCAGCAGCaagaa > 1:5506279/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGGGTATACGCAAAACAAA‑AGAGCAGGGGGGGGGAGCATGTGTTTTTTTTGATGCGGAAAAAAGACAATGAGAAACTGTTAGGTAAAAATCCACCAGCaacca > 1:2997412/1‑137 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTTTTTGGGGAAGA‑GGAAATAAAAAACAGAAGTGGGGGGAAGCATGTGTTTTTTATAATTCTCAAAGAACACAATTATAAAGTGTTAGATCAAGATACATCACCaagaa > 1:3568391/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTTGGTGTAAA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAATAAGACATTGATACAGTTTTCGATCAAAATACAGCAGCaagaa > 1:5642382/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAATCATGTGTTTTTTAGAATGCTGAAAGAAGACATTGATACAGTGTTAGATCAAGATACAGCAGCaagaa > 2:7580319/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATTCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:7167810/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTATAATGCTCAAAGAATACATTGATACAGTGTTAGATCAATATCCAGCAGCaagaa > 2:3643970/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAAGAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCaagaa > 2:4771010/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCTGTTTTTATTGGGTGAAGA‑GGGAATCAAAAAGAGACGTGGGGGGGAGCATGTGTTTTTTAGAATGCTCCAAGTATACATTGTTAACGTGTTGGATCGAGATCCAGCCGCaagaa > 2:5565106/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCGTTTTTTATTTGGTGTAGA‑GGCAAAAAAAAATATAAGTTGGGGGACGCATGTGTTTTTTTTAATTCTCAAAAAAGAAAATGAAAAAGTGTTCGATAAAAATACAGCAGCaaaaa > 1:1280956/1‑140 (MQ=255) tctGTCATGTTTTCATGCAGAGGCGCGTTTTTTATTTGGGGTATA‑GGTAATAAAATATAGTAGTGGGGGGAATCATGTTTTTTTTTTAAATGTCAAAGTATACAATTATAAATGGTTCGATAAATAACCAGCAGcaacaa > 1:7418886/1‑140 (MQ=255) tCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAATGATACAGTGTTCGATAAAGATACAGCAGCAAGAAGTTa > 2:618411/1‑140 (MQ=255) ttCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGaa < 1:4714143/140‑1 (MQ=255) gtCATGCAGAGGCGCTTTTTATATTGGCTGAAGA‑GCAAACCAAATAGAGAAGGGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATtgtgca < 1:4322063/139‑3 (MQ=255) tCATGCAGAGGCGC‑TTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGt < 1:827684/140‑1 (MQ=255) cTTTTTTTTTTGGGTGTAAA‑AGAAATGAAATACAGAAGTGGGGGGAATCAAGTGTTTTTTAGAAAGATCAAAAAAAACATAGTTACAGTGTTCGATCAATAAACAGCAGCAAGAAGTTATTTTGGAGTGTATTTAAATTa > 2:2792227/1‑140 (MQ=255) cTTTTTTTATTTGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTAAAAGAACAAAATTATACACTTTTCGAACAAAATACAGCATCAAAAAGTTATTTTTAATTGTTTTTAAATTa > 2:6914540/1‑140 (MQ=255) ttttttCTTGGGTGCAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTAtt < 1:5914017/140‑1 (MQ=255) tttttATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 1:3672659/140‑1 (MQ=255) tttttATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 1:2723308/140‑1 (MQ=255) tttttATTGGGTGAAGA‑GGAAATCAAAGAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 2:2294317/140‑1 (MQ=255) ttgttATGGGGTGAAGA‑GGAAATCAACTCGCGAAGTGGGGGCAAGCATGTGTTTTTTAGAATGCTCAACGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGCAGGGATTTTAACTTATTc < 1:3274818/137‑1 (MQ=255) tatttATTGGGTGAAGA‑GGACATCACATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAGTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTc < 2:3550870/138‑1 (MQ=255) ttttCTGGGGAGCAGC‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACAGTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTcc < 1:5109060/140‑1 (MQ=255) tttATTGGGTGAAGA‑GGAAATCAAATAGAGAACTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCg < 2:3250646/140‑1 (MQ=255) ttGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGttt < 2:1346828/140‑1 (MQ=255) tGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:7503797/140‑1 (MQ=255) tGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:2114352/140‑1 (MQ=255) tGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTa < 2:6348808/140‑1 (MQ=255) gggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTAc > 1:2532487/1‑140 (MQ=255) ggTGAAGA‑GGAACTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:4344464/140‑1 (MQ=255) ggTGAAGA‑GGAAATCCAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2279706/140‑1 (MQ=255) ggTGAAGA‑GGAAATCACATAGAGAAGTGGGGGGAAGCATGTGTGTTTTAGAATGCTCAAAGAAGACATTGATACAGTGGTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:2084139/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 2:2953168/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:7216172/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:4609061/140‑1 (MQ=255) ggTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:6083766/140‑1 (MQ=255) gctGAAGC‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACa < 1:5794909/138‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGTGCGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTGTGAAGTGATTTTAACTTATTCCGGTTTACATg < 2:2497325/140‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg > 2:4475933/1‑140 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 2:95929/140‑1 (MQ=255) tGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 1:6992939/140‑1 (MQ=255) agAAGA‑CGAAATCAAAGAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCACAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATg < 2:5400356/139‑1 (MQ=255) a‑gGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCtata < 1:3776408/140‑1 (MQ=255) aaaTCAAATAGAGAAGTGGGGGGACGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGAAACAGTGTTCGATCAATATCCAGCAGCAAGAAGTTATTTTTAAGTGATTTTAACTTATTCCGGTTTACATGCTATATgg > 2:245188/1‑140 (MQ=255) aTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCgg > 1:1723526/1‑122 (MQ=255) aTCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGgc > 2:4650744/1‑140 (MQ=255) tCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGgcg < 2:4268940/140‑1 (MQ=255) aaaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 1:3436589/140‑1 (MQ=255) aaaTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGGGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCa < 1:114874/140‑1 (MQ=255) aTAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATc > 1:1623343/1‑140 (MQ=255) gagaCGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGCAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 1:4193666/140‑1 (MQ=255) gagaAGTGGGGGTAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 1:6840138/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:1637263/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:707755/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:6264141/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:1736151/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:4011992/140‑1 (MQ=255) gagaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGa < 2:1266656/140‑1 (MQ=255) agaAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGAt > 1:2048461/1‑140 (MQ=255) aaGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTg > 2:5655262/1‑140 (MQ=255) aGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGc > 1:4826921/1‑140 (MQ=255) ggggggggAAGCATGTGTTTTTGAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGca < 2:2064305/138‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 2:7367915/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 2:3368087/140‑1 (MQ=255) tGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:3159860/140‑1 (MQ=255) tGGGCGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:2837960/140‑1 (MQ=255) gggggggAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGcac < 1:6389353/139‑1 (MQ=255) ggcaGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCt < 1:6188686/137‑1 (MQ=255) cATGTGTTTTTTAGAATGCTCAAATAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTACGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtata > 1:3601732/1‑140 (MQ=255) cATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTtata > 2:6742509/1‑140 (MQ=255) tgtTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGAtt < 1:7616201/80‑1 (MQ=255) tgtTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTACGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATaaa > 2:4971979/1‑140 (MQ=255) tGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTAt > 2:1199352/1‑140 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 2:4132532/140‑1 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 2:2898124/140‑1 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 1:1397348/140‑1 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 2:6026895/140‑1 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 1:5409374/140‑1 (MQ=255) aagaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCa < 2:7762050/140‑1 (MQ=255) aagaCATTGATACAGTGGTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAACCGAAAATTTTATTTCCTTGCa < 2:1883004/140‑1 (MQ=255) aagaCATTGATACAGTGGTCGATCAAGATCCAGCAGCAAGAAGTGATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAACCGAAAATTTTATTTCCTTGCa < 1:2397650/140‑1 (MQ=255) agaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCAc < 1:4929269/140‑1 (MQ=255) gaCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACg < 1:4439381/140‑1 (MQ=255) aCATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACGc > 2:1414739/1‑140 (MQ=255) ttGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACGCCtt < 2:1042281/140‑1 (MQ=255) tGATACTGTGTTCTATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACGCCTta < 1:6274150/140‑1 (MQ=255) | ACAGAGTGGAACCGCGCGGTTTAAGCGTCTCTGTCATGTTTTCATGCAGAGGCGCTTTTTTTATTGGGTGAAGA‑GGAAATCAAATAGAGAAGTGGGGGGAAGCATGTGTTTTTTAGAATGCTCAAAGAAGACATTGATACAGTGTTCGATCAAGATCCAGCAGCAAGAAGTTATTTTGAAGTGATTTTAACTTATTCCGGTTTACATGCTATATGGGCGCATCGGATTGCACATGCTTTATATAAACGAAAATTTTATTTCCTTGCACGCCTTATATCT > NZ_CP034943/112521‑112799 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |